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Medical Software Engineer Jobs in Rochester, NY (NOW HIRING)

Metrea

Embedded Software Engineer

Victor, NY · On-site

$126K - $165K/yr

Position Summary We are seeking a Software Engineer to join our busy team specializing in ... Comprehensive medical plan options * HSA/FSA accounts * Dental and vision coverage * 6% employer ...

D3 Embedded

Senior Embedded Software Engineer

Rochester, NY · On-site

$93K - $125K/yr

SENIOR EMBEDDED SOFTWARE ENGINEER Department: Product Design Services FLSA Status: Exempt Reports ... Medical and dental coverage * Employer paid basic life, short-term disability, and identity theft ...

Ultra Maritime

Sr Embedded Software Engineer

Victor, NY · On-site

$111K - $139K/yr

The Software Engineering experience with Ultra Maritime offers both a challenging and rewarding ... Medical and Prescription insurance * Dental insurance * Vision insurance * Supplemental Life ...

Ultra Maritime

Sr Embedded Software Engineer

Victor, NY · On-site

$111K - $139K/yr

The Software Engineering experience with Ultra Maritime offers both a challenging and rewarding ... Medical and Prescription insurance * Dental insurance * Vision insurance * Supplemental Life ...

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Showing results 21-40

All JobsMedical Software Engineer JobsMedical Software Engineer Jobs in Rochester, NY

Medical Software Engineer information

See Rochester, NY salary details

$62.7K

$145.6K

$202.8K

How much do medical software engineer jobs pay per year?

As of Sep 7, 2026, the average yearly pay for medical software engineer in Rochester, NY is $145,595.00, according to ZipRecruiter salary data. Most workers in this role earn between $118,400.00 and $170,700.00 per year, depending on experience, location, and employer.

What is a medical software engineer?

A medical software engineer is a professional who designs, develops, and maintains software applications used in healthcare settings. Their work supports medical devices, hospital information systems, patient management platforms, and diagnostic tools. They collaborate closely with healthcare professionals to ensure the software meets regulatory standards and improves patient care. Medical software engineers must have expertise in both software development and an understanding of healthcare workflows and compliance requirements.

What are some common challenges faced by medical software engineers when developing healthcare applications?

Medical Software Engineers often encounter challenges such as ensuring compliance with healthcare regulations (like HIPAA and FDA guidelines), integrating software with various electronic health record (EHR) systems, and maintaining data security and patient privacy. Additionally, they must work closely with clinicians and non-technical stakeholders to translate complex medical requirements into reliable, user-friendly software solutions. Balancing innovation with the need for rigorous testing and validation is also essential due to the critical nature of healthcare technology.

What are the key skills and qualifications needed to thrive as a medical software engineer, and why are they important?

To thrive as a Medical Software Engineer, you need a strong background in software development, familiarity with healthcare standards (like HL7 or DICOM), and typically a degree in computer science, biomedical engineering, or a related field. Experience with programming languages (such as Python, Java, or C++), medical device software regulations (like FDA or ISO 13485), and health information systems is commonly required. Attention to detail, problem-solving skills, and effective communication are essential soft skills for collaborating with clinical teams and ensuring compliance. These competencies are crucial for developing safe, reliable, and compliant medical software that improves patient outcomes and meets regulatory requirements.

What is the difference between Medical Software Engineer vs Medical Device Software Engineer?

AspectMedical Software EngineerMedical Device Software Engineer
Required CredentialsBachelor's or higher in CS, Software Engineering, or related; certifications like CSTE or CSQE beneficialSimilar credentials; often requires knowledge of medical device regulations (e.g., FDA, ISO 13485)
Work EnvironmentHealthcare IT companies, software firms, hospitalsMedical device manufacturers, regulatory environments, clinical settings
Employer & Industry UsageHealthcare software solutions, electronic health records, telemedicineDesign, develop, and test software for medical devices like pacemakers, imaging equipment

The main difference is that Medical Software Engineers focus on healthcare software applications, while Medical Device Software Engineers specialize in software for medical devices. Both roles require similar technical skills and certifications but differ in their focus on device regulation and clinical application.

How to break into medical software engineering?

Medical software engineering is a specialized field that requires a strong foundation in software development, knowledge of healthcare regulations, and familiarity with medical data standards like HL7 or DICOM. Gaining experience through relevant internships, obtaining certifications such as Certified Professional in Healthcare Quality (CPHQ), and developing skills in programming languages like Java, C++, or Python can improve job prospects. Understanding clinical workflows and working with electronic health record (EHR) systems are also valuable for entering this field.

What are popular job titles related to Medical Software Engineer jobs in Rochester, NY?

For Medical Software Engineer jobs in Rochester, NY, the most frequently searched job titles are:

What job categories do people searching Medical Software Engineer jobs in Rochester, NY look for?

The top searched job categories for Medical Software Engineer jobs in Rochester, NY are:

What cities near Rochester, NY are hiring for Medical Software Engineer jobs?

Cities near Rochester, NY with the most Medical Software Engineer job openings:

Medical Software Engineer jobs near you
Infographic showing various Medical Software Engineer job openings in Rochester, NY as of August 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $145,595 per year, or $70 per hour.

Senior Embedded Software Engineer

D3 Engineering, LLC

Rochester, NY • On-site

$93K - $125K/yr

Full-time

Medical, Dental, Vision, Life, Retirement

Re-posted 14 days ago

Key responsibilities

  • Lead the design, development, and optimization of software for embedded systems.

  • Assist with board bring-up, develop driver and application-level code, and perform system verification.

  • Conduct code reviews, oversee debugging, and provide technical direction for complex engineering projects.

Job description

SENIOR EMBEDDED SOFTWARE ENGINEER
Department: Product Design Services
FLSA Status: Exempt
Reports to: Operations Manager
Pay Range: $93,000 - $125,000 annually
Location: Rochester, NY
The Role:
D3 Embedded is seeking an experienced Senior Embedded Software Engineer to lead the design, development, and optimization of software for embedded systems. This role involves architecting and implementing firmware solutions, debugging complex system issues, and ensuring high performance and reliability. The ideal candidate has extensive experience with embedded C/C++, real-time operating systems (RTOS), Linux operating systems (Ubuntu, Yocto, etc), microcontroller architectures, System on Chip SoC architectures, and low-level hardware interactions. Strong problem-solving skills, leadership traits, and the ability to mentor junior engineers are essential. This position plays a critical role in driving innovation and advancing embedded technology in our products.
The Responsibilities:
  • All phases of the product development cycle including:
  • requirements definition and architecture
  • software design and development
  • Software implementation
  • hardware bring-up, software/hardware integration
  • verification and validation, and customer support
  • Embedded processors running real-time operating systems or Embedded Linux on custom electronics.
  • Technical tasks including;
  • assisting with board bring-up
  • developing driver and application-level code
  • system verification
  • Conduct and oversee code reviews, unit testing, debugging, and software/hardware integration.
  • Technical direction and leadership in a non-supervisory capacity for complex engineering projects
  • Support project planning efforts including task definition and work effort.
  • Develop and evaluate plans and criteria for various projects and activities you will do.
  • Embedded Linux platforms
  • Open-source Linux and associated SDKs
  • GCC/GNU toolchain
  • Developing & identifying tools / methods for better design reuse & process improvement
  • Design reviews and technical oversight
  • Coaching & mentoring less experienced engineers

Additional Responsibilities:
  • Other duties as assigned

The Right Person Will Have:
  • Bachelor of Science in Computer Science, Computer Engineering, Electrical Engineering discipline and/or equivalent years of experience
  • Minimum 5 years of experience in Embedded Software role
  • Excellent problem solving & troubleshooting skills.
  • Ability to read schematics and debug digital hardware using oscilloscope, logic analyzer, or similar tools for troubleshooting.
  • Experience writing embedded device drivers
  • Experience debugging embedded platforms
  • Knowledge of embedded software and firmware development, including C and C++.
  • Up to date experience with Embedded Linux platforms, configuration, board support package, kernel drivers, and device tree
  • Experience using GIT version control system
  • Experience developing with GCC/GNU toolchain
  • Experience with embedded camera and video processing is desirable.
  • Self-Driven personality
  • Capable of a big picture, system-oriented approach
  • Solid technical leadership skills
  • Strong communication and interpersonal skills.

The Benefits:
  • Competitive total compensation
  • Medical and dental coverage
  • Employer paid basic life, short-term disability, and identity theft coverage
  • Voluntary vision, life, long-term disability, accident, critical illness coverage
  • 401k retirement contribution
  • Paid holidays, time-off, and sick time
  • Tuition assistance and employer paid professional development
  • Flexible work schedules
  • Remote opportunities available
  • Complimentary snacks and beverages
  • Employer sponsored social events

The Company:
Since our founding in 1999, D3 Embedded has driven innovation in high-performance embedded systems development. We leverage our expertise in autonomous machines, sensors, imaging, optics, edge computing, algorithms, robotics, and electrification to provide cutting-edge engineering design and low-volume manufacturing services. Headquartered in Rochester NY, we serve a global network of customers and are proudly connected with many technology leaders and Fortune 500 companies. We are interested in bright, creative, and team-oriented individuals exhilarated by the opportunity to transform the world through frontier technologies.
Candidates must be eligible to work in the United States. D3 Embedded does not sponsor visas. For more information about D3 Embedded, please visit www.d3embedded.com.
D3 Embedded is committed to fostering a diverse work environment and proud to be an Equal Opportunity Employer. We consider and hire applicants without regard to race, color, religion, age, national origin, ancestry, ethnicity, gender, gender identity, gender expression, sexual orientation, marital status, veteran status, disability, genetic information, citizenship status, or membership in any other group protected by federal, state or local law.
D3 Embedded participates in E-Verify, a federal program that confirms employment eligibility upon hire.

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