1

Roche Sequencing Jobs (NOW HIRING)

Principal Software Development Engineer

Santa Clara, CA · On-site

$158K - $212K/yr

At Roche, we are working to make next-generation sequencing simple and accessible enough for routine use. By accelerating clinical research, streamlining workflows, and expanding assay menus, we are ...

At Roche you can show up as yourself, embraced for the unique qualities you bring. Our culture ... The Position Project Leader Sequencing Solution A healthier future. It's what drives us to innovate.

At Roche you can show up as yourself, embraced for the unique qualities you bring. Our culture ... Strong scientific and technical background preferable in Next Generation Sequencing (NGS) with ...

next page

Showing results 1-20

Roche Sequencing information

See salary details

$9

$18

$25

How much do roche sequencing jobs pay per hour?

As of Aug 13, 2026, the average hourly pay for roche sequencing in the United States is $18.57, according to ZipRecruiter salary data. Most workers in this role earn between $16.11 and $21.15 per hour, depending on experience, location, and employer.

What is Roche Sequencing?

Roche Sequencing is a division of Roche, a global healthcare company, that specializes in developing and providing advanced DNA sequencing technologies and solutions. Their products and services are used for clinical research, diagnostics, and personalized medicine, enabling scientists and clinicians to analyze genetic information more efficiently. Roche Sequencing offers a range of instruments, reagents, and software for next-generation sequencing (NGS) applications, supporting discoveries in genomics and helping improve patient care.

What types of projects do employees in Roche Sequencing typically work on, and how does collaboration occur across teams?

Employees at Roche Sequencing often engage in projects focused on developing and improving next-generation sequencing technologies, bioinformatics tools, and diagnostic solutions for healthcare. Collaboration is a key part of the work environment, with cross-functional teams consisting of scientists, engineers, software developers, and regulatory specialists working together throughout the project lifecycle. Regular meetings, interdisciplinary problem-solving sessions, and transparent communication channels help ensure that project goals are met efficiently. This collaborative structure provides opportunities for team members to expand their skills and gain exposure to multiple aspects of sequencing technology and product development.

What are the key skills and qualifications needed to thrive in a Roche Sequencing role, and why are they important?

To thrive in a Roche Sequencing role, you typically need a strong background in molecular biology, genetics, or a related field, often with a relevant degree or laboratory experience. Familiarity with next-generation sequencing (NGS) platforms, bioinformatics tools, and laboratory information management systems (LIMS) is essential. Strong analytical thinking, attention to detail, and effective collaboration skills help you interpret complex data and work within multidisciplinary teams. These competencies are crucial for ensuring accurate sequencing results, supporting research or clinical objectives, and maintaining high standards in genomics workflows.

What is the difference between Roche Sequencing vs Roche Molecular Diagnostics?

AspectRoche SequencingRoche Molecular Diagnostics
Required CredentialsLife sciences degree, sequencing certificationsMedical laboratory science degree, clinical diagnostics certifications
Work EnvironmentResearch labs, biotech companiesClinical labs, hospitals
Industry UsageGenomics research, personalized medicineInfectious disease, genetic testing

Roche Sequencing professionals focus on genomic research and sequencing technologies, often working in research labs and biotech settings. In contrast, Roche Molecular Diagnostics specialists work in clinical environments, performing diagnostic tests for diseases. Both roles require specialized certifications but serve different purposes within the healthcare and biotech industries.

More about Roche Sequencing jobs
What cities are hiring for Roche Sequencing jobs? Cities with the most Roche Sequencing job openings:
What states have the most Roche Sequencing jobs? States with the most job openings for Roche Sequencing jobs include:
Infographic showing various Roche Sequencing job openings in the United States as of August 2026, with employment types broken down into 89% Full Time, 8% Part Time, and 3% Contract. Highlights an 84% Physical, 3% Hybrid, and 13% Remote job distribution, with an average salary of $38,622 per year, or $18.6 per hour.

Principal Automation Research Engineer, Next Gen Sequencing Systems

Roche

Santa Clara, CA • Hybrid

Full-time

Posted 2 days ago

New


Roche rating

9.3

Company rating: 9.3 out of 10

Based on 23 frontline employees who took The Breakroom Quiz

3rd of 86 rated pharmaceutical


Job description

At Roche you can show up as yourself, embraced for the unique qualities you bring. Our culture encourages personal expression, open dialogue, and genuine connections, where you are valued, accepted and respected for who you are, allowing you to thrive both personally and professionally. This is how we aim to prevent, stop and cure diseases and ensure everyone has access to healthcare today and for generations to come. Join Roche, where every voice matters.

The Position

At Roche, we are developing the next-generation of sequencing systems. By accelerating clinical research, streamlining workflows, and expanding assay menus, we are also broadening access to genomic data and lowering barriers to adoption. From robust sample isolation and preparation tools to novel sequencing technology and advanced bioinformatics, we are developing differentiated, highly integrated end-to-end solutions for next-generation sequencing workflows.

Our Workflow Automation R&D Group, a part of Roche Sequencing Solutions, is focused on enhancing sequencing workflows. We are seeking a highly collaborative Principal Automation Research Engineer to contribute to the research and development of current and future automated platforms, while simultaneously building the tools to democratize key processes and eliminate bottlenecks.

This is a hands-on, multidisciplinary role focused on solving automation challenges, integrating AI tools to streamline workflows, and tackling the fluidic, mechanical and consumables challenges at the heart of our next-generation platforms. We are looking for someone who exhibits a high degree of motivation, independence, and resourcefulness to help us develop solutions to our automation challenges in a fast-paced and collaborative environment.

Core Responsibilities

  • You will utilize AI-assisted coding and modern software development tools to accelerate protocol generation, protocol simulation, debugging, test suite development, and automated error recovery.

  • You will translate complex manual workflows (i.e. sample prep, library prep, target enrichment, quantification, pooling, and sequencing) into highly reliable automated scripts.

  • You will test scripts and validate system performance through various analytical equipment and data analysis pipelines

  • You will contribute to architecture, design, research and development of next-generation automation platforms. Design, build, assemble and operate custom test fixtures to support testing of these platforms, modules and sub-systems.

  • You will translate high-level system and assay requirements into fluidic schematics, system architectures and concepts to evaluate, compare, and downselect design paths.

  • You will create and maintain comprehensive documentation for all work, from requirements, schematics, diagrams, CAD models, manufacturing drawings, and material specifications.

  • You will partner directly with Assay Development Scientists, Hardware Engineers, Software Developers, and Product Managers to align platform functionality with customer requirements. Conduct cross-functional concept, code/script and design reviews. Present progress, data, and engineering decisions clearly to stakeholders.

This position is based on-site in Santa Clara, CA. (This is not a hybrid position. There will be some travel to our Roche Pleasanton (CA) site.)
Relocation benefits are not being offered for this role.

Please include a cover letter with your application.

Who You Are:

(Required)

  • You have a degree in Bioengineering or Biomedical Engineering, or a closely related discipline, with relevant industry experience (7+ years for a Bachelor's, 5+ years for a Master's, or 3+ year for a PhD).

  • You have a demonstrated level of In-depth understanding of chemistry and molecular biology, specifically sequencing chemistry and workflows

  • You have demonstrated hands-on experience characterizing and testing complex automation systems for sequencing or diagnostics.

  • You have demonstrated hands-on experience using modern AI-assisted tools to accelerate code generation, parse schemas, and automate test cases.

  • You have demonstrated experience with markup and programming languages (e.g., XML, Python, or proprietary scripting environments) used to define automated instrument steps and hardware execution.

  • You have a solid level of experience in experimental design

  • You have a demonstrated level of proficiency with machine shop tools, measurement equipment, and rapid prototyping technologies.

  • You have demonstrated experience troubleshooting, with a solid understanding of physics, chemistry and engineering fundamentals.

Preferred Qualifications:

  • You have experience with DNA sequencing, DNA synthesizers and other complex fluidic automation instrumentation.

  • You have a demonstrated track record of acting as a bridge between scientists and the hardware/consumables engineers.

  • You have excellent organizational skills with the ability to manage multiple project tracks efficiently and thrive in ambiguous, fast-paced environments.

  • You have experience working with a sense of urgency, contagious optimism, and natural curiosity regarding technical, business, and market trends.

  • You have demonstrated experience in SolidWorks for part design, detailed assembly design and the creation of manufacturing drawings.

The expected salary range for this position based on the primary location of Santa Clara, CA is $110,600 - $205,500. Actual pay will be determined based on experience, qualifications, geographic location, and other job-related factors permitted by law. We encourage all qualified applicants to apply. The role's level (& title) may be adjusted based on experience and qualifications. A discretionary annual bonus may be available based on individual and Company performance.

This position also qualifies for the benefits detailed at the link provided below.

Benefits

Who we are

A healthier future drives us to innovate. Together, more than 100'000 employees across the globe are dedicated to advance science, ensuring everyone has access to healthcare today and for generations to come. Our efforts result in more than 26 million people treated with our medicines and over 30 billion tests conducted using our Diagnostics products. We empower each other to explore new possibilities, foster creativity, and keep our ambitions high, so we can deliver life-changing healthcare solutions that make a global impact.


Let's build a healthier future, together.

Roche is an equal opportunity employer. It is our policy and practice to employ, promote, and otherwise treat any and all employees and applicants on the basis of merit, qualifications, and competence. The company's policy prohibits unlawful discrimination, including but not limited to, discrimination on the basis of Protected Veteran status, individuals with disabilities status, and consistent with all federal, state, or local laws.

If you have a disability and need an accommodation in relation to the online application process, please contact us by completing this form Accommodations for Applicants.


What Roche employees say

Pay

Benefits

Hours and flexibility

Workplace

Get the full story on Breakroom