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Clinical Genomic Variant Scientist Jobs (NOW HIRING)

JOB SUMMARY The Clinical Genomics Scientist II analyzes clinical genetics data, curates variants ... Familiarity with American College of Medical Genetics (ACMG) variant curation guidelines.

$77K - $120K/yr

This position is focused on supporting clinical genomic testing workflows for the diagnosis of ... Focus of the position is on all aspects of genetic variant analysis, curation, and interpretation.

$110K - $114K/yr

The Clinical Genomic Scientist II is highly proficient in variant classification guidelines and in following report generation protocols to meet requirements for quality and turnaround time. The ...

$110K - $114K/yr

The Clinical Genomic Scientist II is highly proficient in variant classification guidelines and in following report generation protocols to meet requirements for quality and turnaround time. The ...

Variant Scientist

$85K - $100K/yr

We are looking for a Variant Scientist who will work with our Clinical Teams on patient molecular reports for clinical utility. Please note: The Variant Science team works either Tuesday-Saturday or ...

Clinical Genomic Specialist

Chicago, IL · On-site

$110K - $140K/yr

Our team is composed of seasoned entrepreneurs, scientists, and operators, and we're backed by top ... Perform variant assessment and classification across proactive and rare disease whole genome ...

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Clinical Genomic Variant Scientist information

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$28

$54

$81

How much do clinical genomic variant scientist jobs pay per hour?

As of Aug 28, 2026, the average hourly pay for clinical genomic variant scientist in the United States is $54.75, according to ZipRecruiter salary data. Most workers in this role earn between $40.14 and $68.27 per hour, depending on experience, location, and employer.

What is a clinical genomic variant scientist?

A Clinical Genomic Variant Scientist is a specialist who analyzes and interprets genetic variants found in patient DNA to determine their clinical significance. They work closely with clinicians and genetic counselors to provide insights into how specific genetic changes may contribute to disease, influence treatment, or affect patient outcomes. Their role often involves reviewing genetic data, consulting scientific literature, and applying guidelines to classify variants as benign, pathogenic, or of uncertain significance. This work is crucial for precision medicine and informing patient care. Many Clinical Genomic Variant Scientists are employed in hospitals, diagnostic laboratories, or research institutions.

What are the key skills and qualifications needed to thrive as a clinical genomic variant scientist?

To thrive as a Clinical Genomic Variant Scientist, you need expertise in genetics, molecular biology, and bioinformatics, typically backed by an advanced degree in a life science field. Familiarity with next-generation sequencing (NGS) platforms, variant interpretation tools (like ClinVar or HGMD), and clinical reporting software is essential. Strong analytical thinking, attention to detail, and effective communication skills set top performers apart in this role. These competencies are crucial for accurately interpreting genetic data, ensuring reliable clinical reporting, and collaborating effectively with healthcare teams.

What are some common challenges clinical genomic variant scientists face when interpreting genetic data?

Clinical Genomic Variant Scientists often encounter challenges such as distinguishing between variants of uncertain significance and those with clear clinical relevance, due to the complexity and volume of genomic data. Staying up-to-date with rapidly evolving research and variant databases is crucial, as new discoveries can change the interpretation of previously classified variants. Collaboration with clinicians, genetic counselors, and bioinformaticians is essential to ensure accurate reporting and patient care. Additionally, maintaining rigorous documentation and adhering to clinical guidelines is key to ensuring high-quality results.

What is the difference between Clinical Genomic Variant Scientist vs Molecular Geneticist?

AspectClinical Genomic Variant ScientistMolecular Geneticist
CredentialsMaster's or PhD in genetics, genomics, or related field; certification may be preferredMaster's or PhD in genetics, molecular biology, or related field; certification optional
Work EnvironmentLaboratories, hospitals, research institutions focusing on clinical diagnosticsResearch labs, hospitals, or academic settings focusing on genetic research and testing
Employer & Industry UsageHealthcare providers, diagnostic labs, biotech companiesAcademic institutions, research organizations, clinical labs

The main difference is that Clinical Genomic Variant Scientists focus on interpreting genetic variants for clinical diagnostics, often working directly with patient data, while Molecular Geneticists may work more broadly in research or laboratory settings without direct clinical responsibilities.

How much do clinical genomic variant scientists make?

Clinical genomic variant scientists typically earn between $70,000 and $120,000 annually, depending on experience, education, and location. Salaries can increase with specialized skills, certifications, and working in high-demand healthcare or research environments.
More about Clinical Genomic Variant Scientist jobs
Infographic showing various Clinical Genomic Variant Scientist job openings in the United States as of August 2026, with employment types broken down into 3% As Needed, 74% Full Time, 15% Part Time, and 8% Contract. Highlights an 85% Physical, 1% Hybrid, and 14% Remote job distribution, with an average salary of $113,877 per year, or $54.7 per hour.

Clinical Variant Scientist - DLMP

Rochester, MN • Hybrid


Mayo Clinic
Hospitals • 10K+ employees

7.8

Company rating: 7.8 out of 10

Based on 702 frontline employees who took The Breakroom Quiz

130th of 895 rated healthcare providers

People enjoy working here

Good employer

Recommended by students


$88K - $132K/yr

Full-time

Medical, Dental, Vision, Retirement

Posted 8 days ago


Job description

Why Mayo Clinic

Mayo Clinic is top-ranked in more specialties than any other care provider according to U.S. News & World Report. As we work together to put the needs of the patient first, we are also dedicated to our employees, investing in competitive compensation and comprehensive benefit plans - to take care of you and your family, now and in the future. And with continuing education and advancement opportunities at every turn, you can build a long, successful career with Mayo Clinic.

Benefits Highlights
  • Medical: Multiple plan options.
  • Dental: Delta Dental or reimbursement account for flexible coverage.
  • Vision: Affordable plan with national network.
  • Pre-Tax Savings: HSA and FSAs for eligible expenses.
  • Retirement: Competitive retirement package to secure your future.

Responsibilities

The Variant Scientist functions in the clinical lab interpretive team, evaluating genomic test results to determine the pathogenicity and clinical significance of germline and somatic variants. The Variant Scientist evaluates functional, computational, and clinical data to assess variant pathogenicity, and summarizes pertinent data for patient reports. The Variant Scientist develops and maintains gene-level curation resources to support clinical test interpretation. The Variant Scientist participates as appropriate in gene/variant curation-focused publications, database submissions, professional collaborations, and presentations at professional meetings. The Variant Scientist plays an active role in education and training of laboratory fellows and residents, graduate students, lab staff, and other students and trainees. The Variant Scientist contributes to ongoing process improvement in interpretive workflows and participates in new test development and implementation.

At minimum, the variant scientist demonstrates proficiency applying ACMG/AMP variant classification guidelines for interpretation of SNVs and CNVs, and may include other variant classes such as mitochondrial variants, repeat expansions, and complex genomic findings. Variant scientists may also perform comprehensive technical evaluation of NGS data, including review of read-level evidence, coverage metrics, allele balance, structural variants, copy number variants, and other complex genomic findings using IGV and related visualization tools.

*Individuals hired to this position are required to complete 2 years in this position before becoming eligible to transfer to other positions within Mayo Clinic

"During the selection process you may participate in an OnDemand (pre-recorded) interview that you can complete at your convenience. During the OnDemand interview, a question will appear on your screen, and you will have time to consider each question before responding. You will have the opportunity to re-record your answer to each question - Mayo Clinic will only see the final recording. The complete interview will be reviewed by a Mayo Clinic staff member, and you will be notified of next steps."
 


Qualifications

MS, PhD, or equivalent in genetics, genetic counseling, molecular biology, or related field. Strong background in molecular genetics, human genetics, molecular pathology, or related medical specialties is necessary.

Additional Qualifications

Should have a good understanding of sequencing technologies (Sanger and next generation sequencing). A familiarity with professional standards for variant classification is preferred. Experience in germline and/or somatic variant curation using in silico analysis tools, variant databases, and primary literature evaluation is strongly desired. Must have a demonstrated ability to work in a fast-paced, team-based environment. The candidate must also display excellent oral and written communication skills, superior problem-solving and organizational skills, and strong attention to detail. Must have computer skills appropriate for laboratory practice. Skills in statistical analysis, bioinformatics, or complex data integration preferred. Appropriate licensure or other certification pertinent to the laboratory field may be required depending on the laboratory specialty.

Proficiency with interpretation and application of ACMG/AMP variant classification guidelines is necessary for this position. At least two years of experience in a Clinical Genomics Laboratory is preferred.


ALL MUST be included for your application to be considered:
   CV/Resume
   Cover Letter
   Transcripts (unofficial copy accepted)
   Internal candidates must provide their past performance appraisal


Exemption Status
Exempt
Compensation Detail
Compensation range is $88,004.80 -$132,080.00 / salary.
Benefits Eligible
Yes
Schedule
Full Time
Hours/Pay Period
80
Schedule Details
Monday - Friday, 8:00am - 5:00pm CT. This is a hybrid position and must be located within 100 miles of the Rochester Mayo Clinic campus for on-site expectations based on business needs.
Weekend Schedule
As Needed.
International Assignment
No
Site Description
Just as our reputation has spread beyond our Minnesota roots, so have our locations. Today, our employees are located at our three major campuses in Phoenix/Scottsdale, Arizona, Jacksonville, Florida, Rochester, Minnesota, and at Mayo Clinic Health System campuses throughout Midwestern communities, and at our international locations. Each Mayo Clinic location is a special place where our employees thrive in both their work and personal lives. Learn more about what each unique Mayo Clinic campus has to offer, and where your best fit is. 

Equal Opportunity

All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, gender identity, sexual orientation, national origin, protected veteran status or disability status. Learn more about the 'EOE is the Law'.  Mayo Clinic participates in E-Verify and may provide the Social Security Administration and, if necessary, the Department of Homeland Security with information from each new employee's Form I-9 to confirm work authorization.

Recruiter
Briana PriniskiQualifications:

MS, PhD, or equivalent in genetics, genetic counseling, molecular biology, or related field. Strong background in molecular genetics, human genetics, molecular pathology, or related medical specialties is necessary.

Additional Qualifications

Should have a good understanding of sequencing technologies (Sanger and next generation sequencing). A familiarity with professional standards for variant classification is preferred. Experience in germline and/or somatic variant curation using in silico analysis tools, variant databases, and primary literature evaluation is strongly desired. Must have a demonstrated ability to work in a fast-paced, team-based environment. The candidate must also display excellent oral and written communication skills, superior problem-solving and organizational skills, and strong attention to detail. Must have computer skills appropriate for laboratory practice. Skills in statistical analysis, bioinformatics, or complex data integration preferred. Appropriate licensure or other certification pertinent to the laboratory field may be required depending on the laboratory specialty.

Proficiency with interpretation and application of ACMG/AMP variant classification guidelines is necessary for this position. At least two years of experience in a Clinical Genomics Laboratory is preferred.


ALL MUST be included for your application to be considered:
   CV/Resume
   Cover Letter
   Transcripts (unofficial copy accepted)
   Internal candidates must provide their past performance appraisal


Mayo Clinic logo

About Mayo Clinic

Sourced by ZipRecruiter

Mayo Clinic is the largest integrated, not-for-profit medical group practice in the world. We're building the future, one where the best possible care is available to everyone — and more people can heal at home. Our relentless research turns into earlier diagnoses and new cures. That's how we inspire hope in those who need it most. At Mayo Clinic, experts work together to solve the most challenging unmet needs of patients. Our history of innovation dates back almost 150 years, when brothers Will and Charlie Mayo pioneered an integrated, team-based approach to medicine. Today, that trailblazing spirit drives innovations like Mayo Clinic Platform — which powers new technologies to change how care is delivered to all.

Industry

Hospitals

Company size

10,000+ Employees

Headquarters location

Rochester, MN, US

Year founded

1919


What Mayo Clinic employees say

Pay

Benefits

Hours and flexibility

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