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Clinical Application System Administrator Jobs (NOW HIRING)

Application/System Administrator Team: Web Admin Work Site: Patuxent River, MD Work Location: Hybrid. Requires on-site support at Patuxent River, MD approximately 3 days per week. Position Type ...

We are seeking an enthusiastic individual who is a motivated self-starter with experience in business intelligence application system administration. Responsibilities: * Administer and maintain Qlik ...

As Clinical Application Administrator , you will be on the front line of keeping that ... Familiarity with PACS, RIS, or EHR systems and the radiology workflow they support: from order to ...

System Administrator

Virginia, MN · On-site

$107K - $220K/yr

The System Administrator is responsible for the daily operation, maintenance, and security of the ... application system due to a disability. Please send your request tohr@avalore.ai. Avalore is an ...

The System Administrator is responsible for the daily operation, maintenance, and security of the ... our online application system due to a disability. Please send your request to hr@avalore.ai.

System Administrator

Arlington, VA · On-site

$107K - $220K/yr

The System Administrator is responsible for the daily operation, maintenance, and security of the ... our online application system due to a disability. Please send your request to hr@avalore.ai.

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Clinical Application System Administrator information

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$62.5K

$98K

$169.5K

How much do clinical application system administrator jobs pay per year?

As of Sep 12, 2026, the average yearly pay for clinical application system administrator in the United States is $97,965.00, according to ZipRecruiter salary data. Most workers in this role earn between $77,500.00 and $104,000.00 per year, depending on experience, location, and employer.

What does a clinical application system administrator do?

A Clinical Application System Administrator manages and supports the software systems used in healthcare settings, such as electronic health records (EHR) and clinical information systems. They are responsible for installing, configuring, maintaining, and troubleshooting these applications to ensure they run efficiently and securely. Additionally, they work closely with clinicians and IT teams to customize systems according to clinical workflow needs, provide user support and training, and ensure compliance with healthcare regulations. Their role is crucial in maintaining data integrity, system uptime, and patient care quality.

What are the key skills and qualifications needed to thrive as a clinical application system administrator?

To excel as a Clinical Application System Administrator, you need in-depth knowledge of healthcare IT systems, clinical workflows, and a background in computer science or information technology. Familiarity with electronic health records (EHR) platforms like Epic or Cerner, database management, and relevant certifications such as CompTIA Healthcare IT Technician are typically required. Strong analytical skills, attention to detail, and effective communication help you troubleshoot issues and collaborate with clinical staff. These competencies ensure seamless technology integration, minimize disruptions in patient care, and support regulatory compliance within healthcare environments.

What are some common challenges faced by clinical application system administrators, and how can they be addressed?

Clinical Application System Administrators often encounter challenges such as integrating new healthcare software with existing systems, managing system downtimes, and ensuring compliance with healthcare regulations like HIPAA. Addressing these challenges requires strong problem-solving skills, proactive communication with clinical staff, and regular system updates and testing. Administrators also benefit from ongoing training and collaboration with IT and clinical teams to ensure smooth workflows and data security.

What is the difference between Clinical Application System Administrator vs Clinical Data Analyst?

AspectClinical Application System AdministratorClinical Data Analyst
CredentialsIT certifications, healthcare IT experienceData analysis certifications, healthcare data experience
Work EnvironmentHealthcare IT departments, hospitals, clinicsResearch institutions, healthcare organizations, hospitals
Employer & Industry UsageHospitals, clinics, healthcare IT vendorsHealthcare providers, research centers, analytics firms
Search & Comparison IntentUnderstanding IT roles in healthcare systemsAnalyzing healthcare data and reporting

The Clinical Application System Administrator primarily manages and maintains healthcare software systems, ensuring smooth operation and security. In contrast, the Clinical Data Analyst focuses on interpreting healthcare data to support clinical decisions and research. Both roles are vital in healthcare IT but serve different functions within the industry.

What are popular job titles related to Clinical Application System Administrator jobs?

For Clinical Application System Administrator jobs, the most frequently searched job titles are:

Infographic showing various Clinical Application System Administrator job openings in the United States as of August 2026, with employment types broken down into 1% As Needed, 84% Full Time, 12% Part Time, and 3% Contract. Highlights an 92% Physical, 2% Hybrid, and 6% Remote job distribution, with an average salary of $97,965 per year, or $47.1 per hour.

Application/System Administrator

Patuxent River, MD • On-site

DIGITAL ENTERPRISE SOLUTIONS, INC.
IT Services • 51 - 200 employees

$115K - $150K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

This job post has expired today. Applications are no longer accepted.


Key responsibilities

  • Performs the installation, integration, configuration, testing, troubleshooting, and security implementation of software applications, focusing on Windows systems.

  • Provides support through a ticketing system to application owners, developers, and internal/external teams.

  • Maintains operations and sustainment of AWS Cloud-native Services, specifically AWS GovCloud.


Job description

Application/System Administrator
Digital Enterprise Solutions, Inc. (DESI) is seeking a Application/System Administrator to join our team of qualified, diverse individuals. This is a Full-time (Regular) Exempt (Salary) position located in Patuxent River, Maryland 20670 (St. Mary's County Maryland). Candidates must reside within 90 miles of the customer site at Patuxent River, MD 20670 (St. Mary's County Maryland). On-site support is required 3 days per week.
ROLES/ RESPONSIBILITIES:
  • Performs the installation, integration, configuration, testing, troubleshooting, security implementation, and configuration of software applications with specific focus on Windows systems, including:
    • Microsoft Office products
    • Java JRE
    • Visual Studio
    • Raytheon EAGLE
  • Operations and sustainment of AWS Cloud-native Services, specifically AWS GovCloud.
  • Troubleshoot and resolve software issues.
  • Provides support through a ticketing system to application owners, developers, and internal/external teams.
  • Other duties as assigned or required.

EDUCATION/EXPERIENCE REQUIREMENTS:
To be considered for this position, you must meet the education and experience listed below:
  • High School diploma or GED is required.
  • BA/BS or Associates degree and 7 years related experience performing the roles/responsibilities listed above -OR- HS/GED and 9 years related experience performing the roles/responsibilities listed above.
  • Bachelor's or Associates degree in Computer Science, Information Systems or similar is preferred.
  • College degrees must be obtained from an accredited college or university as recognized by the U.S. Department of Education.

MINIMUM QUALIFICATIONS:
To be considered for this position, you must minimally meet the knowledge, skills, and abilities listed below:
  • Experience troubleshooting software issues.
  • Knowledge of DISA STIGS and how to implement.
  • CompTIA Security+ certification (must show proof of cert prior to interview).
  • Excellent written and verbal communication skills.
  • US Citizenship is required due to US government contract requirement.
  • Active SECRET clearance with the ability to obtain TS/SSBI.

PREFERRED QUALIFICATIONS:
Candidates with experience or knowledge in these desired skills will be given preferential consideration:
  • Application installation/configuration/administration experience on Windows-based systems required, experience with large-scale/complex app configuration.
  • Strong foundation and understanding of AWS native services required, experience with AWS GovCloud.
  • Active/Interim TS/SSBI clearance.

COMPENSATION & BENEFITS:
The compensation range is based on industry compensation data and/or position budget and reflects our commitment to transparency and fairness:
  • The annual base compensation range is $115,000 to $150,000, commensurate with education, certifications, clearance, and experience.
  • Other compensation may include discretionary bonuses, referral rewards, and spot awards.
  • Full-time benefits include comprehensive health insurance (medical, dental, vision), Health Reimbursement Account (HRA), paid time off, paid holidays, life insurance with accidental death and dismemberment, short-term disability insurance, long-term disability insurance, 401(k) with matching,

This position is contingent upon customer approval.
Eligible for our External Referral Program.
All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, marital status, pregnancy, childbirth or related medical conditions, age, military status, disability, ethnic or national origin, or other legally protected status.
For a listing of all DESI open positions, please visit the "Careers" section of our website at https://www.ilikedesi.com/careers