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Bioinformatics Software Developer Jobs (NOW HIRING)

Sr HPC Engineer

Houston, TX · On-site

$96K - $132K/yr

MS with extensive industry experience may be considered. • 8+ years' experience in bioinformatics software engineering, computational genomics, or related field. • 4+ years' experience leading or ...

E-logic is hiring a Bioinformatics Scientist / Analyst to deliver specialized domain expertise in ... You will collaborate directly with software engineers to refine analytical algorithms, build ...

Sc. plus a minimum of 3 years' experience in Bioinformatics, Computer Science, Programming, Software Development, or related field Previous experience with NGS data and associated bioinformatics ...

They are seeking a Bioinformatics Engineer to join their team supporting major pharmaceutical ... software engineers to integrate pipelines into broader analytical ecosystems • Stay current with ...

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How much do bioinformatics software developer jobs pay per hour?

As of Jul 14, 2026, the average hourly pay for bioinformatics software developer in the United States is $42.79, according to ZipRecruiter salary data. Most workers in this role earn between $42.55 and $43.03 per hour, depending on experience, location, and employer.

What does a bioinformatics software developer do?

A bioinformatics software developer designs and implements software tools to analyze biological data, such as genetic sequences and molecular structures. They often use programming languages like Python or R, work with large datasets, and collaborate with scientists to create algorithms that support research and diagnostics.

What are some common challenges faced by Bioinformatics Software Developers in their daily work?

Bioinformatics Software Developers often work with large and complex biological datasets, which can present challenges in terms of data integration, processing efficiency, and scalability. Keeping up with rapidly evolving research methodologies and integrating new scientific findings into software solutions can also be demanding. Developers must collaborate closely with biologists, researchers, and other IT professionals to ensure that the tools they build meet scientific needs and are user-friendly. Strong problem-solving skills and adaptability help in overcoming technical and domain-specific obstacles, making this a dynamic and intellectually rewarding career choice.

What is a Bioinformatics Software Developer job?

A Bioinformatics Software Developer designs, implements, and optimizes software tools for analyzing biological data, such as genomic sequences or protein structures. They combine expertise in computer science, bioinformatics, and data science to develop algorithms, databases, and pipelines that support research and clinical applications. These developers often work with researchers to streamline data processing, improve efficiency, and enable new discoveries in the life sciences. Strong programming skills in languages like Python, Java, or R, along with knowledge of bioinformatics frameworks, are essential for this role.

What engineer makes $500,000 a year?

Highly experienced software engineers, especially those in specialized fields like machine learning, AI, or working at top tech companies, can earn $500,000 or more annually. These roles often require advanced skills, certifications, and a strong track record of innovation or leadership in the industry.

What is the salary of bioinformatic software developer?

The salary of a bioinformatics software developer typically ranges from $70,000 to $120,000 annually, depending on experience, education, location, and industry. Professionals with advanced skills in programming, data analysis, and familiarity with tools like Python, R, and Linux tend to earn higher salaries.

Is AI going to replace bioinformatics?

Bioinformatics software developers use AI and machine learning tools to analyze biological data, but AI is designed to augment rather than replace human expertise in interpreting complex biological information. AI can automate routine tasks and improve data analysis efficiency, but human oversight remains essential for developing algorithms, validating results, and making critical decisions in bioinformatics research.

What are the key skills and qualifications needed to thrive in the Bioinformatics Software Developer position, and why are they important?

To thrive as a Bioinformatics Software Developer, you need strong programming skills (especially in Python, R, or Java), a solid foundation in computational biology, and typically a degree in computer science, bioinformatics, or a related field. Familiarity with bioinformatics tools (such as BLAST, Bioconductor, or Galaxy), experience with version control systems like Git, and understanding databases and cloud platforms are commonly required. Collaboration, problem-solving abilities, and strong communication skills help facilitate effective teamwork across interdisciplinary scientific teams. These competencies are vital for developing robust software solutions that address complex biological data challenges encountered in research and healthcare settings.

More about Bioinformatics Software Developer jobs
What cities are hiring for Bioinformatics Software Developer jobs? Cities with the most Bioinformatics Software Developer job openings:
What states have the most Bioinformatics Software Developer jobs? States with the most job openings for Bioinformatics Software Developer jobs include:
Infographic showing various Bioinformatics Software Developer job openings in the United States as of July 2026, with employment types broken down into 85% Full Time, 11% Part Time, 1% Temporary, 1% Contract, and 2% Nights. Highlights an 82% Physical, 2% Hybrid, and 16% Remote job distribution, with an average salary of $89,000 per year, or $42.8 per hour.
Staff Scientist, Bioinformatics

Staff Scientist, Bioinformatics

Thermo Fisher Scientific

Pleasanton, CA

$129K - $175K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 26 days ago


Thermo Fisher Scientific rating

7.7

Company rating: 7.7 out of 10

Based on 411 frontline employees who took The Breakroom Quiz

193rd of 527 rated manufacturers


Job description

Work Schedule

Standard (Mon-Fri)

Environmental Conditions

Office

Job Description

As part of the Thermo Fisher Scientific team, you’ll discover meaningful work that makes a positive impact on a global scale. Join our colleagues in bringing our Mission to life every single day to enable our customers to make the world healthier, cleaner and safer. We provide our global teams with the resources needed to achieve individual career goals while helping to take science a step beyond by developing solutions for some of the world’s toughest challenges, like protecting the environment, making sure our food is safe, or helping find cures for cancer.

Discover Impactful Work:

Join our innovative Next-Generation Sequencing (NGS) R&D Bioinformatics team, where you'll contribute to developing fully automated, sample-to-report NGS workflows for both clinical and research applications, with a focus on oncology. Working with cross-functional teams of algorithm developers, software engineers, molecular biologists, and product managers, you will help advance genomic analysis and precision medicine.  This role provides opportunities to advance genomic research while contributing to solutions that improve patient outcomes worldwide.

Location

This is a fully onsite role based in Pleasanton, CA.  Relocation assistance is not provided for this position.

A Day in the Life:

  • Drive development and release of bioinformatics software and assays for oncology diagnostics
  • Ensure high-quality bioinformatics operations, including design and implantation of bioinformatic pipelines
  • Develop and implement automation tools, validate algorithms, and ensure compliance with applicable regulatory standards and quality requirements.
  • Lead projects from initiation through successful completion.
  • Collaborate with cross-functional teams to translate customer requirements into software requirements
  • Contribute to continuous improvement of workflows, tools, and processes
  • Maintain accurate, complete, and high-quality documentation in accordance with company procedures and regulatory requirements.

Keys to Success:

Education

  • Bachelor’s degree in Bioinformatics, Computational Biology, Mathematics, Computer Science, Electrical Engineering, or related discipline with 8+ years of relevant experience or Master’s with 6+ years or PhD with 4+ years experience

Experience

  • Proficiency in high-level programming languages such as C++, Python, or Java
  • Expertise in Linux/Unix environments and relational databases
  • Experience with testing and documentation in regulated environments
  • Demonstrated project coordination and cross-functional team collaboration
  • Experience with variant calling, sequence alignment, and functional annotation
  • Familiarity with machine learning techniques and statistical modeling is preferred

Knowledge, Skills, Abilities

  • Knowledge of software development best practices and version control systems
  • Understanding of clinical and regulatory requirements for diagnostic applications
  • Detail-oriented with ability to adapt to team standards
  • Strong analytical and problem-solving abilities
  • Excellent communication skills

Other

  • Must be legally authorized to work in the United States without sponsorship now or in the future
  • Must be able to pass a comprehensive background check and drug screen

Compensation and Benefits

The salary range estimated for this position based in California is $129,400.00–$175,000.00.

This position may also be eligible to receive a variable annual bonus based on company, team, and/or individual performance results in accordance with company policy. We offer a comprehensive Total Rewards package that our U.S. colleagues and their families can count on, which includes:

  • A choice of national medical and dental plans, and a national vision plan, including health incentive programs

  • Employee assistance and family support programs, including commuter benefits and tuition reimbursement

  • At least 120 hours paid time off (PTO), 10 paid holidays annually, paid parental leave (3 weeks for bonding and 8 weeks for caregiver leave), accident and life insurance, and short- and long-term disability in accordance with company policy

  • Retirement and savings programs, such as our competitive 401(k) U.S. retirement savings plan

  • Employees’ Stock Purchase Plan (ESPP) offers eligible colleagues the opportunity to purchase company stock at a discount

For more information on our benefits, please visit: https://jobs.thermofisher.com/global/en/total-rewards


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