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Medical Software Engineer Jobs in Rochester, NY (NOW HIRING)

Paychex

Data Solutions Engineer

Rochester, NY · On-site +1

$91K - $156K/yr

We provide over 21 comprehensive rewards, including medical coverage, virtual wellness classes ... software engineering, systems integration, or a related field, with demonstrated expertise in ...

Pwc

NGA AI Engineer Manager

Rochester, NY

$73K - $244K/yr

... Computer Science, Software Engineering, Artificial Intelligence and Robotics preferred ... PwC offers a wide range of benefits, including medical, dental, vision, 401k, holiday pay, vacation ...

Pwc

NGA AI Engineer Senior Manager

Rochester, NY

$91K - $321K/yr

... Science, Software Engineering, Artificial Intelligence and Robotics preferred - Crafting and ... PwC offers a wide range of benefits, including medical, dental, vision, 401k, holiday pay, vacation ...

Paychex

HubSpot System Engineer

Rochester, NY · On-site +1

$58K - $92K/yr

Bachelor's Degree in Business or Computer Science - Preferred * 3 - 5 years software development ... We provide over 21 comprehensive rewards, including medical coverage, virtual wellness classes ...

Constellation Brands

Senior Database Engineer

Rochester, NY · On-site +1

$113K - $177K/yr

The ideal candidate is a skilled data / software engineer with experiencecreating data products ... We offer comprehensive package of benefits including paid time off, medical/dental/vision insurance ...

Pwc

US Tech - Lead Engineer

Rochester, NY · On-site

$73K - $244K/yr

Those in software engineering at PwC will focus on developing innovative software solutions to ... PwC offers a wide range of benefits, including medical, dental, vision, 401k, holiday pay, vacation ...

Pwc

Data Engineer - Senior Associate

Rochester, NY

$77K - $202K/yr

In data engineering at PwC, you will focus on designing and building data infrastructure and ... PwC offers a wide range of benefits, including medical, dental, vision, 401k, holiday pay, vacation ...

Ultra

Systems Engineer Senior II

Victor, NY

$134K - $167K/yr

Working closely with RF, Mechanical, Electrical, Acoustic, and Software Engineers, the Senior ... Medical and Prescription insurance * Dental insurance * Vision insurance * Supplemental Life ...

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Showing results 1-20

All JobsMedical Software Engineer JobsMedical Software Engineer Jobs in Rochester, NY

Medical Software Engineer information

See Rochester, NY salary details

$62.7K

$145.6K

$202.8K

How much do medical software engineer jobs pay per year?

As of Jun 10, 2026, the average yearly pay for medical software engineer in Rochester, NY is $145,557.00, according to ZipRecruiter salary data. Most workers in this role earn between $118,400.00 and $170,700.00 per year, depending on experience, location, and employer.

What are some common challenges faced by Medical Software Engineers when developing healthcare applications?

Medical Software Engineers often encounter challenges such as ensuring compliance with healthcare regulations (like HIPAA and FDA guidelines), integrating software with various electronic health record (EHR) systems, and maintaining data security and patient privacy. Additionally, they must work closely with clinicians and non-technical stakeholders to translate complex medical requirements into reliable, user-friendly software solutions. Balancing innovation with the need for rigorous testing and validation is also essential due to the critical nature of healthcare technology.

What is the difference between Medical Software Engineer vs Medical Device Software Engineer?

AspectMedical Software EngineerMedical Device Software Engineer
Required CredentialsBachelor's or higher in CS, Software Engineering, or related; certifications like CSTE or CSQE beneficialSimilar credentials; often requires knowledge of medical device regulations (e.g., FDA, ISO 13485)
Work EnvironmentHealthcare IT companies, software firms, hospitalsMedical device manufacturers, regulatory environments, clinical settings
Employer & Industry UsageHealthcare software solutions, electronic health records, telemedicineDesign, develop, and test software for medical devices like pacemakers, imaging equipment

The main difference is that Medical Software Engineers focus on healthcare software applications, while Medical Device Software Engineers specialize in software for medical devices. Both roles require similar technical skills and certifications but differ in their focus on device regulation and clinical application.

What are the key skills and qualifications needed to thrive as a Medical Software Engineer, and why are they important?

To thrive as a Medical Software Engineer, you need a strong background in software development, familiarity with healthcare standards (like HL7 or DICOM), and typically a degree in computer science, biomedical engineering, or a related field. Experience with programming languages (such as Python, Java, or C++), medical device software regulations (like FDA or ISO 13485), and health information systems is commonly required. Attention to detail, problem-solving skills, and effective communication are essential soft skills for collaborating with clinical teams and ensuring compliance. These competencies are crucial for developing safe, reliable, and compliant medical software that improves patient outcomes and meets regulatory requirements.

What is a medical software engineer?

A medical software engineer is a professional who designs, develops, and maintains software applications used in healthcare settings. Their work supports medical devices, hospital information systems, patient management platforms, and diagnostic tools. They collaborate closely with healthcare professionals to ensure the software meets regulatory standards and improves patient care. Medical software engineers must have expertise in both software development and an understanding of healthcare workflows and compliance requirements.
What are popular job titles related to Medical Software Engineer jobs in Rochester, NY? For Medical Software Engineer jobs in Rochester, NY, the most frequently searched job titles are:
What job categories do people searching Medical Software Engineer jobs in Rochester, NY look for? The top searched job categories for Medical Software Engineer jobs in Rochester, NY are:
What cities near Rochester, NY are hiring for Medical Software Engineer jobs? Cities near Rochester, NY with the most Medical Software Engineer job openings:
Medical Software Engineer jobs near you
Infographic showing various Medical Software Engineer job openings in Rochester, NY as of June 2026, with employment types broken down into 100% Full Time. Highlights an 57% In-person, 14% Hybrid, and 29% Remote job distribution, with an average salary of $145,557 per year, or $70 per hour.
Medical Engineer

Medical Engineer

Sapsol Technologies Inc

Rochester, NY

Contractor

Posted 12 days ago

Job description

This role supports the development, integration, and validation of advanced MRI methods across two research workstreams:

  • Oscillating Gradient Diffusion (OGSE/OGD) in collaboration with Vanderbilt University, and
  • FLORETbased UTE imaging (nonCartesian) in collaboration with Cincinnati Children's Hospital.

The engineer will coordinate program execution while contributing technically to pulse sequence implementation, image reconstruction and software refinement, and data processing within the Philips MRI research environment. The emphasis is on program oversight, technical coordination, and collaborative execution, rather than independent subjectmatter leadership in diffusion MRI or FLORET.

Note: This role focuses on technical engagement and delivery. It does not include clinical trial operations or regulatory ownership.

Core Responsibilities

A) Technical Development - Pulse Sequence (OGSE/OGD)

  • Refine and extend existing OGSE pulse sequence code in the Philips research environment.
  • Implement additional features, improve robustness, and ensure correct sequence functionality.
  • Support deployment and onscanner integration on Philips MRI systems.
  • Contribute to related data processing and image reconstruction workflows when required.

B) Image Reconstruction & Software Development (FLORET / NonCartesian)

  • Implement and validate nonCartesian MRI reconstruction pipelines (including those supporting FLORET UTE acquisitions).
  • Support software deployment and integration of reconstruction tools within Philips research systems.
  • Refine reconstruction workflows, add new features, and improve system interfaces and usability.
  • Perform data validation and quality checks; evaluate reconstruction stability and artifact behavior.

C) Experimental Collaboration & Validation

  • Coordinate experiment planning with Vanderbilt researchers, Cincinnati Children's teams, and clinical MRI staff.
  • Support execution of scanner experiments as needed.
  • Assist with validation of OGSE and FLORET acquisition outputs through systematic testing and comparative analysis.
  • Prepare technical validation summaries/reports and ensure outputs align with program deliverables and milestones.
  • Document results, assumptions, and change histories with strong discipline.

Qualifications

Required

  • Strong familiarity with vendorspecific MRI pulse sequence programming (preferably Philips research environments).
  • Solid foundations in MRI reconstruction, including nonCartesian methods, and software engineering.
  • Handson experience with C++ / Python / MATLAB for algorithm and tooling development.
  • Ability to collaborate effectively across industry and academic partners; clear written and verbal communication.
  • Proven ability to operate under hardware constraints and in structured, sprintbased execution models.

Preferred

  • Master's or PhD in MRI Physics, Biomedical Engineering, Medical Physics, Electrical Engineering, Computer Science, or related field.
  • Experience with Philips MRI research environments (e.g., research interfaces, integration workflows).
  • Exposure to OGSE/OGD diffusion methods and/or FLORET UTE imaging (deep expertise not required).
  • Experience with MRI data processing, QA/QC, and validation workflows.

Apply