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Chemical Engineering Bioprocess Jobs (NOW HIRING)

Bioprocess Applications Engineer 3

Bedford, MA ยท On-site

$84K - $127K/yr

Your Role: We're seeking a Bioprocess Applications Engineer 3 to join the Single Use and Integrated ... D. in an Engineering field (e.g., Chemical Engineering, Mechanical Engineering, Biochemical ...

JOB SUMMARY The Bioprocess Specialist is a senior individual contributor providing advanced ... Bachelor's degree in Chemical Engineering, Biochemical Engineering, Biotechnology, Biochemistry ...

JOB SUMMARY The Bioprocess Specialist is a senior individual contributor providing advanced ... Bachelor's degree in Chemical Engineering, Biochemical Engineering, Biotechnology, Biochemistry ...

JOB SUMMARY The Bioprocess Specialist is a senior individual contributor providing advanced ... Bachelor's degree in Chemical Engineering, Biochemical Engineering, Biotechnology, Biochemistry ...

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Chemical Engineering Bioprocess information

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$40K

$87.5K

$140K

How much do chemical engineering bioprocess jobs pay per year?

As of Aug 10, 2026, the average yearly pay for chemical engineering bioprocess in the United States is $87,487.00, according to ZipRecruiter salary data. Most workers in this role earn between $67,500.00 and $106,500.00 per year, depending on experience, location, and employer.

What is the difference between Chemical Engineering Bioprocess vs Chemical Engineering Process Engineer?

AspectChemical Engineering BioprocessChemical Engineering Process Engineer
CredentialsBachelor's or Master's in Chemical Engineering, Bioprocessing certificationsBachelor's or Master's in Chemical Engineering, Process certifications
Work EnvironmentBiotech, pharmaceutical, and food industries; lab and production settingsPetrochemical, chemical manufacturing; plant and industrial facilities
Industry UsageBiotech firms, pharmaceutical companies, food processingChemical plants, refineries, manufacturing industries

While both roles require a background in chemical engineering, Chemical Engineering Bioprocess focuses on biotechnological applications like pharmaceuticals and food products, often involving biological systems. Chemical Engineering Process Engineers work in traditional chemical manufacturing, emphasizing chemical reactions and process optimization. The roles differ mainly in industry focus and specific technical expertise, but share foundational chemical engineering principles.

What is a chemical engineering bioprocess?

A Chemical Engineering Bioprocess involves using chemical engineering principles to design, optimize, and scale up processes that use biological organisms or systems to produce products such as biofuels, pharmaceuticals, and food ingredients. Bioprocess engineers work with cells, enzymes, or microorganisms in controlled environments, focusing on fermentation, purification, and downstream processing. Their work bridges the gap between laboratory research and large-scale manufacturing, ensuring efficient, safe, and cost-effective production.

What are the key skills and qualifications needed to thrive as a chemical engineering bioprocess professional, and why are they important?

To thrive as a Chemical Engineering Bioprocess professional, you need a solid background in chemical engineering principles, bioprocess design, and process optimization, usually supported by a degree in chemical or biochemical engineering. Familiarity with bioreactors, process simulation software, and quality control systems, as well as certifications like Six Sigma, are often important. Strong problem-solving abilities, teamwork, and effective communication skills help professionals excel in cross-functional teams and complex project environments. These skills ensure efficient, safe, and innovative development of bioprocesses critical to industries such as pharmaceuticals, food, and biotechnology.

What are common challenges faced by chemical engineering bioprocess professionals when scaling up laboratory processes to industrial production?

One of the main challenges Chemical Engineering Bioprocess professionals encounter is translating small-scale laboratory results into efficient, cost-effective industrial processes. Factors like maintaining product yield, ensuring sterility, and managing variations in raw material quality become more complex at scale. Additionally, troubleshooting issues such as equipment fouling or unexpected microbial behavior requires collaboration with cross-functional teams, including quality assurance and maintenance. Addressing these challenges is crucial for delivering consistent, high-quality products in large quantities.
More about Chemical Engineering Bioprocess jobs
What job categories do people searching Chemical Engineering Bioprocess jobs look for? The top searched job categories for Chemical Engineering Bioprocess jobs are:
Infographic showing various Chemical Engineering Bioprocess job openings in the United States as of August 2026, with employment types broken down into 91% Full Time, 4% Part Time, 4% Contract, and 1% Nights. Highlights an 86% Physical, 5% Hybrid, and 9% Remote job distribution, with an average salary of $87,487 per year, or $42.1 per hour.

Senior Downstream Bioprocess Engineer

Johns Hopkins Applied Physics Lab

Laurel, MD โ€ข On-site

$105 - $290/hr

Other

Medical, Dental, Vision, Life, Retirement, PTO

Posted 4 days ago


Job description

Description

Do you enjoy developing downstream purification processes for microbial production of small molecules and metabolites?


Do you want to apply your expertise in downstream bioprocess engineering to pressing national security challenges?


Do you enjoy working as part of an interdisciplinary team of scientists to solve complex biotechnology challenges?


If so, weโ€™re looking for someone like you to join our team in the Biological Sciences Group, here at the Johns Hopkins University Applied Physics Lab.


We are seeking a downstream bioprocess engineer to help us develop scalable purification processes for microbial biomanufacturing. You'll join an interdisciplinary team of microbiologists, metabolic engineers, and chemists working together to develop innovative biotechnology solutions for national security. As the team's downstream processing expert, you'll work closely with colleagues across multiple disciplines to recover, purify, and characterize microbially produced small molecules and metabolites.


As part of the Biological Sciences Group, in the Research Exploratory Development Department, you will be at the forefront of APL's mission to provide impactful contributions to critical challenges. You will contribute to building outstanding expertise in molecular biology, in the pursuit of challenges in national security.


As a Senior Downstream Bioprocess Engineer you willโ€ฆ

  • Develop and optimize downstream processes for recovery and purification of microbially produced small molecules and metabolites.

  • Design and execute experiments to improve process performance and characterize biomanufacturing products using analytical chemistry techniques.

  • Collaborate with interdisciplinary teams of scientists and engineers to develop innovative biotechnology solutions for national security applications.

  • Lead technical efforts on internally and externally funded research projects, including project planning, execution, and communication of results.

  • Contribute to the growth of our research portfolio by developing new technical concepts, writing proposals, and building relationships with sponsors and collaborators.


Qualifications
You meet our minimum qualifications for the job if youโ€ฆ

  • Have a PhD in Chemical Engineering, Biological Engineering, Biochemistry, Chemistry, or a related field

  • 1+ year of postdoctoral research experience.

  • Have experience developing downstream processing methods for microbial production of small molecules or metabolites.

  • Have experience developing and applying analytical chemistry methods, including HPLC, LC/MS, GC/MS, or related techniques.

  • Have experience designing, executing, and troubleshooting laboratory experiments for purification, characterization, and process optimization.

  • Have strong written and verbal communication skills, demonstrated through publications, presentations, or related experience.

  • Are able to obtain an Interim Secret level security clearance by your start date and can ultimately obtain a TS/SCI level clearance. If selected, you will be subject to a government security clearance investigation and must meet the requirements for access to classified information. Eligibility requirements include U.S. citizenship.


Youโ€™ll go above and beyond our minimum requirements if youโ€ฆ

  • Have experience engineering microbial metabolic pathways or microbial strain development.

  • Have experience with yeast or non-model microorganisms.

  • Have experience scaling microbial bioprocesses from bench to pilot scale.

  • Have experience with molecular biology techniques used to support bioprocess development

  • Have experience leading multidisciplinary research projects or developing research proposals.


About Us
Why Work at APL?

The Johns Hopkins University Applied Physics Laboratory (APL) brings world-class expertise to our nationโ€™s most critical defense, security, space and science challenges. While we are dedicated to solving complex challenges and pioneering new technologies, what makes us truly outstanding is our culture. We offer a vibrant, welcoming atmosphere where you can bring your authentic self to work, continue to grow, and build strong connections with inspiring teammates.


At APL, we celebrate our differences of perspectives and encourage creativity and bold, new ideas. Our employees enjoy generous benefits, including a robust education assistance program, unparalleled retirement contributions, and a healthy work/life balance. APLโ€™s campus is located in the Baltimore-Washington metro area. Learn more about our career opportunities at https://www.jhuapl.edu/careers.


All qualified applicants will receive consideration for employment without regard to race, creed, color, religion, sex, gender identity or expression, sexual orientation, national origin, age, physical or mental disability, genetic information, veteran status, occupation, marital or familial status, political opinion, personal appearance, or any other characteristic protected by applicable law. APL is committed to providing reasonable accommodation to individuals of all abilities, including those with disabilities. If you require a reasonable accommodation to participate in any part of the hiring process, please contact Accessibility@jhuapl.edu.


The referenced pay range is based on JHU APLโ€™s good faith belief at the time of posting. Actual compensation may vary based on factors such as geographic location, work experience, market conditions, education/training and skill level with consideration for internal parity. For salaried employees scheduled to work less than 40 hours per week, annual salary will be prorated based on the number of hours worked. APL may offer bonuses or other forms of compensation per internal policy and/or contractual designation. Additional compensation may be provided in the form of a sign-on bonus, relocation benefits, locality allowance or discretionary payments for exceptional performance. APL provides eligible staff with a comprehensive benefits package including retirement plans, paid time off, medical, dental, vision, life insurance, short-term disability, long-term disability, flexible spending accounts, education assistance, and training and development. Applications are accepted on a rolling basis.


Minimum Rate

$105,000 Annually


Maximum Rate

$290,000 Annually

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