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Exome Sequencing Analyst Jobs (NOW HIRING)

... Analysis Program (BMAP) and the Nemours Genomics Laboratory. In addition to providing clinical ... Drive expansion into rapid whole-exome sequencing, genome-scale assays, and emerging genomics ...

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Exome Sequencing Analyst information

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$35K

$75.5K

$131K

How much do exome sequencing analyst jobs pay per year?

As of Sep 11, 2026, the average yearly pay for exome sequencing analyst in the United States is $75,517.00, according to ZipRecruiter salary data. Most workers in this role earn between $57,000.00 and $89,500.00 per year, depending on experience, location, and employer.

What does an exome sequencing analyst do?

An Exome Sequencing Analyst is responsible for processing and interpreting data obtained from exome sequencing, which targets the protein-coding regions of the genome. Their work involves using bioinformatics tools to identify genetic variants, assess their potential impact, and generate reports that support clinical or research objectives. Analysts often collaborate with geneticists, clinicians, and researchers to ensure accurate variant interpretation and help guide further investigations or patient care.

What are the key skills and qualifications needed to thrive as an exome sequencing analyst, and why are they important?

To thrive as an Exome Sequencing Analyst, you need a solid background in genetics, bioinformatics, and molecular biology, typically supported by a relevant degree such as in genomics or life sciences. Experience with next-generation sequencing (NGS) platforms, data analysis tools like GATK or ANNOVAR, and skills in programming languages such as Python or R are essential. Strong problem-solving skills, attention to detail, and effective communication are crucial soft skills for interpreting complex data and collaborating with multidisciplinary teams. These abilities ensure accurate genomic variant analysis, meaningful data interpretation, and effective contribution to research or clinical diagnostics.

What are some common challenges faced by exome sequencing analysts, and how can they be addressed?

Exome Sequencing Analysts often encounter challenges such as managing large volumes of sequencing data, ensuring data quality, and accurately interpreting genetic variants. Staying up-to-date with the latest bioinformatics tools and best practices is crucial to address these issues. Collaborating closely with molecular biologists, clinicians, and other bioinformaticians helps in troubleshooting complex cases and ensuring the most accurate results for patient care or research projects.

What is the difference between Exome Sequencing Analyst vs Genetic Data Analyst?

AspectExome Sequencing AnalystGenetic Data Analyst
Required CredentialsBachelor's or Master's in Genetics, Molecular Biology, or related field; experience with sequencing technologiesBachelor's or Master's in Bioinformatics, Genetics, or related; strong data analysis skills
Work EnvironmentLaboratories, research institutions, biotech companiesHealthcare, research, biotech firms, data-focused environments
Industry UsageGenomics, personalized medicine, research labsHealthcare analytics, research, biotech industry

While both roles involve genetic data analysis, Exome Sequencing Analysts focus specifically on sequencing data from exomes, interpreting genetic variants, and working closely with laboratory technologies. Genetic Data Analysts may work with broader genetic datasets, including genome-wide data, and often emphasize data management and statistical analysis. Both roles require strong bioinformatics skills but differ in their specific focus and work environment.

What are popular job titles related to Exome Sequencing Analyst jobs?

For Exome Sequencing Analyst jobs, the most frequently searched job titles are:

Infographic showing various Exome Sequencing Analyst job openings in the United States as of September 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $75,517 per year, or $36.3 per hour.

Molecular Pathologist

Wilmington, DE • On-site

Nemours
Health Care and Social Assistance • 1 - 5K employees

Other

Medical, Dental, Vision, Life, Retirement, PTO

Posted 6 days ago


Nemours Children's Health rating

8.1

Company rating: 8.1 out of 10

Based on 88 frontline employees who took The Breakroom Quiz


Job description

Nemours Children's Hospital, Delaware in Wilmington is seeking a Full-Time Molecular Pathologist to join our growing team.
The Molecular Pathologist will work within an integrated molecular diagnostics and genomics program supporting the Biobank and Molecular Analysis Program (BMAP) and the Nemours Genomics Laboratory. In addition to providing clinical interpretation of diagnostic assays, the Molecular Pathologist will oversee the development, validation, implementation, and quality management of molecular diagnostic testing, including next-generation sequencing (NGS)-based exome, genome, and targeted panel assays, as well as emerging molecular and genomic technologies.
This role is central to establishing compliant, high-quality molecular diagnostic services for pediatric patients while supporting innovative translational research initiatives. Responsibilities include in-house assay design, clinical validation, regulatory compliance, quality program oversight, policy and procedure development, and close collaboration with pathology, clinical, research, and bioinformatics teams in alignment with CAP and CLIA standards.
This opportunity offers:
Clinical and Diagnostic Leadership
  • Serve as the scientific and clinical lead for molecular pathology and genomics testing within BMAP and the Nemours Genomics Laboratory.
  • Direct clinical validation, implementation, and ongoing quality management of NGS-based assays, including somatic and germline testing.
  • Provide molecular pathology consultation and interpretation in close collaboration with pediatric subspecialists and pathology colleagues.
  • Ensure compliance with CAP, CLIA, New York State requirements if applicable, and institutional regulatory standards.
  • Participate in test utilization review, assay performance monitoring, and laboratory readiness for inspections and accreditation.
Assay Development and Innovation
  • Lead the development and validation of in-house NGS panels, including disease-focused, tumor, and pediatric precision medicine applications.
  • Drive expansion into rapid whole-exome sequencing, genome-scale assays, and emerging genomics technologies.
  • Evaluate and implement novel methodologies such as RNA sequencing, long-read sequencing, methylation profiling, spatial approaches, and multi-omics technologies as clinically and scientifically appropriate.
  • Collaborate with bioinformatics teams to ensure robust data analysis, interpretation, and reporting pipelines.
Research and Translational Integration
  • Support and develop translational research studies leveraging the institutional biobank and molecular platforms.
  • Partner with clinician-scientists and investigators on investigator-initiated and grant-funded research programs.
  • Contribute to scholarly activity, including publications, presentations, and participation in national or international consortia.
  • Facilitate responsible integration of research assays into clinical workflows when appropriate.
Other Non-Essential Functions
  • In partnership with BMAP's Collaborating Research Scientist and Medical Director in mentoring a team of laboratory manager(s) and research laboratory technologists.
  • Promote a culture of scientific rigor, collaboration, quality, and continuous improvement.
  • Work with institutional leadership on strategic planning, budgeting, staffing, and technology acquisition.
  • Contribute to institutional education through teaching, case conferences, and trainee mentorship.
  • Demonstrate expertise in NGS technologies, including assay validation and clinical implementation.
  • Maintain strong working knowledge of CAP and CLIA requirements for molecular and genomics laboratories.
  • Apply familiarity with bioinformatics workflows and variant interpretation frameworks to support clinical and translational genomics programs.
Our ideal candidate is board certified or board eligible in Molecular Genetic Pathology (ABP/ABMGG) or equivalent and demonstrates:
  • Expertise in NGS technologies, including assay validation and clinical implementation.
  • Strong working knowledge of CAP/CLIA requirements for molecular and genomics laboratories,
  • Prior experience working in a clinical molecular diagnostics laboratory
  • Experience with whole-exome or genome sequencing, rapid turnaround testing, or pediatric rare disease genomics.
  • Familiarity with bioinformatics workflows and variant interpretation frameworks. Track record of scholarly activity and academic collaboration.
What we offer
  • Growing area close to the Delaware beaches that offers NO state sales tax
  • Competitive salary and robust benefits package
  • A faculty appointment at Thomas Jefferson University, commensurate with academic achievement
  • Generous CME allowances along with licensure and dues allowance after hire
  • Comprehensive benefits: health, life, dental, vision, and 6-weeks paid family leave
  • Mortgage assistance, relocation packages, and 403(b) with employer match, plus 457(b) retirement savings plans
  • Not-for-profit status with eligibility for Public Service Loan Forgiveness
  • Tuition reimbursement & tuition discount programs with various Universities for Associates and their dependents

Situated on a beautiful estate in Wilmington, DE and close to Philadelphia and the surrounding suburbs, Nemours offers a unique opportunity to practice in a premier setting. The area is known for its top ranked school systems, recreational opportunities, family-oriented settings, access to world class restaurants, professional sports teams, and entertainment.
As a Nemours associate, you'll be part of an award-winning team where innovation is the norm. As a pediatric system with both clinical and academic partnerships, we are 100% focused on ensuring a healthier future for children. As one of the nation's leading pediatric health care systems, Nemours is committed to providing all children with their best chance to grow up healthy. We offer integrated, family-centered care to more than 280,000 children each year in our pediatric hospitals, specialty practices and primary care practices in Delaware, Florida, New Jersey, and Pennsylvania.
If you're looking for a position that will allow you to enjoy a work-life balance, have an opportunity for professional growth, and focus on pediatric care, this is the opportunity for you.
Additional information can be found at: https://www.nemours.org/well-beyond-medicine/the-moseley-institute.html .
About Us
Nemours Children's Health is an internationally recognized pediatric health system serving more than 1.7 million patient encounters each year. We deliver care across six states through two freestanding children's hospitals - Nemours Children's Hospital, Delaware and Nemours Children's Hospital, Florida - along with a network of more than 80 primary, urgent, and specialty care practices and more than 40 hospital partnerships.
Backed by the Nemours Foundation and Alfred I. duPont Trust, our $1.7B nonprofit system is dedicated to improving children's health through clinical care, research, education, advocacy, and prevention. Our Whole Child Health approach focuses equally on prevention and treatment, partnering with communities to help every child thrive.
Inclusion and belonging guide our strategy and growth. We are committed to culturally relevant care, reducing health disparities, and fostering an environment where every associate, patient, and family feels supported and valued.
Learn more at Nemours.org .

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About Nemours

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As one of the nation's leading pediatric health care systems, Nemours is committed to providing all children with their best chance to grow up healthy. We offer integrated, family-centered care to more than 300,000 children each year in our pediatric hospitals, specialty clinics, primary care practices, and school-based health centers in Delaware, Florida, Maryland, New Jersey and Pennsylvania. Nemours strives to ensure a healthier tomorrow for all children - even those who may never enter our doors - through our world-changing research, education and advocacy efforts.

Industry

Health care and social assistance and hospitals

Company size

1,001 - 5,000 Employees

Headquarters location

Jacksonville, FL, US