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Entry Level Protein Engineering Scientist Jobs (NOW HIRING)

$100 - $125/hr

## Associate Scientist, Protein EngineeringApplylocations: Cambridge, MA, UStime type: Full timeposted on: Posted Yesterdayjob requisition id: JR360Does it excite you to build a strong foundation in ...

$82K - $97K/yr

My client offers scientists genuine latitude to pursue creative endeavors and true research. My client seeks a Computational Protein Engineer to build and lead hands-on experimental programs while ...

Computational Protein Engineer

Rockville, MD · On-site

$113K - $134K/yr

My client offers scientists genuine latitude to pursue creative endeavors and true research. My client seeks a Computational Protein Engineer to build and lead hands-on experimental programs while ...

This role is ideal for a scientist who enjoys hands-on laboratory work and wants to directly ... Partner with the protein-engineering team to recommend molecule redesign and engineering solutions ...

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Entry Level Protein Engineering Scientist information

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$40.5K

$98.8K

$156.5K

How much do entry level protein engineering scientist jobs pay per year?

As of Sep 10, 2026, the average yearly pay for entry level protein engineering scientist in the United States is $98,759.00, according to ZipRecruiter salary data. Most workers in this role earn between $78,000.00 and $116,000.00 per year, depending on experience, location, and employer.

What does an entry level protein engineering scientist do?

An Entry Level Protein Engineering Scientist assists in the design, modification, and analysis of proteins to improve their properties for specific applications, such as drug development or industrial processes. They typically work in laboratories, conducting experiments, analyzing data, and collaborating with senior scientists to optimize protein function. Responsibilities may include molecular cloning, protein expression and purification, and using computational tools for protein modeling. This role often serves as a starting point for a career in biotechnology or pharmaceutical research, providing hands-on experience with advanced laboratory techniques and scientific problem-solving.

What are the key skills and qualifications needed to thrive as an entry level protein engineering scientist?

To thrive as an Entry Level Protein Engineering Scientist, you need a solid background in molecular biology, biochemistry, and protein engineering, typically supported by a relevant bachelor’s or master’s degree. Proficiency in laboratory techniques such as PCR, mutagenesis, chromatography, and familiarity with bioinformatics tools and software like PyMOL or BLAST is important. Attention to detail, strong analytical thinking, and effective teamwork enable you to excel in experimental design and data interpretation. These skills are crucial for advancing research goals, ensuring accurate results, and contributing to collaborative scientific projects.

What are some typical challenges faced by entry level protein engineering scientists when starting in the field?

Entry-level protein engineering scientists often encounter challenges such as adapting to complex laboratory protocols, mastering advanced analytical techniques, and interpreting experimental data accurately. Collaborating effectively within multidisciplinary teams and efficiently documenting research findings are also common hurdles. However, these challenges present valuable learning opportunities and, with mentorship and regular feedback, new scientists quickly build confidence and expertise.
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Infographic showing various Entry Level Protein Engineering Scientist job openings in the United States as of September 2026, with employment types broken down into 1% Internship, 90% Full Time, 6% Part Time, 2% Contract, and 1% Nights. Highlights an 83% Physical, 4% Hybrid, and 13% Remote job distribution, with an average salary of $98,759 per year, or $47.5 per hour.

Associate Scientist, Protein Engineering

On-site

$100 - $125/hr

Other

This job post has expired 2 days ago. Applications are no longer accepted.


Key responsibilities

  • Support purification of recombinant proteins to assist discovery programs from early research through lead-series selection

  • Assist with FPLC-based purification workflows, including size-exclusion, ion-exchange, and affinity chromatography, at analytical scale

  • Perform basic analytical characterization to help confirm protein identity, purity, and concentration


Job description

## Associate Scientist, Protein EngineeringApplylocations: Cambridge, MA, UStime type: Full timeposted on: Posted Yesterdayjob requisition id: JR360Does it excite you to build a strong foundation in modern protein purification and analytical technologies, and are you eager to grow your scientific career from the ground up? If this sounds like you, and you are ready to develop your skills in a new discovery organization, then you could be our new colleague.**Your new position** As an Associate Scientist or Scientist in Protein Purification and Analysis, you will play a foundational role supporting discovery programs through hands-on purification, analytical characterization, and data generation for protein-based therapeutics. This position offers an excellent opportunity to build technical proficiency in modern purification and analytical technologies at the inception of our new Cambridge, MA research center. This role suits a scientist earlier in their career with a foundational understanding of protein purification and analytical techniques, scientific curiosity, and a strong desire to grow in scope and responsibility.**We offer exciting responsibilities:*** Support purification of recombinant proteins to assist discovery programs from early research through lead-series selection* Assist with FPLC-based purification workflows, including size-exclusion (SEC), ion-exchange (IEX), and affinity chromatography, at analytical scale, under supervision* Perform basic analytical characterization to help confirm protein identity, purity, and concentration using standard analytical techniques* Support the routine execution of established purification and analytical workflows within Molecular Platform Development* Learn and apply automated and high-throughput purification and analytical workflow procedures* Assist senior colleagues with troubleshooting of routine purification and analytical issues, while building scientific and technical skills through feedback and mentorship**Your profile** You are early in your career, with a foundational understanding of protein purification and analytical techniques and a strong desire to grow in scope and responsibility. You thrive in a collaborative, multidisciplinary environment and are eager to learn from senior colleagues while contributing to discovery programs from day one. You communicate experimental data and results clearly and accurately.* BS or MS in Biochemistry, Chemistry, Molecular Biology, or a related field (Associate Scientist); PhD preferred (Scientist)* 1-2 years of relevant experience in protein purification and/or analytical chemistry (Associate Scientist); 2-3 years of relevant industry experience preferred (Scientist), depending on degree level* Foundational to working knowledge of protein purification techniques, such as FPLC-based chromatography (SEC, IEX, affinity)* Foundational to working knowledge of analytical characterization methods used to assess protein identity, purity, and concentration* Familiarity with standard laboratory practices for handling and analyzing protein samples* Willingness to learn additional techniques, including mass spectrometry, biophysical characterization, and automated/high-throughput workflows**Your new team** You will join Molecular Platform Development, a new organization created to strengthen and advance diverse drug modality capabilities in metabolic disease, based at our new Cambridge, MA research center. The site is a highly collaborative, multidisciplinary discovery hub integrating computational research, chemistry, and biology, and is deeply connected to the Greater Boston life sciences ecosystem.**Let's bond and be bold** We have a unique culture, characterized by excellent teamwork and strong engagement across the organization. And we want you to help us strengthen this culture.Making bonds is at the core of everything we do. From discovering and developing the best new peptide drugs for patients, to engaging with our partners or connecting with each other. We bond through curiosity and playfulness as a team, allowing ourselves to challenge common thinking and drive future innovation. Join us and let's bond and be bold.Salary Range: $85,000 - $125,000Interested in bonding with us? The applications will be reviewed as they come in. While a cover letter is not required, please include a few sentences in your CV explaining your motivation for applying. #J-18808-Ljbffr