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Bioinformatics Software Engineer Jobs in Massachusetts

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA · On-site

$170K - $190K/yr

Bioinformatics Scientist (Mid/Senior) Compensation: $170,000 - $190,000 Location: South San ... Is curious about the intersection of biology, algorithms, and software engineering. * Gets excited ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA · On-site

$170K - $190K/yr

Bioinformatics Scientist (Mid/Senior) Compensation: $170,000 - $190,000 Location: South San ... Is curious about the intersection of biology, algorithms, and software engineering. Gets excited ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA · On-site

$170K - $190K/yr

Bioinformatics Scientist (Mid/Senior) Compensation: $170,000 - $190,000 Location: South San ... Is curious about the intersection of biology, algorithms, and software engineering. * Gets excited ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA

$170K - $190K/yr

Bioinformatics Scientist (Mid/Senior) Compensation: $170,000 - $190,000 Location: South San ... Is curious about the intersection of biology, algorithms, and software engineering. * Gets excited ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA · On-site

$170K - $190K/yr

Bioinformatics Scientist (Mid/Senior) Compensation: $170,000 - $190,000 Location: South San ... Is curious about the intersection of biology, algorithms, and software engineering. Gets excited ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA

$170K - $190K/yr

Bioinformatics Scientist (Mid/Senior) Compensation: $170,000 - $190,000 Location: South San ... Is curious about the intersection of biology, algorithms, and software engineering. * Gets excited ...

SecureBio, LLC

Software Engineer

Cambridge, MA · On-site

$165 - $195/hr

Prior experience with biology or bioinformatics is not required. Responsibilities * Pipeline ... Strong software engineering fundamentals: reliable, maintainable code and sound software design * A ...

Massgeneralbrigham

Bioinformatician 1

Boston, MA · Hybrid

$75K - $109K/yr

... programming languages, and computational sciences. - Demonstrated ability working with open-source bioinformatics software. - Possess strong analytical skills, including critical thinking, data ...

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Showing results 21-40

All JobsBioinformatics Software Engineer JobsBioinformatics Software Engineer Jobs in Massachusetts

Bioinformatics Software Engineer information

See Massachusetts salary details

$47K

$143.1K

$260.5K

How much do bioinformatics software engineer jobs pay per year?

As of Aug 20, 2026, the average yearly pay for bioinformatics software engineer in Massachusetts is $143,126.00, according to ZipRecruiter salary data. Most workers in this role earn between $104,800.00 and $171,500.00 per year, depending on experience, location, and employer.

What is a bioinformatics software engineer?

A Bioinformatics Software Engineer develops and maintains software tools, algorithms, and databases for analyzing biological data, such as genomic sequences and protein structures. They work at the intersection of computer science and biology, using programming languages like Python, Java, or R to process and interpret large-scale biological datasets. Their role is crucial in fields like genomics, drug discovery, and personalized medicine, where computational solutions help researchers derive meaningful insights from complex biological information.

What are the typical daily responsibilities of a bioinformatics software engineer?

As a Bioinformatics Software Engineer, your day-to-day responsibilities typically include designing, developing, and maintaining software tools or pipelines for analyzing biological data such as DNA, RNA, or protein sequences. You may collaborate closely with researchers and scientists to understand biological problems and translate them into computational solutions, reviewing and optimizing code for efficiency and scalability. Troubleshooting data processing issues, integrating new algorithms, and contributing to documentation are also common tasks. Additionally, you might participate in cross-functional meetings and keep up with emerging technologies and trends in the field.

What are the key skills and qualifications needed to thrive in the bioinformatics software engineer position, and why are they important?

To thrive as a Bioinformatics Software Engineer, you need a strong background in software development (especially with Python, R, or C++), algorithm design, and biological data analysis, usually supported by a degree in bioinformatics, computer science, or a related field. Familiarity with bioinformatics tools, databases (like NCBI or Ensembl), version control systems (such as Git), and experience with cloud computing or high-performance computing environments is highly valued. Strong problem-solving skills, attention to detail, and the ability to collaborate effectively with biologists and data scientists set candidates apart. These competencies are crucial for efficiently developing reliable software solutions that support complex biological research and data-driven discoveries.

What are the most commonly searched types of Bioinformatics Software Engineer jobs in Massachusetts?

The most popular types of Bioinformatics Software Engineer jobs in Massachusetts are:

What are popular job titles related to Bioinformatics Software Engineer jobs in Massachusetts?

For Bioinformatics Software Engineer jobs in Massachusetts, the most frequently searched job titles are:

What job categories do people searching Bioinformatics Software Engineer jobs in Massachusetts look for?

The top searched job categories for Bioinformatics Software Engineer jobs in Massachusetts are:

What cities in Massachusetts are hiring for Bioinformatics Software Engineer jobs?

Cities in Massachusetts with the most Bioinformatics Software Engineer job openings:

What are popular job titles related to Bioinformatics Software Engineer jobs in MA?

For Bioinformatics Software Engineer jobs in MA, the most frequently searched job titles are:

Bioinformatics Software Engineer jobs near you
Infographic showing various Bioinformatics Software Engineer job openings in Massachusetts as of August 2026, with employment types broken down into 80% Full Time, and 20% Contract. Highlights an 100% In-person job distribution, with an average salary of $143,126 per year, or $68.8 per hour.

Bioinformatics Scientist

Vivo HealthStaff

Boston, MA • On-site

$170K - $190K/yr

Full-time

Re-posted 10 days ago

Job description

Bioinformatics Scientist (Mid/Senior)
Compensation: $170,000 - $190,000
Location: South San Francisco, CA
Job Type: Full-time (Hybrid)
Equity: Highly Competitive Equity
About Our Client
TechStaffers has partnered with one of our clients & they are on a mission to accelerate new cures and promote a healthier planet by unlocking a new level of productivity for scientists. Their sequencing services are used daily by thousands of innovators, including Nobel laureates, Fortune 100 pharma, and over 70,000 scientists. They began by revolutionizing plasmid sequencing, making it exponentially cheaper and faster. Now, they are expanding that same disruptive model across all of genomics, including a new RNA-seq service, to provide scientists everywhere with faster and more affordable access to data. Every team member plays a crucial role in driving the future of biotech research, building the world's most efficient sequencing engine that operates overnight and scales globally.
Position Overview
We are seeking a highly motivated mid- to senior-level Bioinformatics Scientist to work on the bioinformatics engine that powers this impact. This role is heavily bioinformatics-focused, emphasizing deep domain expertise and the building of scalable products over general software platform skills. You will wear many hats, leading projects from concept through production while maintaining strong ownership of your work.
Key Responsibilities
  • Build blazing-fast, production-grade bioinformatics workflows that process thousands of samples per day.
  • Develop novel algorithms that turn raw sequencing data into fast, intuitive, and accurate insights.
  • Hunt down bugs and tame the chaos of real-world sequencing data, including biological artifacts and platform quirks.
  • Translate bioinformatics outputs into a dynamic scientific UX that feels magical to researchers.
  • Stay on top of cutting-edge tools and find creative ways to integrate them into real-world pipelines.
  • Mentor teammates and grow your own skills in a fast-moving, collaborative environment.

Qualifications & Requirements
  • Education: PhD in Bioinformatics, Computer Science, Statistics, Biology, Biochemistry, Physics, or a closely related field.
  • Experience: 3+ years of experience developing production bioinformatics pipelines.
  • Industry Background: Minimum of 2 years of industry experience; candidates whose only experience is in academia will not be considered
  • Domain Expertise: Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics.
  • Technical Tools: Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.
  • Sequencing Data: Hands-on work with Illumina or Oxford Nanopore sequencing platforms.
  • Product Impact: Proven experience building scalable bioinformatics products and clear evidence of delivering impactful, independent projects.
  • Bonus: Contribution of a novel bioinformatics tool or algorithm is highly regarded as a signal of a top-tier candidate.

Ideal Candidate Profile
  • Thrives with high agency and high ownership, leading projects from idea to production.
  • Exhibits strong leadership qualities, initiative, and a clear motivation to advance their career.
  • Is curious about the intersection of biology, algorithms, and software engineering.
  • Gets excited knowing their work directly accelerates the next generation of medicines and biotechnology.
  • Values clear communication and loves helping others level up.
  • Is energized by a tight-knit, fast-paced team environment.

Visa Requirements
  • Visa sponsorship is generally not available.
  • Able to accommodate TN or H-1B1
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About Vivo HealthStaff

Sourced by ZipRecruiter

Vivo HealthStaff provides permanent recruitment services for both clinical and administrative positions in the healthcare sector. Over the past 2 years, our clients have seen a 98% retention rate with Vivo HealthStaff placements.

Industry

Health care and social assistance

Company size

11 - 50 Employees

Headquarters location

Dublin, CA, US

Year founded

2016

Social media

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