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Exome Sequencing Analyst Jobs (NOW HIRING)

Senior Clinical Scientist Whole Exome Sequencing Program (WES) GeneDx, Inc Gaithersburg, MD MD/PhD ... Expertise in pertinent areas such as Next-generation sequence analysis, online human genomics ...

Senior Clinical Scientist Whole Exome Sequencing Program (WES) GeneDx, Inc Gaithersburg, MD MD/PhD ... Expertise in pertinent areas such as Next-generation sequence analysis, online human genomics ...

$21.40 - $36.37/hr

This role focuses on working with large genomic datasets to analyze data from whole genome and exome sequencing, short- and long-read RNA sequencing, long-read genome sequencing, and epigenomics data.

Perform bioinformatic analysis of genomics data from next generation sequencing. Specific data types include whole exome sequencing (WES), whole exome sequencing (WGS), and targeted DNA and RNA panel ...

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Exome Sequencing Analyst information

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$35K

$75.5K

$131K

How much do exome sequencing analyst jobs pay per year?

As of Sep 9, 2026, the average yearly pay for exome sequencing analyst in the United States is $75,517.00, according to ZipRecruiter salary data. Most workers in this role earn between $57,000.00 and $89,500.00 per year, depending on experience, location, and employer.

What does an exome sequencing analyst do?

An Exome Sequencing Analyst is responsible for processing and interpreting data obtained from exome sequencing, which targets the protein-coding regions of the genome. Their work involves using bioinformatics tools to identify genetic variants, assess their potential impact, and generate reports that support clinical or research objectives. Analysts often collaborate with geneticists, clinicians, and researchers to ensure accurate variant interpretation and help guide further investigations or patient care.

What are the key skills and qualifications needed to thrive as an exome sequencing analyst, and why are they important?

To thrive as an Exome Sequencing Analyst, you need a solid background in genetics, bioinformatics, and molecular biology, typically supported by a relevant degree such as in genomics or life sciences. Experience with next-generation sequencing (NGS) platforms, data analysis tools like GATK or ANNOVAR, and skills in programming languages such as Python or R are essential. Strong problem-solving skills, attention to detail, and effective communication are crucial soft skills for interpreting complex data and collaborating with multidisciplinary teams. These abilities ensure accurate genomic variant analysis, meaningful data interpretation, and effective contribution to research or clinical diagnostics.

What are some common challenges faced by exome sequencing analysts, and how can they be addressed?

Exome Sequencing Analysts often encounter challenges such as managing large volumes of sequencing data, ensuring data quality, and accurately interpreting genetic variants. Staying up-to-date with the latest bioinformatics tools and best practices is crucial to address these issues. Collaborating closely with molecular biologists, clinicians, and other bioinformaticians helps in troubleshooting complex cases and ensuring the most accurate results for patient care or research projects.

What is the difference between Exome Sequencing Analyst vs Genetic Data Analyst?

AspectExome Sequencing AnalystGenetic Data Analyst
Required CredentialsBachelor's or Master's in Genetics, Molecular Biology, or related field; experience with sequencing technologiesBachelor's or Master's in Bioinformatics, Genetics, or related; strong data analysis skills
Work EnvironmentLaboratories, research institutions, biotech companiesHealthcare, research, biotech firms, data-focused environments
Industry UsageGenomics, personalized medicine, research labsHealthcare analytics, research, biotech industry

While both roles involve genetic data analysis, Exome Sequencing Analysts focus specifically on sequencing data from exomes, interpreting genetic variants, and working closely with laboratory technologies. Genetic Data Analysts may work with broader genetic datasets, including genome-wide data, and often emphasize data management and statistical analysis. Both roles require strong bioinformatics skills but differ in their specific focus and work environment.

What are popular job titles related to Exome Sequencing Analyst jobs?

For Exome Sequencing Analyst jobs, the most frequently searched job titles are:

Infographic showing various Exome Sequencing Analyst job openings in the United States as of September 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $75,517 per year, or $36.3 per hour.

Senior Clinical Scientist

Gaithersburg, MD • On-site

GeneDx, Inc
Health Care and Social Assistance • 11 - 50 employees

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Re-posted 3 days ago


GeneDx rating

9.3

Company rating: 9.3 out of 10

Based on 5 frontline employees who took The Breakroom Quiz

4th of 121 rated laboratories


Job description

Company Description
GeneDx is a rapidly growing CAP and CLIA certified diagnostic genetic testing laboratory for molecular genetics. Our historic mission has been to make clinical diagnostic testing available for people with genetic conditions and their families. We apply cutting edge technologies that provide a wide array of molecular genetic diagnostic tests, including whole exome sequencing and next generation sequencing panels. To learn more about GeneDx, please visit our website at www.genedx.com.
Job Description
Senior Clinical Scientist
Whole Exome Sequencing Program (WES)
GeneDx, Inc
Gaithersburg, MD
MD/PhD, or PhD and must be certified or eligible for certification by ABMG in Clinical Molecular Diagnostics
GeneDx is recruiting for a Senior Clinical Scientist for its Whole Exome Sequencing (WES) Program.
GeneDx is rapidly growing CLIA-Certified diagnostic genetics laboratory. We provide cutting edge technologies for genetic molecular diagnostics and offer vital, new-platform products in the critical area of molecular diagnostics. We specialize in genetic testing for rare hereditary disorders, but also test for common disorders. Our primary mission is to make clinical testing available to people with rare genetic conditions and their families. Because of our tremendous growth, we are in search a full time Senior Clinical Scientist to work on our exciting Whole Exome Sequencing Program.
This position offers a unique opportunity to closely work with a team of more than 50 molecular, clinical, cytogenetic and biochemical geneticists, genetic counselors, and bioinformaticians on identifying, researching and interpreting sequencing variants and assessing their clinical relevance, establishing phenotype-genotype links, reviewing a large spectrum of genetic disorders, reviewing and signing out detailed clinical test reports and communicating with referring physicians.
Qualifications
The successful candidate will have either an MD (US Medical License not required), MD/PhD, or PhD andmust be certified or eligible for certification by the American Board of Medical Genetics in Clinical Molecular Diagnostics, with 3-5 years post graduate practice in a clinical diagnostics setting. Fundamental knowledge of human genetics is essential. Appropriate judgment as it pertains to diagnostic and predictive testing, as well as excellent time management and communication skills are key. Expertise in pertinent areas such as Next-generation sequence analysis, online human genomics resources and molecular test design are a plus
Additional Information
All your information will be kept confidential according to EEO guidelines.
Benefits include:
  • Paid Time Off (vacation, sick, personal, holiday, jury duty, bereavement leave)
  • Health, dental, vision, life insurance, LT/ST disability plans
  • Flexible Spending Account (FSA)
  • Health Savings Account (HSA)
  • 401K retirement savings plan with a 4% company match and immediate vesting
  • Tuition Assistance
  • Employee Discounts (cell phone service, movie tickets, etc.)
  • Regular performance appraisals
  • Many promotions from within

Business casual, dog-friendly work environment

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