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Systems Engineer Secret Clearance Jobs in Raleigh, NC

Senior Systems Engineer

Raleigh, NC · On-site

$92K - $126K/yr

We are seeking an experienced Systems Engineer to join our team and play a crucial role in ... Existing DoD security clearance Who is ARA? Do you want to work for a purpose? Applied Research ...

Senior Systems Engineer

Raleigh, NC · On-site

$101K - $139K/yr

We are seeking an experienced Systems Engineer to join our team and play a crucial role in ... Existing DoD security clearance Who is ARA? Do you want to work for a purpose? Applied Research ...

Senior Systems Engineer

Raleigh, NC · On-site

$92K - $126K/yr

We are seeking an experienced Systems Engineer to join our team and play a crucial role in ... Existing DoD security clearance Who is ARA? Do you want to work for a purpose? Applied Research ...

Senior AI Systems Engineer

Raleigh, NC · On-site +1

$92K - $126K/yr

Experience with simulations for scientific or engineering projects, particularly physical systems ... Secret Security Clearance - Active or Inactive Education: * Bachelor's degree in CS, Software ...

Senior AI Systems Engineer

Raleigh, NC · On-site

$92K - $126K/yr

Experience with simulations for scientific or engineering projects, particularly physical systems ... Secret Security Clearance - Active or Inactive Education: * Bachelor's degree in CS, Software ...

Systems Engineer Senior I

Wake Forest, NC

$89K - $122K/yr

S. nationality requirements and be eligible to obtain a security clearance. Position Summary Ultra Maritime is searching for a highly motivated and detail-oriented Systems Engineer to support the ...

Systems Engineer Senior I

Wake Forest, NC · On-site

$89K - $122K/yr

S. nationality requirements and be eligible to obtain a security clearance. Position Summary Supports the timely delivery of systems Engineering work packages within cost and quality requirements for ...

PlanIT Group is seeking a Systems Engineer III for our Federal customer in the Raleigh, NC area ... Trust Clearance. • Pass both a client mandated clearance process to include drug screening ...

Showing results 21-40

Systems Engineer Secret Clearance information

See Raleigh, NC salary details

$52K

$123.7K

$162.3K

How much do systems engineer secret clearance jobs pay per year?

As of Sep 3, 2026, the average yearly pay for systems engineer secret clearance in Raleigh, NC is $123,663.00, according to ZipRecruiter salary data. Most workers in this role earn between $95,300.00 and $152,600.00 per year, depending on experience, location, and employer.

What is a systems engineer secret clearance?

A Systems Engineer with a Secret Clearance is responsible for designing, developing, and maintaining complex systems while handling sensitive or classified information. They ensure system functionality, security, and compliance with government regulations. This role often involves working on defense, aerospace, or intelligence projects that require access to classified data. The Secret Clearance ensures that the engineer has undergone a background check and meets the security requirements set by the government.

What are the key skills and qualifications needed to thrive as a systems engineer secret clearance?

To thrive as a Systems Engineer with Secret Clearance, you need a strong background in systems architecture, integration, troubleshooting, and typically a bachelor's degree in engineering or a related field. Familiarity with defense-related platforms, operating systems (such as Linux and Windows), network administration tools, and relevant certifications like CompTIA Security+ or CISSP are often required. Excellent problem-solving, communication, and teamwork skills help you excel when interfacing with multidisciplinary teams and stakeholders. These qualities are critical for ensuring mission success, security compliance, and seamless system operations in sensitive environments.

What are some common challenges faced by systems engineers with secret clearance?

Systems Engineers with Secret Clearance often work on highly complex and secure projects that can involve troubleshooting mission-critical systems under tight deadlines. Managing and integrating systems that must comply with strict security protocols can be challenging, especially when coordinating with multiple teams or accommodating evolving project requirements. Additionally, engineers must frequently stay up-to-date with the latest technology and regulations in order to mitigate risks and maintain compliance. However, these challenges offer excellent opportunities for professional growth, technical development, and collaboration with dedicated experts in the field.

What are popular job titles related to Systems Engineer Secret Clearance jobs in Raleigh, NC?

For Systems Engineer Secret Clearance jobs in Raleigh, NC, the most frequently searched job titles are:

What job categories do people searching Systems Engineer Secret Clearance jobs in Raleigh, NC look for?

The top searched job categories for Systems Engineer Secret Clearance jobs in Raleigh, NC are:

Infographic showing various Systems Engineer Secret Clearance job openings in Raleigh, NC as of August 2026, with employment types broken down into 1% As Needed, 84% Full Time, 10% Part Time, 4% Contract, and 1% Nights. Highlights an 91% Physical, 2% Hybrid, and 7% Remote job distribution, with an average salary of $123,663 per year, or $59.5 per hour.

Senior Systems Engineer

Berriehill Research

Raleigh, NC • On-site

$92K - $126K/yr

Full-time

Re-posted 16 days ago


Job description

If you are passionate about applying your expertise to solve challenging problems of national importance and want to accelerate your career growth, then we have the job for you! You will be able to achieve your personal and professional goals in a stable environment that emphasizes and rewards the entrepreneurial spirit. We are seeking a highly skilled Systems Engineer to join our team. The ideal candidate will play a crucial role in growing and managing a team developing digital engineering and mission analysis capabilities for the Department of Defense.

We are seeking an experienced Systems Engineer to join our team and play a crucial role in developing software to connect physics-based Modeling and Simulation (M&S) tools in a Digital Engineering Environment. Candidates should understand the benefits of a Digital Thread, be conversant on the strengths and weaknesses of existing MBSE tools, and be passionate about improving systems engineering process to solve real warfighter problems. Responsibilities include developing Model-Based Systems Engineering (MBSE) products for DoD Systems, marketing new ideas and presenting to potential customers, managing projects through technical leadership, and influencing the development of software to connect engagement, mission, and campaign analysis tools for the DoD.

Systems engineers who are passionate about applying their expertise to solve problems of national importance, have a strong entrepreneurial spirit, and are seeking opportunities for personal and professional growth in a stable environment are strongly encouraged to apply.

Senior Systems Engineer Position Requirements: 

  • U.S. Citizenship
  • The nature of work (i.e. interactions with the intelligence community and DoD programs) requires eligibility to apply for and hold a US security clearance; selected applicants will undergo a security investigation and must meet eligibility requirements at the time of employment
  • BS, MS, or PhD in engineering, computer science, physics, operations research, applied mathematics, or a closely related field 
  • 10+ years relevant work experience with BS
  • 8+ years relevant work experience with MS
  • Experience going from problem statement to prototype to production-ready products
  • Experience with Digital Transformation strategies, setting up ecosystems and environments, and providing Model-Based Systems Engineering (MBSE) architectures
  • Strong communication and collaboration skills, capable of working effectively in a dynamic, team-oriented environment

Senior Systems Engineer Preferences: 

Above all, we value passion, a continuous desire to learn, and teamwork. We are confident that if you possess the right attitude, work ethic, and skill set, you will succeed in the role. In addition to the experience and skills above, if you have any of the following, you will be able to accelerate your effectiveness and impact. 

  • Familiarity with Systems Modeling Language (SysML) v2
  • Broad understanding of warfare models (engagement, mission analysis, and campaign analysis software) or specific domain expertise (e.g., lethality, guidance, propulsion, EW, etc.)
  • Experience marketing and writing proposals
  • DoD cybersecurity and cyber risk assessment experience
  • Existing DoD security clearance

Who is ARA?   

Do you want to work for a purpose? Applied Research Associates, Inc. (aka ARA) is an employee-owned international research and engineering company. We have been providing technically superior solutions to complex and challenging problems in the physical sciences since 1979. ARA has over 2,200 employee-owners and continues to grow rapidly. Together, our offices throughout the U.S. and Canada provide a broad range of technical expertise in defense, civil, and health technologies, computer software and simulation, systems analysis, environmental technologies, and testing and measurement.   

ARA also prides itself, on having a challenging culture where innovation & experimentation are the norm. The motto, “Engineering and Science for Fun and Profit” sums up the ARA experience. Employee ownership ensures you have a voice in what happens in the company. We are also very proud of our Women’s Initiative Network (WIN), whose purpose is to motivate, support, and encourage professional career development for women to maximize career and professional accomplishments.  

To find out more about what the Software Enterprise Division has to offer, visit our website at: https://www.ara.com/benefits/