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Cheminformatics Junior Jobs (NOW HIRING)

Manage day-to-day operations of the Computational Theoretical Chemistry Team, mentor junior staff ... Familiarity with cheminformatics toolkits such as RDKit for molecular property prediction and data ...

Manage day-to-day operations of the Computational Theoretical Chemistry Team, mentor junior staff ... Familiarity with cheminformatics toolkits such as RDKit for molecular property prediction and data ...

PhD (or MS + 2 yrs / BS + 4 yrs equivalent experience) in Bioinformatics, Cheminformatics, Computer ... Experience mentoring and guiding junior researchers or engineers. Lilly is dedicated to helping ...

PhD (or MS + 2 yrs / BS + 4 yrs equivalent experience) in Bioinformatics, Cheminformatics, Computer ... Experience mentoring and guiding junior researchers or engineers. Lilly is dedicated to helping ...

Mentor computational chemists and junior CADD scientists; partner with the Head of Advanced Machine ... Strong Python and at least one core cheminformatics toolkit (e.g. RDKit, OpenEye); real experience ...

PhD (or MS + 2 yrs / BS + 4 yrs equivalent experience) in Bioinformatics, Cheminformatics, Computer ... Experience mentoring and guiding junior researchers or engineers. Lilly is dedicated to helping ...

PhD (or MS + 2 yrs / BS + 4 yrs equivalent experience) in Bioinformatics, Cheminformatics, Computer ... Experience mentoring and guiding junior researchers or engineers. Lilly is dedicated to helping ...

Manage day-to-day operations of the Computational Theoretical Chemistry Team, mentor junior staff ... Familiarity with cheminformatics toolkits such as RDKit for molecular property prediction and data ...

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Cheminformatics Junior information

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$33.5K

$71.8K

$109.5K

How much do cheminformatics junior jobs pay per year?

As of Jun 8, 2026, the average yearly pay for cheminformatics junior in the United States is $71,799.00, according to ZipRecruiter salary data. Most workers in this role earn between $48,500.00 and $80,000.00 per year, depending on experience, location, and employer.

What are some common challenges a Cheminformatics Junior might face when transitioning from academia to an industry role?

As a Cheminformatics Junior entering industry, you may encounter challenges such as adapting to faster project timelines and balancing multiple assignments simultaneously. Unlike academic settings, industry projects often require you to collaborate closely with multidisciplinary teams, including chemists, data scientists, and IT professionals. You will also need to learn new software tools or databases specific to your company's workflow, and prioritize tasks based on business goals rather than research interests. Embracing teamwork, effective communication, and agile learning will help you succeed in this environment.

What is the difference between Cheminformatics Junior vs Data Analyst?

AspectCheminformatics JuniorData Analyst
Required CredentialsBachelor's in Chemistry, Bioinformatics, or related fieldBachelor's in Statistics, Data Science, or related field
Work EnvironmentResearch labs, pharmaceutical companies, biotech firmsBusiness, finance, healthcare sectors
Employer & Industry UsageUsed in drug discovery, chemical data managementUsed in market analysis, reporting, data visualization

The Cheminformatics Junior role focuses on chemical data and drug discovery, requiring chemistry-related credentials, while Data Analysts handle broader data sets across industries. Both roles involve data management but serve different industry needs and skill sets.

What are the key skills and qualifications needed to thrive as a Cheminformatics Junior, and why are they important?

To thrive as a Cheminformatics Junior, you need a solid background in chemistry, computer science, and data analysis, typically supported by a relevant degree. Familiarity with cheminformatics software (such as RDKit, Open Babel), programming languages like Python, and experience handling chemical databases are commonly required. Strong analytical thinking, attention to detail, and effective communication are valuable soft skills in this role. These abilities enable accurate data interpretation, support collaborative research, and facilitate the development of computational solutions in chemical informatics.

What is a Cheminformatics Junior?

A Cheminformatics Junior is an entry-level professional who applies information technology and computer science techniques to solve problems in chemistry, particularly in drug discovery, chemical data analysis, and molecular modeling. They assist in managing and analyzing chemical data, developing software tools, and supporting research projects under the guidance of senior cheminformaticians. Their work often involves database management, data visualization, and basic programming, making them a vital part of modern chemical and pharmaceutical research teams.
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Computational Theoretical Chemist III

1910

Boston, MA

Other

Posted 12 days ago


Job description

Computation is revolutionizing drug discovery. Advances in big chemical data, massive computing power, artificial intelligence, and molecular dynamics simulation are changing the way we develop new drugs. At 1910 , we put computation at the heart of drug discovery, blending expertise in computational chemistry, structural biology, pharmacology, data science, and software engineering to develop drugs for previously undruggable targets. 

Role description  

  • Own computational chemistry programs across therapeutic modalities, disease targets, and indications 
  • Ensure effective collaboration with the Biology and Medicinal Chemistry teams by providing key computational chemistry insights to aid in the Hit-to-Lead and Lead Optimization phases of drug discovery operations  
  • Ensure effective collaboration with the ML Engineering and AI Research team by providing key computational chemistry insights to aid in the development of AI/ML models for drug discovery as well as the incorporation of those models into drug discovery operations 
  • Teach key computational chemistry principles to your cross-disciplinary colleagues from Medicinal Chemistry, AI Research, Machine Learning Engineering, Cell Biology, and Pharmacology 
  • Manage day-to-day operations of the Computational Theoretical Chemistry Team, mentor junior staff, and represent the team in senior leadership meetings 
  • Partner to improve 1910's existing process for progressing from computational hit to experimental hit to lead to drug candidate 
  • Co-author provisional patents and peer-reviewed research papers 
  • Progress a virtual hit to a biochemical/cellular hit 
  • Validate a cellular hit in a clinically relevant animal model of disease 
  • Update provisional patents with the animal model data 
  • Nominate a lead candidate for progression into IND-enabling studies 
  • Attend and present research at conferences and events related to computational modeling in drug discovery 

Qualifications  

  • Ph.D. in computational chemistry or related discipline 
  • 3+ years of relevant industry experience within drug discovery or biotechnology 
  • Played a key role in advancing a drug discovery program from early research phases to clinical development. 
  • In-depth knowledge and hands-on experience with quantum chemical (QC) methods, including semi-empirical and density functional theory (DFT) approaches, molecular dynamics (MD) simulations, including both standard MD and enhanced sampling techniques such as metadynamics, umbrella sampling, and replica exchange MD, free energy simulations such as FEP and TI, and QM/MM methodologies for small and large molecular systems 
  • Strong understanding of key concepts, including potential energy surfaces (PES), intermolecular and intramolecular forces/interactions, force fields, molecular properties, thermodynamic properties, solvation models (implicit/explicit), and conformational sampling 
  • Proficiency in analyzing molecular properties such as solvation free energy, dipole moments, vibrational frequencies, electrostatic potential, charge distribution, and more. 
  • Deep knowledge of implicit and explicit solvent models, with extensive experience modeling solvent effects on molecular systems and chemical reactions in various environments 
  • Extensive experience in using and troubleshooting software tools for QC calculations (e.g., ORCA, xTB, CREST, etc.), MD simulations (e.g., GROMACS, OpenMM, etc.), Drug Design Development Packages (e.g., EG, Schrodinger, MOE, CRESSET) 
  • Experience working with HPC Clusters and cloud-based services like (e.g., Microsoft AZURE, AWS) 
  • Ability to optimize computational simulation protocols for efficient resource usage 
  • Proven experience working with small organic molecules and large biomolecular systems (e.g., peptides, proteins, etc.) for property prediction, conformational analysis, and structure-activity relationships (SAR) 
  • Hands-on experience with Python and Bash scripting for automating workflows and data analysis 
  • Familiarity with cheminformatics toolkits such as RDKit for molecular property prediction and data management 
  • Basic knowledge of machine learning (ML) techniques applied to molecular property prediction, virtual screening, and related tasks 
  • Strong desire to collaborate with AI scientists, data scientists, medicinal chemists, and biologists to interpret computational results and guide experimental design 
  • Clear and effective communication of complex scientific ideas through reports, presentations, and publications 

Nice to Haves 

  • Publications in computational chemistry related to drug discovery 

 #LI-Onsite