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Microscopy Scientist Jobs (NOW HIRING)

With experts in biomedical science, software engineering, and program management, we focus on ... What You'll Do * Prepare biological samples for electron microscopy (fixation, embedding ...

With experts in biomedical science, software engineering, and program management, we focus on ... What You'll Do * Prepare biological samples for electron microscopy (fixation, embedding ...

With experts in biomedical science, software engineering, and program management, we focus on ... What You'll Do * Prepare biological samples for electron microscopy (fixation, embedding ...

Materials Analyst, Microscopy

Phoenix, AZ · On-site

$26.25 - $32.50/hr

Our scientists and engineers support industries ranging from semiconductors and advanced ... The Advanced Microscopy team is seeking a Materials Analyst to join our Dual Beam (SEMFIB) group in ...

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Microscopy Scientist information

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$50.5K

$130.1K

$174K

How much do microscopy scientist jobs pay per year?

As of Jun 15, 2026, the average yearly pay for microscopy scientist in the United States is $130,117.00, according to ZipRecruiter salary data. Most workers in this role earn between $107,500.00 and $173,000.00 per year, depending on experience, location, and employer.

What is a Microscopy Scientist job?

A Microscopy Scientist is a specialist who utilizes various microscopy techniques to analyze materials, biological samples, or nanostructures at high magnifications. They work in research, quality control, and diagnostics across industries such as healthcare, pharmaceuticals, materials science, and biotechnology. Their responsibilities include operating and maintaining microscopes, preparing samples, interpreting data, and contributing to advancements in science and technology.

What are the key skills and qualifications needed to thrive in the Microscopy Scientist position, and why are they important?

To thrive as a Microscopy Scientist, you need a strong background in biology, materials science, or related fields, combined with expertise in advanced microscopy techniques and image analysis. Familiarity with instruments such as electron, confocal, or atomic force microscopes, as well as software like ImageJ or MATLAB, is typically required, and specialized training or certifications are advantageous. Attention to detail, problem-solving ability, and effective communication are standout soft skills for this role. These competencies enable accurate sample analysis, high-quality data production, and effective collaboration within multidisciplinary research and development teams.

What are the typical day-to-day responsibilities of a Microscopy Scientist?

As a Microscopy Scientist, your daily tasks often include preparing and analyzing samples, operating advanced microscopy equipment, capturing and interpreting images, and documenting findings. You may also spend time maintaining instruments, troubleshooting technical issues, and collaborating with researchers or engineers from other disciplines. Regularly presenting data, contributing to project meetings, and assisting with method development or protocol optimization are common as well. This mix of hands-on work and teamwork helps drive innovation and accurate results in both academic and industry settings.

More about Microscopy Scientist jobs
What cities are hiring for Microscopy Scientist jobs? Cities with the most Microscopy Scientist job openings:
What are the most commonly searched types of Microscopy Scientist jobs? The most popular types of Microscopy Scientist jobs are:
What states have the most Microscopy Scientist jobs? States with the most job openings for Microscopy Scientist jobs include:
Infographic showing various Microscopy Scientist job openings in the United States as of June 2026, with employment types broken down into 98% Full Time, and 2% Part Time. Highlights an 90% Physical, 3% Hybrid, and 7% Remote job distribution, with an average salary of $130,117 per year, or $62.6 per hour.

Electron Microscopy Specialist

Axle

Hamilton, MT

$70K - $80K/yr

Full-time

Medical, Dental, Vision, Retirement, PTO

Posted 24 days ago


Job description

(ID: 2026-1867)

Axle is a bioscience and information technology company that offers advancements in translational research, biomedical informatics, and data science applications to research centers and healthcare organizations nationally and abroad. With experts in biomedical science, software engineering, and program management, we focus on developing and applying research tools and techniques to empower decision-making and accelerate research discoveries. We work with some of the top research organizations and facilities in the country including multiple institutes at the National Institutes of Health (NIH).

Benefits We Offer:

  • 100% Medical, Dental & Vision Coverage for Employees
  • Paid Time Off and Paid Holidays
  • 401K match up to 5%
  • Educational Benefits for Career Growth
  • Employee Referral Bonus
  • Flexible Spending Accounts:
    • Healthcare (FSA)
    • Parking Reimbursement Account (PRK)
    • Dependent Care Assistant Program (DCAP)
    • Transportation Reimbursement Account (TRN)

About the Role

Axle is looking for an experienced Electron Microscopy Specialist to join our team supporting research at NIAID's Rocky Mountain Laboratories in Hamilton, Montana. In this role, you'll work closely with scientists in a collaborative, fast-paced environment, helping generate high-quality imaging data that supports infectious disease research.

This is a hands-on position for someone who enjoys both the technical side of electron microscopy and the collaborative nature of working with different research groups. If you have strong immuno-EM experience and are excited about learning and applying newer approaches like CLEM, FIB-SEM, and cryo-EM, this could be a great fit.

What You'll Do

  • Prepare biological samples for electron microscopy (fixation, embedding, sectioning, staining) and perform imaging and analysis.

  • Design and conduct immuno-electron microscopy (immuno-EM) experiments.

  • Operate and help maintain TEM and/or SEM instruments, including troubleshooting when needed.

  • Work closely with NIAID investigators to plan experiments, interpret results, and solve technical challenges.

  • Help bring new capabilities online, including techniques like CLEM, FIB-SEM, and cryo-EM.

  • Keep clear, well-organized records in line with NIH standards for rigor and reproducibility.

  • Train and support other lab members or facility users in EM techniques.

  • Contribute to the overall operation of the lab, including equipment upkeep and safety compliance.

What We're Looking For

  • Degree in a relevant field (Cell Biology, Structural Biology, Biophysics, or similar).

  • At least 5 years of relevant job experience in biological electron microscopy.

  • Solid understanding of EM sample preparation and imaging workflows.

  • Strong experience with immuno-electron microscopy.

  • Experience operating and troubleshooting EM instruments.

  • Someone who communicates well, works collaboratively, and is comfortable supporting multiple projects.

Nice to Have

  • Experience working in a shared resource or core facility.

  • Experience with, or strong interest in learning:

  • Correlative Light and Electron Microscopy (CLEM)

  • Focused Ion Beam-SEM (FIB-SEM)

  • Cryo-electron microscopy (cryo-EM)

  • Familiarity with image analysis tools.

What Makes Someone Successful in This Role

  • You're a team player who enjoys working with a range of scientists and projects.

  • You're curious and motivated to learn new techniques and technologies.

  • You're organized, detail-oriented, and take pride in producing high-quality data.

  • You can balance multiple priorities without losing track of the details.

Disclaimer: The above description is meant to illustrate the general nature of work and level of effort being performed by individuals assigned to this position or job description. This is not restricted as a complete list of all skills, responsibilities, duties, and/or assignments required. Individuals may be required to perform duties outside of their position, job description or responsibilities as needed.

The diversity of Axle's employees is a tremendous asset. We are firmly committed to providing equal opportunity in all aspects of employment and will not tolerate any illegal discrimination or harassment based on age, race, gender, religion, national origin, disability, marital status, covered veteran status, sexual orientation, status with respect to public assistance, and other characteristics protected under state, federal, or local law and to deter those who aid, abet, or induce discrimination or coerce others to discriminate.

Accessibility: If you need an accommodation as part of the employment process please contact: careers@axleinfo.com

This role has a market-competitive salary with an anticipated base compensation range listed below. Actual salaries will vary depending on a candidate's experience, qualifications, skills, and location.

#IND

Salary Range
$70,000—$80,000 USD