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Clinical Applications Analyst Jobs in Raleigh, NC

WakeMed

Systems Analyst II, Epic Clinical

Raleigh, NC · On-site

Overview WakeMed is seeking a Systems Analyst II, Epic Clinical Applications to lead the design, build, implementation, optimization, and support of Epic clinical applications. This role serves as a ...

ClinDCast LLC

EHR Epic Analyst

Cary, NC · Remote

Support Epic implementation, configuration, and maintenance for clinical applications. * Collaborate with stakeholders to analyze clinical workflows and optimize system functionality. * Provide ...

WakeMed

Systems Analyst II, Home Health

Raleigh, NC · On-site

As a Systems Analyst II, Epic Clinical Applications, you'll play a key role in enhancing the systems that help our clinicians and staff deliver outstanding outcomes every day. Apply today and help ...

New

STI

Epic Clinical Project Manager :: NC

Durham, NC · On-site

... siloed clinical applications. This project management role will work with other EHR project ... to analyze, plan, and implement the clinical components required for an Epic EHR system. This ...

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All JobsClinical Applications Analyst JobsClinical Applications Analyst Jobs in Raleigh, NC

Clinical Applications Analyst information

See Raleigh, NC salary details

$17

$38

$60

How much do clinical applications analyst jobs pay per hour?

As of Aug 6, 2026, the average hourly pay for clinical applications analyst in Raleigh, NC is $38.69, according to ZipRecruiter salary data. Most workers in this role earn between $30.62 and $44.38 per hour, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a clinical applications analyst?

To thrive as a Clinical Applications Analyst, you need strong analytical skills, a solid understanding of clinical workflows, and typically a degree in healthcare, IT, or a related field. Familiarity with EHR systems (like Epic or Cerner), database management, and certifications such as CPHIMS or Epic Certification are commonly required. Excellent communication, problem-solving abilities, and the capacity to work collaboratively with clinical and technical staff are highly valued soft skills. These qualities are essential for ensuring effective implementation, optimization, and support of clinical applications within healthcare organizations.

What does a clinical applications analyst do?

A Clinical Applications Analyst is responsible for implementing, maintaining, and optimizing healthcare software applications that support clinical workflows. They collaborate with medical staff, IT teams, and other stakeholders to ensure the software meets user needs and complies with industry regulations. Their duties often include troubleshooting system issues, training end-users, and assisting with system upgrades or new implementations. This role is essential for enhancing patient care efficiency through effective use of technology.

What are the typical daily responsibilities of a clinical applications analyst?

Clinical Applications Analysts are responsible for supporting, troubleshooting, and optimizing clinical software systems used in healthcare settings. On a typical day, you may analyze user needs, configure or update applications, train staff, and collaborate with IT and clinical teams to implement new features or solve workflow issues. You'll also participate in user meetings, document processes, and ensure that system upgrades or changes do not disrupt patient care. This role often requires balancing technical problem-solving with clear communication to ensure technology effectively supports clinical operations.

What are popular job titles related to Clinical Applications Analyst jobs in Raleigh, NC? For Clinical Applications Analyst jobs in Raleigh, NC, the most frequently searched job titles are:
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What cities near Raleigh, NC are hiring for Clinical Applications Analyst jobs? Cities near Raleigh, NC with the most Clinical Applications Analyst job openings:
Clinical Applications Analyst jobs near you
Infographic showing various Clinical Applications Analyst job openings in Raleigh, NC as of July 2026, with employment types broken down into 1% Locum Tenens, 1% Internship, 81% Full Time, 11% Part Time, 1% Temporary, and 5% Contract. Highlights an 82% Physical, 5% Hybrid, and 13% Remote job distribution, with an average salary of $80,475 per year, or $38.7 per hour.

Clinical Applications Manager

North Carolina Community Health Center Association

Raleigh, NC • On-site

$82K - $92K/yr

Full-time

Posted 14 days ago

Job description

Please provide current resume and cover letter.

Summary
The North Carolina Community Health Center Association (NCCHCA) is a membership organization for federally qualified, non-profit patient-governed health care organizations that provide care to patients regardless of insurance status or geographic isolation.  NCCHCA’s mission is to promote and support patient-governed health care organizations and the populations they serve. NCCHA holds a cooperative agreement with the Health Resources and Services Administration (HRSA) to operate the Health Center Controlled Network (HCCN) program. NCCHCA also serves as the Manages Services Organization for the Carolina Medical Home Network Clinically Integrated Network (CMHN CIN) and Carolina Medical Home Network Accountable Care Organization (CMHN ACO).

The Clinical Applications Manager provides clinical informatics leadership and serves as a key subject matter expert (SME) for NCCHCA’s HCCN-supported clinical technology platforms. This position supports the implementation, optimization, adoption, and ongoing management of electronic health record (EHR) systems, population health platforms, care management applications, and other clinical technology solutions that enhance health center operations, quality improvement initiatives, care coordination, and value-based care efforts.

Working collaboratively with health centers, vendors, clinical leaders, and internal NCCHCA teams, the Clinical Applications Manager supports effective use and optimization of clinical applications through workflow analysis, system enhancement recommendations, end-user training, change management, and ongoing application support. This position serves as a liaison between clinical users and technology vendors to help identify opportunities for improvement, resolve issues, support system enhancements, and promote best practices across participating health centers.

The Clinical Applications Manager supports NCCHCA’s HRSA Health Center Controlled Network (HCCN) grant activities by coordinating clinical technology initiatives, facilitating collaborative user groups, supporting health IT modernization efforts, and promoting adoption of HCCN-supported solutions. This position assists with tracking project milestones, technology adoption, performance measures, and grant deliverables; collecting required information; and supporting preparation of reports and documentation required to demonstrate progress toward HCCN goals and HRSA requirements.

Qualification Requirements:
  • Bachelor's degree in Nursing, Health Informatics, Healthcare Administration, Health Information Management, Clinical Informatics, or a related healthcare field required.
  • Master’s degree in Nursing Informatics, Health Informatics, Healthcare Administration, or related field preferred.
  • Minimum five (5) years of progressively responsible experience supporting Electronic Health Records (EHRs), clinical applications, healthcare informatics, or clinical operations.
  • Experience implementing, optimizing, and supporting population health and care management platforms.
  • Experience leading clinical workflow redesign, technology optimization, and clinical transformation initiatives.
  • Experience managing healthcare technology projects, including project planning, scope management, timeline development, stakeholder coordination, risk identification, issue resolution, and implementation tracking.
  • Experience using project management methodologies and tools to successfully manage technology implementations, system upgrades, and ongoing optimization initiatives.
  • Experience working directly with physicians, nurses, care managers, quality teams, and healthcare leadership.
  • Experience managing vendor relationships, software implementations, and application support activities.
  • Experience providing end-user training, facilitating user groups, and supporting change management initiatives.
  • Experience in Federally Qualified Health Centers (FQHCs), Community Health Centers, ACOs, CINs, or ambulatory care preferred.

Knowledge, Skills and Abilities:
  • Strong knowledge of Electronic Health Records (EHRs) and ambulatory clinical workflows.
  • Knowledge of population health, care management, referral management, and quality improvement technologies.
  • Understanding of clinical quality measures, UDS reporting, HRSA performance measures, and value-based care programs.
  • Knowledge of healthcare interoperability, data exchange, interfaces, and health information technology standards.
  • Working knowledge of clinical decision support tools and workflow optimization strategies.
  • Knowledge of HIPAA, healthcare privacy, and information security requirements.
  • Ability to analyze complex clinical workflows and recommend technology-based improvements.
  • Excellent project management, organizational, and change management skills.
  • Strong facilitation skills with experience leading end-user workgroups.
  • Excellent written, verbal, and presentation skills.
  • Ability to communicate effectively with clinicians, executive leadership, technical teams, and software vendors.
  • Ability to manage multiple concurrent implementation and optimization projects.

Essential Functions:
Clinical Applications Management:
  • Serve as the clinical informatics subject matter expert (SME) for NCCHCA-supported clinical technology solutions, including Electronic Health Records (EHRs), population health platforms, care management applications, referral management systems, and other clinical technologies.
  • Lead the implementation, optimization, maintenance, and ongoing enhancement of clinical applications to support patient care, operational efficiency, quality improvement, and value-based care initiatives.
  • Analyze clinical workflows and collaborate with participating health centers to identify opportunities for workflow redesign, application optimization, and process improvement.
  • Recommend and implement application configuration changes, workflow enhancements, and best practices that improve clinical documentation, provider efficiency, and patient outcomes.
  • Coordinate software upgrades, application testing, validation, release management, and user acceptance testing to ensure successful deployment of new functionality and system enhancements.
  • Monitor application utilization, adoption, and performance while identifying opportunities for continuous optimization and improvement.
  • Troubleshoot application issues, coordinate issue resolution with software vendors, and communicate updates to stakeholders.
  • Support interoperability initiatives and the effective integration of clinical technologies across participating health centers.

Clinical Technology Implementation & Project Management:
  • Manage multiple concurrent clinical technology implementation and optimization projects, including project planning, timeline development, stakeholder communication, issue resolution, risk management, and implementation tracking.
  • Coordinate implementation activities with participating health centers, software vendors, consultants, and internal NCCHCA teams to ensure successful project execution.
  • Maintain project documentation, implementation plans, meeting summaries, project schedules, and status reports supporting organizational and grant-funded initiatives.
  • Monitor project milestones, deliverables, and technology adoption to ensure timely completion of implementation objectives.
  • Support organizational initiatives focused on healthcare technology modernization, workflow optimization, and clinical transformation.

Training, Collaboration & User Support:
  • Develop and deliver end-user training, workflow documentation, user guides, webinars, and educational resources supporting effective use of clinical applications.
  • Provide ongoing application support and workflow consultation to clinicians, care teams, operational staff, and organizational leadership.
  • Facilitate user groups, workgroups, and collaborative meetings to promote knowledge sharing, identify enhancement opportunities, and encourage adoption of best practices.

HCCN Program Support & Compliance:
  • Support HRSA Health Center Controlled Network (HCCN) initiatives by coordinating clinical technology activities that advance grant objectives and participating health center priorities.
  • Assist with monitoring technology implementation, application adoption, project milestones, and grant deliverables to support HRSA reporting requirements.
  • Collaborate with participating health centers to promote adoption of HCCN-supported technologies, health information exchange, interoperability, and clinical quality improvement initiatives.
  • Maintain documentation supporting clinical application implementations, workflow improvements, training activities, and grant-funded projects.
  • Monitor emerging healthcare technologies, industry trends, and clinical informatics best practices to recommend innovative solutions that improve organizational performance.
  • Perform other duties as assigned.

Physical Demands:
The physical demands described here are representative of those that must be met by an employee to successfully perform the essential functions of this job.  While performing the duties of this job, the employee is
  • Regularly required to stand, sit; talk, hear, and use hands and fingers to handle or feel; and reach with hands and arms to operate a computer and telephone keyboard, and to reach, stoop or kneel
  • Specific vision abilities required by this job include close vision requirements due to computer work
  • Light to moderate lifting is required such as occasionally lifting office products and supplies, up to 20 pounds

Work Environment:
  • This job operates in a professional office environment. This role routinely uses standard office equipment such as computers, phones, photocopiers, filing cabinets and fax machines. 
  • Level of noise typical for the work environment of this job is Moderate - less than 85 decibels (business office with computers and printers and traffic within the receptionist area).
  • Ability to work in a confined area.
  • Ability to sit at a computer terminal for an extended period of time.

The above statements are intended to describe the general nature and level of work being performed by individuals assigned to this job. They are not intended to be an exhaustive list of all responsibilities, duties and skills required of the position.  All employees may have other duties assigned at any time.