Integrate experimental data with advanced quantum mechanical calculations, molecular dynamics simulations and free energy calculations to study protein motion, protein-ligand interactions, and ...
Integrate experimental data with advanced quantum mechanical calculations, molecular dynamics simulations and free energy calculations to study protein motion, protein-ligand interactions, and ...
Deep hands-on experience with molecular dynamics simulation, MM/GBSA, and free-energy perturbation methods for RBFE and ABFE. * Practical experience with open-source molecular simulation and free ...
Deep hands-on experience with molecular dynamics simulation, MM/GBSA, and free-energy perturbation methods for RBFE and ABFE. * Practical experience with open-source molecular simulation and free ...
Postdoctoral Scientist, Biophysics
Indianapolis, IN · On-site
$58K - $123K/yr
Integrate experimental data with advanced quantum mechanical calculations, molecular dynamics simulations and free energy calculations to study protein motion, protein-ligand interactions, and ...
Postdoctoral Scientist, Biophysics
Indianapolis, IN · On-site
$58K - $123K/yr
Integrate experimental data with advanced quantum mechanical calculations, molecular dynamics simulations and free energy calculations to study protein motion, protein-ligand interactions, and ...
Postdoctoral Scientist, Biophysics
Indianapolis, IN · On-site
$58K - $123K/yr
Integrate experimental data with advanced quantum mechanical calculations, molecular dynamics simulations and free energy calculations to study protein motion, protein-ligand interactions, and ...
Postdoctoral Scientist, Biophysics
Indianapolis, IN · On-site
$58K - $123K/yr
Integrate experimental data with advanced quantum mechanical calculations, molecular dynamics simulations and free energy calculations to study protein motion, protein-ligand interactions, and ...
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
AI Engineer - AI+CryoET
Campus, IL · On-site
This role is part of the AI+CryoET project within AI@HHMI, a multi-institutional project at the intersection of cryo-electron tomography (cryoET), molecular dynamics simulation, and machine learning.
AI Engineer - AI+CryoET
Campus, IL · On-site
This role is part of the AI+CryoET project within AI@HHMI, a multi-institutional project at the intersection of cryo-electron tomography (cryoET), molecular dynamics simulation, and machine learning.
AI Engineer - AI+CryoET
Ashburn, VA · On-site
This role is part of the AI+CryoET project within AI@HHMI, a multi-institutional project at the intersection of cryo-electron tomography (cryoET), molecular dynamics simulation, and machine learning.
AI Engineer - AI+CryoET
Ashburn, VA · On-site
This role is part of the AI+CryoET project within AI@HHMI, a multi-institutional project at the intersection of cryo-electron tomography (cryoET), molecular dynamics simulation, and machine learning.
AI Engineer - AI+CryoET
Campus, IL · On-site
This role is part of the AI+CryoET project within AI@HHMI, a multi-institutional project at the intersection of cryo-electron tomography (cryoET), molecular dynamics simulation, and machine learning.
AI Engineer - AI+CryoET
Campus, IL · On-site
This role is part of the AI+CryoET project within AI@HHMI, a multi-institutional project at the intersection of cryo-electron tomography (cryoET), molecular dynamics simulation, and machine learning.
Experience with first-principles, molecular dynamics, or surface reaction modeling * Exposure to feature-scale or device-relevant plasma simulations * Familiarity with multi-physics coupling and ...
Experience with first-principles, molecular dynamics, or surface reaction modeling * Exposure to feature-scale or device-relevant plasma simulations * Familiarity with multi-physics coupling and ...
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
Quick apply
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
Quick apply
Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart ...
Open Rank
Chapel Hill, NC · On-site
... and molecular dynamics simulations) is required. The successful candidate will develop a research program characterizing how genetic variants of neuroreceptors modulate medication binding and ...
Open Rank
Chapel Hill, NC · On-site
... and molecular dynamics simulations) is required. The successful candidate will develop a research program characterizing how genetic variants of neuroreceptors modulate medication binding and ...
Ability to work humbly with others, admitting mistakes and constructively working through differences in opinion. • Experience with molecular dynamics simulations and machine learning • ...
Ability to work humbly with others, admitting mistakes and constructively working through differences in opinion. • Experience with molecular dynamics simulations and machine learning • ...
Post Doctoral Fellow, Perilla Lab
Newark, DE · On-site
$47K - $65K/yr
Preference will be given to applications with expertise in 1) protein dynamics; 2) molecular dynamics simulations; and 3) high-performance computing environments. Prior programming experience is ...
Post Doctoral Fellow, Perilla Lab
Newark, DE · On-site
$47K - $65K/yr
Preference will be given to applications with expertise in 1) protein dynamics; 2) molecular dynamics simulations; and 3) high-performance computing environments. Prior programming experience is ...
The role requires deep technical expertise across AI for science protein and antibody design, AI-driven molecular dynamics, agentic AI and autonomous research systems, clinical trial simulations ...
The role requires deep technical expertise across AI for science protein and antibody design, AI-driven molecular dynamics, agentic AI and autonomous research systems, clinical trial simulations ...
Post Doctoral Fellow, Perilla Lab
Newark, DE · On-site
$47K - $65K/yr
Preference will be given to applications with expertise in 1) protein dynamics; 2) molecular dynamics simulations; and 3) high-performance computing environments. Prior programming experience is ...
Post Doctoral Fellow, Perilla Lab
Newark, DE · On-site
$47K - $65K/yr
Preference will be given to applications with expertise in 1) protein dynamics; 2) molecular dynamics simulations; and 3) high-performance computing environments. Prior programming experience is ...
SCIENTIST III
Tampa, FL · On-site
The role requires deep technical expertise across AI for science protein and antibody design, AI-driven molecular dynamics, agentic AI and autonomous research systems, clinical trial simulations ...
SCIENTIST III
Tampa, FL · On-site
The role requires deep technical expertise across AI for science protein and antibody design, AI-driven molecular dynamics, agentic AI and autonomous research systems, clinical trial simulations ...
SCIENTIST III
Birmingham, AL · On-site
The role requires deep technical expertise across AI for science protein and antibody design, AI-driven molecular dynamics, agentic AI and autonomous research systems, clinical trial simulations ...
SCIENTIST III
Birmingham, AL · On-site
The role requires deep technical expertise across AI for science protein and antibody design, AI-driven molecular dynamics, agentic AI and autonomous research systems, clinical trial simulations ...
Hourly Molecular Dynamics Simulation information
See salary details
$11K - $19.4K
0% of jobs
$19.4K - $27.8K
0% of jobs
$27.8K - $36.2K
0% of jobs
$36.2K - $44.6K
0% of jobs
$44.6K - $53K
0% of jobs
$53K - $61.5K
0% of jobs
$65.5K is the 25th percentile. Wages below this are outliers.
$61.5K - $69.9K
52% of jobs
$69.9K - $78.3K
15% of jobs
$78.3K - $86.7K
0% of jobs
$86.7K - $95.1K
1% of jobs
$96.9K is the 75th percentile. Wages above this are outliers.
$95.1K - $103.5K
32% of jobs
$11K
$80.7K
$103.5K
How much do hourly molecular dynamics simulation jobs pay per year?
What is an hourly molecular dynamics simulation job?
What is the difference between Hourly Molecular Dynamics Simulation vs Hourly Computational Chemist?
| Aspect | Hourly Molecular Dynamics Simulation | Hourly Computational Chemist |
|---|---|---|
| Required Credentials | Typically requires a degree in chemistry, physics, or related field; experience with simulation software | Requires a degree in chemistry, chemical engineering, or related; strong background in computational methods |
| Work Environment | Laboratory or research settings, often using specialized software for simulations | Office or lab, focusing on modeling, data analysis, and software development |
| Employer & Industry Usage | Research institutions, pharmaceutical companies, materials science firms | Pharmaceutical, chemical, and materials industries, research labs |
While both roles involve computational work in chemistry, Hourly Molecular Dynamics Simulation focuses specifically on simulating molecular interactions over time, whereas Hourly Computational Chemist may encompass a broader range of modeling and data analysis tasks. The roles often overlap in skills and industry settings, but their specific focus differs.
What are some common challenges faced by professionals working in hourly molecular dynamics simulation roles?
What are the key skills and qualifications needed to thrive as a molecular dynamics simulation specialist?
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- Freelance Molecular Dynamics Simulation
- Structural Biology
- Molecular Dynamics Simulations Postdoc
- Entry Level Postdoctoral Research Computational Chemistry

Full-time
Medical, Dental, Vision, Life, Retirement, PTO
Posted 12 days ago
Eli Lilly and Company rating
8.8
Based on 63 frontline employees who took The Breakroom Quiz
11th of 86 rated pharmaceutical
Job description
At Lilly, the work is demanding because patients are waiting. We unite caring with discovery to help make life better for people around the world, knowing that every decision, every detail, and every day matters. Headquartered in Indianapolis, Indiana, our over 50,000 employees around the globe take on complex challenges to discover and deliver life-changing medicines, strengthen how health is understood and managed, and support the communities we serve. This is hard, urgent, selfless work-but it's work worth doing. If you're driven by purpose and ready to bring your best to work that truly matters for patients, we invite you to join us.
Organization Overview:
For 150 years, scientists at Lilly have worked diligently to develop medicines that make life better for patients. These discoveries start in the Lilly Research Laboratories, where our scientists solve complex problems to develop new medicines that will help solve our world's greatest health challenges. We are looking for a highly motivated Postdoctoral Biophysical Chemist to join a cross-functional team in Indianapolis, IN to support our small molecule Early Molecule Discovery (EMD). Our team integrates biophysical and structural methods with computational approaches (i.e. quantum mechanics, molecular dynamics, free energy calculations, and AI/ML) to accelerate the identification and advancement of molecules to develop medicines.
Responsibilities:
The successful candidate will join an interactive, collaborative, and innovative cross-functional team to develop and apply integrative biophysical and computational methods that accelerate the discovery of new medicines.
- Execute biophysical and biomolecular NMR experiments to explore biomolecular energy landscapes and conformations.
- Integrate experimental data with advanced quantum mechanical calculations, molecular dynamics simulations and free energy calculations to study protein motion, protein-ligand interactions, and protein-protein interactions in support of structure-based drug design.
- Develop and implement novel AI and neural networks for analyzing experimental and molecular dynamics simulations into integrated structural models.
- Script and automate workflows across computational software platforms to maximize throughput and reproducibility of molecular calculations.
- Stay current with emerging methods in computational drug discovery, including AI and machine learning models for ligand binding and model building.
- Maintain critical timelines and communicate progress clearly through oral and written presentations at internal and external team meetings.
- Collaborate with discovery scientists to advance portfolio molecules from leads to quality drug candidates.
Basic Requirements:
- Ph.D. in Biophysical Chemistry, Biophysics, Computational Chemistry, or a related field.
- Strong foundation in biomolecular NMR with expertise in protein structure and dynamics.
- Demonstrated experience integrating experimental data with molecular dynamics.
- Qualified applicants must be authorized to work in the United States on a full-time basis. Lilly will not provide support for or sponsor work authorization or visas for this role, including but not limited to F-1 CPT, F-1 OPT, F-1 STEM OPT, J-1, H-1B, TN, O-1, E-3, H-1B1, or L-1.
Additional Skills/Preferences:
- Experience in generative AI, especially building and training neural networks (CNN, GNN, etc.)
- Experience with molecular dynamics simulations, quantum mechanical or free energy calculation methods applied to protein-ligand systems
- Proficiency in Python and/or other scientific scripting and programming languages
- Ability to work effectively both independently and in a collaborative team environment
- Experience working on an HPC or Cloud computing environment
- Experience integrating structural biology data (cryo-EM, X-ray crystallography, NMR or AI-predicted structures) with computational models
- Strong interpersonal, organizational, and problem-solving skills
Additional Information:
- This is an onsite position based in Indianapolis, Indiana
- This position is not permanent. It is a fixed-term position up to 2 years.
Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form (https://careers.lilly.com/us/en/workplace-accommodation) for further assistance. Please note this is for individuals to request an accommodation as part of the application process and any other correspondence will not receive a response.
Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.
Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia (AMECA), Black Employees at Lilly (BE@Lilly), Chinese Culture Network (CCN), EnAble, Evolve, Lilly Indian Network (LIN), Organization of Latinx at Lilly (OLA), Pride (LGBTQ+ Allies), Veterans Leadership Network (VLN) and Women's Initiative for Leading at Lilly (WILL).
Actual compensation will depend on a candidate's education, experience, skills, and geographic location. The anticipated wage for this position is
$58,000 - $123,200Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly's compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.
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About Eli Lilly
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Eli Lilly, based in Indianapolis, IN, US, is one of the pioneers in the pharmaceutical industry with a rich history dating back to 1876. This global pharmaceutical company focuses on discovering, developing, manufacturing and selling pharmaceutical products in approximately 120 countries. The company's product categories include endocrinology, oncology, cardiovascular, neuroscience, and immunology. Having invested over $9 billion in research and development in the past decade, Eli Lilly is also committed to creating high-quality medicines that meet real needs. As a recipient of several awards and recognitions, Eli Lilly is known for its focus on life-saving research and drug development. Their mission is to make medicines that help people live longer, healthier, and more active lives.
Industry
Pharmaceutical product wholesalers
Company size
10,000+ Employees
Headquarters location
Indianapolis, IN, US
Year founded
1876