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Healthcare Software Engineer Jobs in Madison, WI

Software Engineer

Sun Prairie, WI ยท On-site

$70K - $100K/yr

Our projects span the medical, agricultural, industrial, consumer, health and wellness, and ... We value curiosity, accountability, thoughtful communication, and people who care about both ...

As a Software Engineering Intern at Danaher, you'll work alongside experienced engineers developing diagnostic software that powers critical healthcare tools used across the globe. What You Might ...

As a Software Engineering Intern at Danaher, you'll work alongside experienced engineers developing diagnostic software that powers critical healthcare tools used across the globe. What You Might ...

As a Software Engineering Intern at Danaher, you'll work alongside experienced engineers developing diagnostic software that powers critical healthcare tools used across the globe. What You Might ...

Sr. Software Engineer

Madison, WI ยท On-site

$123K - $162K/yr

Abbott is a global healthcare leader that helps people live more fully at all stages of life. Our ... As a Sr. Software Engineer, this seasoned professional will demonstrate competence and creativity ...

New

Sr. Software Engineer

Madison, WI ยท On-site

$123K - $162K/yr

Abbott is a global healthcare leader that helps people live more fully at all stages of life. Our ... As a Sr. Software Engineer, this seasoned professional will demonstrate competence and creativity ...

New

Senior Software Engineer

Madison, WI ยท On-site

$123K - $162K/yr

Abbott is a global healthcare leader that helps people live more fully at all stages of life. Our ... As a Sr. Software Engineer, this seasoned professional will demonstrate competence and creativity ...

Senior Software Engineer

Madison, WI ยท On-site

$123K - $162K/yr

Abbott is a global healthcare leader that helps people live more fully at all stages of life. Our ... As a Sr. Software Engineer, this seasoned professional will demonstrate competence and creativity ...

Senior Software Engineer

Madison, WI

$123K - $162K/yr

Abbott is a global healthcare leader that helps people live more fully at all stages of life. Our ... As a Sr. Software Engineer, this seasoned professional will demonstrate competence and creativity ...

We are looking for Software Engineers to join our R&D team. If you have a Technical Bachelor ... Health benefits and PTO starting on day one * Retirement plans, including 401k, Roth, Employee ...

Give health. Make your mark in the fight against cancer. At Accuray, we make a direct and powerful ... Software Design & Architecture (Make the System Better) * Directoyimpactthe development and ...

Give health. Make your mark in the fight against cancer. At Accuray, we make a direct and powerful ... Software Design & Architecture (Make the System Better) * Directoy impact the development and ...

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Showing results 1-20

Healthcare Software Engineer information

See Madison, WI salary details

$64K

$148.6K

$207.1K

How much do healthcare software engineer jobs pay per year?

As of Aug 7, 2026, the average yearly pay for healthcare software engineer in Madison, WI is $148,649.00, according to ZipRecruiter salary data. Most workers in this role earn between $120,900.00 and $174,300.00 per year, depending on experience, location, and employer.

What is a healthcare software engineer?

A Healthcare Software Engineer designs, develops, and maintains software applications used in the healthcare industry. These applications may include electronic health records (EHRs), medical imaging systems, telemedicine platforms, and data analytics tools. Engineers in this field must ensure compliance with healthcare regulations like HIPAA while optimizing software for performance and security. They work closely with medical professionals to create user-friendly solutions that improve patient care and operational efficiency.

What does a healthcare software engineer do?

As a Healthcare Software Engineer, your responsibilities may include designing, developing, and maintaining applications that manage patient data, streamline workflows, and support healthcare providers in delivering care. You will typically work closely with clinicians, project managers, and QA specialists to gather requirements and ensure that software solutions meet both user and regulatory needs. Daily tasks might involve coding new features, troubleshooting issues, integrating with other healthcare systems, and testing software for security and compliance. This role offers exposure to impactful projects that directly improve patient outcomes, and provides opportunities to advance as a technical lead, solutions architect, or in health IT management.

What are the key skills and qualifications needed to thrive as a healthcare software engineer?

To thrive as a Healthcare Software Engineer, you need expertise in software development, knowledge of healthcare standards like HL7 or FHIR, and a degree in computer science or related fields. Familiarity with electronic health record (EHR) systems, compliance frameworks like HIPAA, and technologies such as Java, Python, or .NET is typically required, and certifications in healthcare IT can be advantageous. Strong problem-solving, communication, and teamwork skills help you translate clinical needs into technical solutions and work effectively with multidisciplinary teams. These qualifications are vital to ensure software meets complex healthcare requirements, supports patient safety, and maintains regulatory compliance.

What are the most commonly searched types of Healthcare Software Engineer jobs in Madison, WI? The most popular types of Healthcare Software Engineer jobs in Madison, WI are:
What job categories do people searching Healthcare Software Engineer jobs in Madison, WI look for? The top searched job categories for Healthcare Software Engineer jobs in Madison, WI are:
Infographic showing various Healthcare Software Engineer job openings in Madison, WI as of August 2026, with employment types broken down into 100% Full Time. Highlights an 49% In-person, and 51% Remote job distribution, with an average salary of $148,649 per year, or $71.5 per hour.

Software Engineer

i3 Product Development

Sun Prairie, WI โ€ข On-site

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 27 days ago


Job description

At i3 Product Development, we are a place for people who love to build, learn, and stay curious, especially when the problems are complex. As a Software Engineer, you will join a multidisciplinary team of designers, engineers, and problem-solvers working together under one roof to turn ideas into real, functioning products.


Our projects span the medical, agricultural, industrial, consumer, health and wellness, and recreation industries, so the technical challenges are always evolving. One project may involve developing a cloud-based application for a connected product; the next could focus on designing web services, integrating IoT devices, or solving a complex software architecture challenge. With more than 100 projects each year, the work is varied, fast-moving, and highly collaborative.


About the Role

This role is ideal for an experienced software engineer who enjoys technical problem-solving, systems thinking, and working directly with clients and cross-functional teams.


You will contribute throughout the full product development lifecycle; from reviewing requirements and shaping product features to architecting, developing, testing, deploying, and supporting software solutions. You will work closely with designers, mechanical engineers, electrical engineers, firmware engineers, project managers, and clients to create stable, maintainable applications and connected-product experiences.


We support our team with strong benefits, including a zero-deductible health plan, meaningful retirement match, and employee ownership, so you can focus on doing great work and growing your career.


What You Will Do

  • Review product requirements, develop project estimates, and break complex work into manageable tasks
  • Design, develop, test, and maintain stable, scalable software solutions
  • Design and implement cloud-based web applications, web services, and IoT solutions
  • Collaborate with clients to define product features, clarify technical requirements, and architect effective solutions
  • Troubleshoot and resolve software issues throughout development and after deployment
  • Participate in software architecture decisions and technical design discussions
  • Work within collaborative, Agile development teams
  • Contribute to code reviews, automated testing, continuous integration, and other software quality practices
  • Communicate technical concepts clearly to both technical and non-technical audiences
  • Continuously expand your skills through varied project work, emerging technologies, and shared learning


What We Are Looking For

  • Bachelor’s degree in Computer Science or a related discipline
  • Five or more years of professional experience designing, developing, testing, and debugging web-based software solutions
  • Strong software development fundamentals
  • Professional experience with Java, Python, or C#
  • Experience developing RESTful or SOAP web services
  • Experience deploying and managing web applications or services using AWS, Microsoft Azure, or Google Cloud
  • Experience working on software projects using Agile development methodologies
  • Proficiency with source control and development tools such as Git, continuous integration platforms, and automated testing frameworks
  • Strong problem-solving, collaboration, and technical communication skills
  • Ability to organize work, manage changing priorities, and maintain attention to both system-level goals and important technical details


Nice to Have

  • Experience architecting software systems
  • Experience leading software development projects or technical teams
  • Experience developing software for connected products or IoT applications
  • Experience collaborating with firmware, electrical, mechanical, or industrial design teams
  • Experience working directly with clients to shape product requirements and technical solutions
  • Experience contributing to software development standards, processes, or engineering best practices


Why i3

At i3, Software Engineers do not work in isolation. You will collaborate with multidisciplinary teams, interact directly with clients, and see your work move from early concept through launch.


We embrace new technologies and look for meaningful ways to apply them to real product challenges. We value curiosity, accountability, thoughtful communication, and people who care about both technical excellence and team success.


If you are energized by varied challenges, collaborative problem-solving, and the opportunity to create products that make a real impact, you will feel at home at i3.


Benefits and Perks

  • Health insurance with a zero-dollar deductible and employee premiums as low as nine dollars per pay period
  • Dental and vision coverage
  • 401(k) with dollar-for-dollar match up to six percent
  • Employee Stock Purchase Program
  • Company-paid short- and long-term disability insurance
  • Company-paid life insurance at two times annual salary
  • Flexible Spending Account
  • Health Savings Account
  • Paid time off
  • Paid holidays
  • Emergency Assistance Fund
  • Charitable Match Program


See Our Team in Action

Sneak peek behind the scenes:
https://www.youtube.com/watch?v=NXN9T-Ytzbo

The client experience with our Software team:
https://www.youtube.com/watch?v=Ar0QfYSzNv4