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Senior Molecular Modeling Jobs (NOW HIRING)

NVIDIA Corporation

Senior Architect

California, MO · On-site

$224 - $356.50/hr

Senior Architect page is loaded## Senior Architectlocations: US, CA, Remote: US, MA, Remotetime ... High-impact publications in AI for chemistry, molecular modeling, or materials discovery.

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Iambic Therapeutics, Inc

$124K - $172K/yr

Experience with molecular modeling platforms such as MOE, Schrödinger, OpenEye, or equivalent tools * Familiarity with MD simulation, molecular docking and advanced binding affinity prediction ...

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Senior Molecular Modeling information

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$25K

$80.3K

$163.5K

How much do senior molecular modeling jobs pay per year?

As of Aug 20, 2026, the average yearly pay for senior molecular modeling in the United States is $80,287.00, according to ZipRecruiter salary data. Most workers in this role earn between $41,500.00 and $103,000.00 per year, depending on experience, location, and employer.

What does a senior molecular modeler do?

A Senior Molecular Modeler is a specialist who uses computer simulations and theoretical chemistry techniques to study and predict the structure, properties, and behavior of molecules. They often work in pharmaceutical, biotechnology, or materials science settings, helping to design new drugs or materials by modeling interactions at the molecular level. Their responsibilities include running simulations, analyzing data, developing new modeling methods, and collaborating with experimental scientists to interpret results. Senior roles also typically involve project leadership and mentoring of junior colleagues.

What are the key skills and qualifications needed to thrive as a senior molecular modeler?

To thrive as a Senior Molecular Modeler, you need advanced knowledge in computational chemistry, molecular modeling, and structural biology, typically supported by a PhD in a related field. Proficiency with software tools like Schrödinger, MOE, AMBER, and programming languages such as Python or R is essential. Strong problem-solving, communication, and collaborative skills help you effectively interpret results and work within multidisciplinary teams. These skills and qualities are crucial for driving innovative drug discovery and accurately predicting molecular interactions.

What are some typical challenges faced by senior molecular modeling professionals in cross-functional research teams?

Senior Molecular Modeling professionals often work closely with medicinal chemists, biologists, and data scientists, which can present challenges in translating complex computational findings into actionable insights for diverse teams. Balancing multiple project priorities and adapting modeling techniques to evolving research goals are common hurdles. Strong communication skills and a collaborative mindset are essential to bridge gaps between computational and experimental perspectives, ensuring that modeling results effectively guide experimental design and decision-making.

What is the difference between Senior Molecular Modeling vs Molecular Dynamics Specialist?

AspectSenior Molecular ModelingMolecular Dynamics Specialist
Required CredentialsBachelor's/Master's in Chemistry, Biochemistry, or related fields; experience with modeling softwareBachelor's/Master's in Chemistry, Physics, or related fields; strong background in simulation techniques
Work EnvironmentResearch labs, pharmaceutical companies, biotech firmsResearch labs, pharmaceutical companies, biotech firms
Industry UsageDesigning molecular structures, drug discovery, material scienceRunning molecular dynamics simulations, analyzing simulation data
Common Search/ComparisonOften compared due to overlapping skills in modeling software and research goalsSpecializes in dynamic simulations, but overlaps with modeling tasks

While both roles involve computational chemistry and software tools, Senior Molecular Modeling focuses on creating and analyzing molecular structures, whereas Molecular Dynamics Specialists primarily run and interpret dynamic simulations to understand molecular behavior over time.

What cities are hiring for Senior Molecular Modeling jobs?

Cities with the most Senior Molecular Modeling job openings:

What are the most commonly searched types of Molecular Modeling jobs?

The most popular types of Molecular Modeling jobs are:

What states have the most Senior Molecular Modeling jobs?

States with the most job openings for Senior Molecular Modeling jobs include:

Senior Molecular Modeling jobs near you

Fullstack Software Engineer (Senior / Staff)

Genesis Molecular AI

San Mateo, CA • On-site

$139K - $183K/yr

Full-time

Medical, Dental, Vision, Retirement

Re-posted 15 days ago

Job description

Fullstack Software Engineer (Senior / Staff)
Genesis Molecular AI is building a world-class software team to solve problems in drug discovery through machine learning, biophysical simulation, and computational chemistry. We are looking for engineers excited to help develop new medicines and play a critical role in building out our software platform.
You will
  • Own and evolve the full-stack platform that computational chemists use daily, from data exploration and experiment management to real-time visualization, shipping AI-native workflows and modern interaction patterns that shorten the loop between hypothesis and insight
  • Build and expand tools for visualizing molecules and proteins, analyzing ML models, and managing complex chemical workflows
  • Partner with machine learning engineers and computational chemists to develop and productionize new computational methods for molecular property prediction
  • Scale our data infrastructure to handle billions of datapoints and thousands of parallel deep learning and molecular dynamics jobs

You are
  • A deep thinker who reasons from first principles, balances attention to detail with architectural thinking, and has an investigative curiosity to find the root cause of a problem
  • Comfortable owning problems across the entire stack - frontend interfaces, backend services, data pipelines, and infrastructure
  • Experienced shipping production code and driving projects end-to-end with minimal hand-holding
  • Excited to work at the intersection of software engineering, drug discovery, and machine learning

What we offer
  • The opportunity to work on high impact tools and products that are immediately deployed to accelerate the discovery of new medicines
  • Strong technical coworkers in AI, software, and chemistry, who all have a powerful mix of intellectual curiosity and humility. The team reads and discusses 1-2 machine learning or chemistry papers every week to stay on top of the field and inspire new ideas
  • Competitive salary and equity. Medical, dental, and vision insurance, and a 401(k) program

About Genesis Molecular AI
Genesis Molecular AI is pioneering foundation models for molecular AI to unlock a new era of drug design and development. Our generative and predictive AI platform, GEMS (Genesis Exploration of Molecular Space), integrates AI and physics into industry-leading models to generate and optimize drug molecules, including the breakthrough generative diffusion model Pearl for structure prediction. Genesis is backed by premier AI and life science investors, including a16z, NVIDIA, Rock Springs Capital, Menlo Ventures, T. Rowe Price, Fidelity, and Radical Ventures. Genesis has also signed category-leading AI-pharma deals, the most recent of which was a significant expansion with Incyte (see coverage in Forbes and GEN) with a total potential deal value of several billion dollars.
Genesis is headquartered in San Mateo, CA, with a fully integrated laboratory in San Diego. We are proud to be an inclusive workplace and an Equal Opportunity Employer.

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