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Senior Cheminformatics Jobs (NOW HIRING)

ROLE SUMMARY As a Senior Cheminformatics Data Scientist within the Computational Absorption, Distribution, Metabolism, and Excretion (cADME) group in Pfizer's Pharmacokinetics, Dynamics, and ...

Senior Computational Chemist

La Jolla, CA · On-site

$106K - $176K/yr

We are seeking a Senior Computational Chemist with a strong cheminformatics background and a proven track record of independent scientific delivery. The ideal candidate is expected to lead applied ...

Senior Computational Chemist

La Jolla, CA · On-site +1

$106K - $176K/yr

We are seeking a Senior Computational Chemist with a strong cheminformatics background and a proven track record of independent scientific delivery. The ideal candidate is expected to lead applied ...

Senior Software Engineer

San Diego, CA · On-site

$130K - $171K/yr

About the Role This is a senior, hands-on engineering role on the Development team. You'll be ... A cheminformatics or chemistry-domain engineering role. That work is owned elsewhere on the team ...

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Senior Cheminformatics information

See salary details

$25K

$80.3K

$163.5K

How much do senior cheminformatics jobs pay per year?

As of Jun 29, 2026, the average yearly pay for senior cheminformatics in the United States is $80,287.00, according to ZipRecruiter salary data. Most workers in this role earn between $41,500.00 and $103,000.00 per year, depending on experience, location, and employer.

What is the difference between Senior Cheminformatics vs Chemoinformatics Specialist?

AspectSenior CheminformaticsChemoinformatics Specialist
Required CredentialsBachelor's or Master's in Chemistry, Bioinformatics, or related field; experience in cheminformatics toolsSimilar credentials; often requires advanced knowledge of cheminformatics software and data analysis
Work EnvironmentPharmaceutical, biotech, or research labs; collaborative teamsResearch institutions, pharma companies; focus on data management and analysis
Employer & Industry UsageUsed in drug discovery, chemical data management, and R&DApplied in chemical data analysis, compound library management, and modeling

Both roles involve chemical data analysis and require similar educational backgrounds. The Senior Cheminformatics role typically involves more leadership responsibilities, while Chemoinformatics Specialists focus on data processing and software application. Both are vital in pharmaceutical and research industries, often overlapping in skills and tools used.

More about Senior Cheminformatics jobs
What cities are hiring for Senior Cheminformatics jobs? Cities with the most Senior Cheminformatics job openings:
What are the most commonly searched types of Cheminformatics jobs? The most popular types of Cheminformatics jobs are:
What states have the most Senior Cheminformatics jobs? States with the most job openings for Senior Cheminformatics jobs include:
Infographic showing various Senior Cheminformatics job openings in the United States as of June 2026, with employment types broken down into 89% Full Time, 8% Part Time, 1% Temporary, and 2% Contract. Highlights an 81% Physical, 3% Hybrid, and 16% Remote job distribution, with an average salary of $80,287 per year, or $38.6 per hour.
Senior ML/AI Cheminformatics Scientist

Senior ML/AI Cheminformatics Scientist

Pfizer, Inc.

Groton, CT • On-site

$93K - $156K/yr

Full-time

Medical, Dental, Vision, Retirement, PTO

Posted 19 days ago


Pfizer rating

8.3

Company rating: 8.3 out of 10

Based on 122 frontline employees who took The Breakroom Quiz

25th of 73 rated pharmaceutical


Job description

ROLE SUMMARY
As a Senior Cheminformatics Data Scientist within the Computational Absorption, Distribution, Metabolism, and Excretion (cADME) group in Pfizer's Pharmacokinetics, Dynamics, and Metabolism (PDM) organization, you will apply data-driven approaches to address critical challenges in small-molecule drug discovery.
In this role, you will develop, deploy, and continuously improve machine learning models for molecular property prediction and leverage Pfizer's proprietary chemical and biological datasets to inform decision-making across hit-to-lead and lead optimization stages. Your work will directly enable more efficient compound prioritization, improved prediction of ADME properties, and accelerated progression of discovery programs.
Success in this position will be defined by the delivery of robust, validated computational models and workflows that generate actionable insights and measurable impact on project outcomes. You will collaborate closely with cross-functional PDM partners and external collaborators to integrate AI-driven approaches into discovery workflows and maximize the value of Pfizer's industry-leading data assets.
KEY RESPONSIBILITIES
  • Develop and apply cheminformatics data-mining algorithms for the analysis of molecular modeling, virtual screening, and structure-activity relationship (SAR) analysis. Process and analyze chemical and biological datasets to evaluate properties such as drug-likeness, ADMET properties, dosing, etc.
  • Utilize molecular fingerprints, descriptors, and similarity metrics for compound clustering, classification, and regression.
  • Assist in development, maintenance, and monitoring of AI/ML models used for property prediction. Optimize data pipelines for processing and storing chemical structures using cheminformatics toolkits (e.g., RDKit, OpenEye,)
  • Collaborate with cross-functional teams to integrate computational approaches into curation and analysis workflows
  • Maintain best practices in data integrity, reproducibility, and documentation of QSAR AI/ML models

MINIMUM QUALIFICATIONS
  • PhD in a relevant field OR
  • Relevant Master's degree with 2+ years of experience in Cheminformatics, Computational Chemistry, Bioinformatics, Data Science, or a related field.
  • Proficiency in Python, with experience with cheminformatics libraries and topics (RDKit, OpenEye, DeepChem, InChI, SMILES/SMARTS).
  • Experience working in a structured collaborative data and software development environment (git).Experience using SAR model-building software such as SciKit-Learn, Torch, etc.
  • Strong understanding of basic statistical concepts and how to evaluate and track model performance.

PREFERRED QUALIFICATIONS
  • Experience using DAGs to define data pipelines, e.g., Luigi, Airflow, Dagster, Prefect, Kubeflow.)
  • Experience working with relational (SQL) and NoSQL databases for chemical data management.
  • Experience working with MLOps tools such as MLFlow, Neptune, or SageMaker.

PHYSICAL/MENTAL REQUIREMENTS
Ability to perform mathematical calculations and ability to perform complex data analysis
NON-STANDARD WORK SCHEDULE, TRAVEL OR ENVIRONMENT REQUIREMENTS
Some travel required
Relocation support available
WORK LOCATION ASSIGNMENT: This is a hybrid role requiring you to live within commuting distance and work on-site an average of 2.5 days per week.
The annual base salary for this position ranges from $93,600.00 to $156,000.00. In addition, this position is eligible for participation in Pfizer's Global Performance Plan with a bonus target of 12.5% of the base salary and eligibility to participate in our share based long term incentive program. We offer comprehensive and generous benefits and programs to help our colleagues lead healthy lives and to support each of life's moments. Benefits offered include a 401(k) plan with Pfizer Matching Contributions and an additional Pfizer Retirement Savings Contribution, paid vacation, holiday and personal days, paid caregiver/parental and medical leave, and health benefits to include medical, prescription drug, dental and vision coverage. Learn more at Pfizer Candidate Site - U.S. Benefits | (uscandidates.mypfizerbenefits.com). Pfizer compensation structures and benefit packages are aligned based on the location of hire. The United States salary range provided does not apply to Tampa, FL or any location outside of the United States.
Relocation assistance may be available based on business needs and/or eligibility.
Candidates must be authorized to be employed in the U.S. by any employer.
U.S. work visa sponsorship (such as TN, O-1, H-1B, etc.) is not available for this role now or in the future.
Sunshine Act
Pfizer reports payments and other transfers of value to health care providers as required by federal and state transparency laws and implementing regulations. These laws and regulations require Pfizer to provide government agencies with information such as a health care provider's name, address and the type of payments or other value received, generally for public disclosure. Subject to further legal review and statutory or regulatory clarification, which Pfizer intends to pursue, reimbursement of recruiting expenses for licensed physicians may constitute a reportable transfer of value under the federal transparency law commonly known as the Sunshine Act. Therefore, if you are a licensed physician who incurs recruiting expenses as a result of interviewing with Pfizer that we pay or reimburse, your name, address and the amount of payments made currently will be reported to the government. If you have questions regarding this matter, please do not hesitate to contact your Talent Acquisition representative.
EEO & Employment Eligibility
Pfizer is committed to equal opportunity in the terms and conditions of employment for all employees and job applicants without regard to race, color, religion, sex, sexual orientation, age, gender identity or gender expression, national origin, disability or veteran status. Pfizer also complies with all applicable national, state and local laws governing nondiscrimination in employment as well as work authorization and employment eligibility verification requirements of the Immigration and Nationality Act and IRCA. Pfizer is an E-Verify employer. This position requires permanent work authorization in the United States.
Pfizer endeavors to make www.pfizer.com/careers accessible to all users. If you would like to contact us regarding the accessibility of our website or need assistance completing the application process and/or interviewing, please email disabilityrecruitment@pfizer.com. This is to be used solely for accommodation requests with respect to the accessibility of our website, online application process and/or interviewing. Requests for any other reason will not be returned.
To learn more about acceptable and prohibited uses of AI during the recruitment process, please review our candidate AI-use guidelines available on Pfizer Careers.
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About Pfizer

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All over the world, Pfizer colleagues work together to positively impact health for everyone, everywhere. Our colleagues have the opportunity to grow and develop a career that offers both individual and company success; be part of an ownership culture that values diversity and where all colleagues are energized and engaged; and the ability to impact the health and lives of millions of people. Pfizer, a global leader in the biopharmaceutical industry, is continuously seeking top talent who are inspired by our purpose to innovate to bring therapies to patients that significantly improve their lives. Our Health and Science System Specialists Team provides leadership across patient care settings in the complex Hospital, Health System, and Key Medical Group environment to bring value to our customers and patients in this dynamic ecosystem.

Industry

Pharmaceutical and medicine manufacturing

Company size

10,000+ Employees

Headquarters location

New York, NY, US

Year founded

1849