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Medical Software Engineer Jobs in Rochester, NY (NOW HIRING)

B) Image Reconstruction & Software Development (FLORET / NonCartesian) * Implement and validate ... Master's or PhD in MRI Physics, Biomedical Engineering, Medical Physics, Electrical Engineering ...

B) Image Reconstruction & Software Development (FLORET / Non‑Cartesian) * Implement and validate ... Master's or PhD in MRI Physics, Biomedical Engineering, Medical Physics, Electrical Engineering ...

Associate Firmware Engineer

Fairport, NY · On-site

$78K - $88K/yr

The Associate Software Engineer will be involved in the design, development, and testing, for ... medical, dental, vision, disability, and life insurance-as well as the company's 401(k) plan ...

DevOps Engineer

Pittsford, NY

$50 - $68.50/hr

Company Description BCC Software develops innovative software and data solutions that power ... medical conditions), gender, sexual orientation, gender identity or expression (including ...

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Medical Software Engineer information

See Rochester, NY salary details

$62.7K

$145.6K

$202.8K

How much do medical software engineer jobs pay per year?

As of Jul 14, 2026, the average yearly pay for medical software engineer in Rochester, NY is $145,595.00, according to ZipRecruiter salary data. Most workers in this role earn between $118,400.00 and $170,700.00 per year, depending on experience, location, and employer.

What does a medical software engineer do?

A medical software engineer designs, develops, and tests software applications used in healthcare settings, such as electronic health records, medical imaging systems, and diagnostic tools. They often work with programming languages like Java or C++, adhere to healthcare regulations, and collaborate with medical professionals to ensure software safety and effectiveness.

Can you make $500,000 as a software engineer?

Medical software engineers with extensive experience, advanced skills in programming and healthcare systems, and working in high-paying regions or specialized roles can potentially earn $500,000 or more annually. Such salaries are typically achieved through senior positions, leadership roles, or working for large organizations with performance bonuses and stock options.

What engineers make $500,000?

Senior medical software engineers with extensive experience, specialized skills in healthcare systems, and advanced certifications can earn salaries approaching or exceeding $500,000 annually, especially in leadership roles or in high-demand environments. Compensation often includes base salary, bonuses, and stock options, particularly in large healthcare technology companies or startups.

What are some common challenges faced by Medical Software Engineers when developing healthcare applications?

Medical Software Engineers often encounter challenges such as ensuring compliance with healthcare regulations (like HIPAA and FDA guidelines), integrating software with various electronic health record (EHR) systems, and maintaining data security and patient privacy. Additionally, they must work closely with clinicians and non-technical stakeholders to translate complex medical requirements into reliable, user-friendly software solutions. Balancing innovation with the need for rigorous testing and validation is also essential due to the critical nature of healthcare technology.

What is the difference between Medical Software Engineer vs Medical Device Software Engineer?

AspectMedical Software EngineerMedical Device Software Engineer
Required CredentialsBachelor's or higher in CS, Software Engineering, or related; certifications like CSTE or CSQE beneficialSimilar credentials; often requires knowledge of medical device regulations (e.g., FDA, ISO 13485)
Work EnvironmentHealthcare IT companies, software firms, hospitalsMedical device manufacturers, regulatory environments, clinical settings
Employer & Industry UsageHealthcare software solutions, electronic health records, telemedicineDesign, develop, and test software for medical devices like pacemakers, imaging equipment

The main difference is that Medical Software Engineers focus on healthcare software applications, while Medical Device Software Engineers specialize in software for medical devices. Both roles require similar technical skills and certifications but differ in their focus on device regulation and clinical application.

What engineers make $300,000 a year?

Senior medical software engineers with extensive experience, specialized skills in healthcare technology, and advanced certifications can earn $300,000 or more annually. High salaries are often associated with leadership roles, working in large organizations, or in regions with high living costs, and may include bonuses and stock options.

What are the key skills and qualifications needed to thrive as a Medical Software Engineer, and why are they important?

To thrive as a Medical Software Engineer, you need a strong background in software development, familiarity with healthcare standards (like HL7 or DICOM), and typically a degree in computer science, biomedical engineering, or a related field. Experience with programming languages (such as Python, Java, or C++), medical device software regulations (like FDA or ISO 13485), and health information systems is commonly required. Attention to detail, problem-solving skills, and effective communication are essential soft skills for collaborating with clinical teams and ensuring compliance. These competencies are crucial for developing safe, reliable, and compliant medical software that improves patient outcomes and meets regulatory requirements.

What is a medical software engineer?

A medical software engineer is a professional who designs, develops, and maintains software applications used in healthcare settings. Their work supports medical devices, hospital information systems, patient management platforms, and diagnostic tools. They collaborate closely with healthcare professionals to ensure the software meets regulatory standards and improves patient care. Medical software engineers must have expertise in both software development and an understanding of healthcare workflows and compliance requirements.
What are popular job titles related to Medical Software Engineer jobs in Rochester, NY? For Medical Software Engineer jobs in Rochester, NY, the most frequently searched job titles are:
What job categories do people searching Medical Software Engineer jobs in Rochester, NY look for? The top searched job categories for Medical Software Engineer jobs in Rochester, NY are:
What cities near Rochester, NY are hiring for Medical Software Engineer jobs? Cities near Rochester, NY with the most Medical Software Engineer job openings:
Infographic showing various Medical Software Engineer job openings in Rochester, NY as of July 2026, with employment types broken down into 100% Full Time. Highlights an 57% In-person, 14% Hybrid, and 29% Remote job distribution, with an average salary of $145,595 per year, or $70 per hour.
Senior Specialist, Software Engineering

Senior Specialist, Software Engineering

L3Harris Technologies

Clarkson, NY

$97K - $180K/yr

Full-time

Medical, Retirement, PTO

Posted yesterday

New


Job description

L3Harris is dedicated to recruiting and developing high-performing talent who are passionate about what they do. Our employees are unified in a shared dedication to our customers’ mission and quest for professional growth. L3Harris provides an inclusive, engaging environment designed to empower employees and promote work-life success. Fundamental to our culture is an unwavering focus on values, dedication to our communities, and commitment to excellence in everything we do.

L3Harris is the Trusted Disruptor in defense tech. With customers’ mission-critical needs always in mind, our employees deliver end-to-end technology solutions connecting the space, air, land, sea and cyber domains in the interest of national security.

Job Title: Senior Specialist, Software Engineering

Job Code: 40836

Job Location: Rochester, NY or Plano, TX

 

Job Schedule: 9/80: Employees work 9 out of every 14 days – totaling 80 hours worked, and have every other Friday off

Job Description:

L3Harris is seeking embedded software engineers to work on a dynamic team to design, develop, integrate, and test embedded controls for Airborne Imaging systems.  They will work in a cross-functional team to develop, test & produce EO/IR solutions. Candidate will work closely with cross functional members of the engineering organization to develop and evaluate interfaces between hardware and software, and operational performance requirements and design of the overall system.

Essential Functions:

  • Design, develop, implement and test sensor control software
  • Utilize published OMS, UCI, XML Schema, reference designs & other standards for product development
  • Utilize MS Visual Studio, QNX, Linux, & XMLSpy development tools
  • Perform debugging and unit testing of software products
  • Perform system modeling, simulation and analysis on complex software
  • Conduct independent technical investigations of considerable complexity to improve system performance or solve difficult system requirements issues
  • Coordinate with other functional engineers to develop and test products; resolve compatibility and interface problems with other subsystems
  • Interface with other departments to participate in specification, design, code, and test reviews
  • Follow internal process to ensure proper conformance to established policies and procedures
  • Provide timely production support and problem resolution

Qualifications:

  • Bachelor’s Degree and minimum 6 years of prior relevant experience. Graduate Degree and a minimum of 4 years of prior related experience. In lieu of a degree, minimum of 10 years of prior related experience.
  • Active Secret US Security Clearance

Preferred Additional Skills:

  • Control system modeling using Matlab/Simulink
  • Experience with embedded security and encryption
  • Video transport and encoding (GigE Vision, H.264/265, MISB and SMPTE standards)
  • Video processing algorithms
  • Working knowledge of Bash/Python, Intel x86/ARM/FPGA/SoC, GPP, GPU, Embedded System Design, Release Engineering, Understanding of Change and Configuration Management, Debug/Trace Analysis, Real-time Operating Systems like VxWorks/LynxOS/Integrity, SELinux, Software Integration, Test, and Verification/Validation
  • The ability to understand and work with Network storage as well as an understanding of Gigabit Ethernet or InfiniBand.
  • Experience interacting with software development throughout the design cycle including major design reviews and architecture reviews.
  • Experience with Hardware and Software integration and test
  • DevSecOps and Test automation experience using Python or similar languages
  • Experience with APIs/BSPs/Drivers, OpenGL, health and status
  • Programming for Linux, Windows & QNX operating systems

In compliance with pay transparency requirements, the salary range for this role in New York state is $97,000 - $180,000. This is not a guarantee of compensation or salary, as final offer amount may vary based on factors including but not limited to experience and geographic location. L3Harris also offers a variety of benefits, including health and disability insurance, 401(k) match, flexible spending accounts, EAP, education assistance, parental leave, paid time off, and company-paid holidays. The specific programs and options available to an employee may vary depending on date of hire, schedule type, and the applicability of collective bargaining agreements.


#LI-CS2

L3Harris Technologies is proud to be an Equal Opportunity Employer. L3Harris is committed to treating all employees and applicants for employment with respect and dignity and maintaining a workplace that is free from unlawful discrimination. All applicants will be considered for employment without regard to race, color, religion, age, national origin, ancestry, ethnicity, gender (including pregnancy, childbirth, breastfeeding or other related medical conditions), gender identity, gender expression, sexual orientation, marital status, veteran status, disability, genetic information, citizenship status, characteristic or membership in any other group protected by federal, state or local laws. L3Harris maintains a drug-free workplace and performs pre-employment substance abuse testing and background checks, where permitted by law.

Please be aware many of our positions require the ability to obtain a security clearance. Security clearances may only be granted to U.S. citizens. In addition, applicants who accept a conditional offer of employment may be subject to government security investigation(s) and must meet eligibility requirements for access to classified information.

By submitting your resume for this position, you understand and agree that L3Harris Technologies may share your resume, as well as any other related personal information or documentation you provide, with its subsidiaries and affiliated companies for the purpose of considering you for other available positions.

L3Harris Technologies is an E-Verify Employer. Please click here for the E-Verify Poster in English or Spanish. For information regarding your Right To Work, please click here for English or Spanish.