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Cheminformatics Junior Jobs (NOW HIRING)

Manage day-to-day operations of the Computational Theoretical Chemistry Team, mentor junior staff ... Familiarity with cheminformatics toolkits such as RDKit for molecular property prediction and data ...

Manage day-to-day operations of the Computational Theoretical Chemistry Team, mentor junior staff ... Familiarity with cheminformatics toolkits such as RDKit for molecular property prediction and data ...

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Cheminformatics Junior information

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$33.5K

$71.8K

$109.5K

How much do cheminformatics junior jobs pay per year?

As of Aug 16, 2026, the average yearly pay for cheminformatics junior in the United States is $71,799.00, according to ZipRecruiter salary data. Most workers in this role earn between $48,500.00 and $80,000.00 per year, depending on experience, location, and employer.

What are some common challenges a cheminformatics junior might face when transitioning from academia to an industry role?

As a Cheminformatics Junior entering industry, you may encounter challenges such as adapting to faster project timelines and balancing multiple assignments simultaneously. Unlike academic settings, industry projects often require you to collaborate closely with multidisciplinary teams, including chemists, data scientists, and IT professionals. You will also need to learn new software tools or databases specific to your company's workflow, and prioritize tasks based on business goals rather than research interests. Embracing teamwork, effective communication, and agile learning will help you succeed in this environment.

What is the difference between Cheminformatics Junior vs Data Analyst?

AspectCheminformatics JuniorData Analyst
Required CredentialsBachelor's in Chemistry, Bioinformatics, or related fieldBachelor's in Statistics, Data Science, or related field
Work EnvironmentResearch labs, pharmaceutical companies, biotech firmsBusiness, finance, healthcare sectors
Employer & Industry UsageUsed in drug discovery, chemical data managementUsed in market analysis, reporting, data visualization

The Cheminformatics Junior role focuses on chemical data and drug discovery, requiring chemistry-related credentials, while Data Analysts handle broader data sets across industries. Both roles involve data management but serve different industry needs and skill sets.

What are the key skills and qualifications needed to thrive as a cheminformatics junior?

To thrive as a Cheminformatics Junior, you need a solid background in chemistry, computer science, and data analysis, typically supported by a relevant degree. Familiarity with cheminformatics software (such as RDKit, Open Babel), programming languages like Python, and experience handling chemical databases are commonly required. Strong analytical thinking, attention to detail, and effective communication are valuable soft skills in this role. These abilities enable accurate data interpretation, support collaborative research, and facilitate the development of computational solutions in chemical informatics.

What is a cheminformatics junior?

A Cheminformatics Junior is an entry-level professional who applies information technology and computer science techniques to solve problems in chemistry, particularly in drug discovery, chemical data analysis, and molecular modeling. They assist in managing and analyzing chemical data, developing software tools, and supporting research projects under the guidance of senior cheminformaticians. Their work often involves database management, data visualization, and basic programming, making them a vital part of modern chemical and pharmaceutical research teams.
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Cities with the most Cheminformatics Junior job openings:

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What states have the most Cheminformatics Junior jobs?

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Infographic showing various Cheminformatics Junior job openings in the United States as of August 2026, with employment types broken down into 9% Full Time, and 91% Part Time. Highlights an 7% Physical, 1% Hybrid, and 92% Remote job distribution, with an average salary of $71,799 per year, or $34.5 per hour.

Scientific Director, Computational Chemistry

Neurocrine Biosciences, Inc.

San Diego, CA • On-site

Full-time

Medical, Dental, Vision, Retirement, PTO

Re-posted 15 days ago


Job description

Who We Are:
Neurocrine Biosciences is a leading biopharmaceutical company with a simple purpose: to relieve suffering for people with great needs. We are dedicated to discovering, developing and commercializing life-changing treatments for patients with under-addressed neurological, psychiatric, endocrine and immunological disorders. The company's diverse portfolio includes FDA-approved treatments for tardive dyskinesia, chorea associated with Huntington's disease, classic congenital adrenal hyperplasia, hyperphagia in patients with Prader-Willi syndrome, endometriosis* and uterine fibroids*, as well as a robust pipeline including multiple compounds in mid- to late-phase clinical development across our core therapeutic areas. For more than three decades, we have applied our unique insight into neuroscience and the interconnections between brain and body systems to treat complex conditions. We relentlessly pursue medicines to ease the burden of debilitating diseases and disorders, because you deserve brave science. For more information, visit neurocrine.com, and follow the company on LinkedIn, X, Facebook and YouTube. (*in collaboration with AbbVie)
About the Role:
Develops and leads innovative computational strategies that accelerate drug discovery across a Research and Development portfolio from early discovery through clinical candidate nomination. Integrates computational approaches including molecular modeling, cheminformatics, molecular dynamics, free energy perturbation, and AI/ML-driven drug design to support data-driven decision-making and the optimization of therapeutics across multiple modalities, including small molecules and biologics. Working within multidisciplinary teams of medicinal chemists, structural biologists, pharmacologists, data scientists, and ADME/Tox representatives, provides molecular-level insight and computational expertise to inform compound design, potency and selectivity optimization, and de-risk design hypotheses. Represents Computational Chemistry across Research and Development functions and seamlessly integrates internal and external technologies, collaborations, and resources to advance Neurocrine's drug discovery strategy. Supports senior leadership through long-term strategic planning, technology innovation, resource management, and the continuous evolution of computational capabilities to ensure effective achievement of scientific and operational objectives. Serves as a mentor and scientific leader, fostering the development of junior scientists and promoting excellence within the computational chemistry function.
Your Contributions (include, but are not limited to):
  • Develops, implements, and enforces scientifically sound computational chemistry strategies that support drug discovery programs from target validation through lead optimization and candidate selection
  • Leads the application of molecular modeling, structure-based drug design, ligand-based design, and AI/ML approaches to enable compound design and optimization
  • Partners closely with medicinal chemistry, structural biology, pharmacology, and data science teams to integrate computational insights into project strategies and decision-making
  • Evaluates, interprets, and communicates computational results, proactively providing strategic direction to project teams and senior management on compound design and program progression
  • Drives innovation through the evaluation and implementation of emerging computational technologies, including generative chemistry, predictive modeling, and large-scale data analysis
  • Establishes and oversees computational workflows, best practices, and reproducible methods to support high-quality and efficient research
  • Represents Computational Chemistry across R&D teams and contributes to program strategy, portfolio discussions, and governance forums
  • Provides strategic oversight for external collaborations, including academic partnerships, technology vendors, and contract research organizations (CROs)
  • Contributes to intellectual property strategy, scientific publications, and external presentations
  • Participates in selecting, developing, and evaluating personnel to ensure efficient operation and growth of the team
  • Maintains current knowledge of industry trends, emerging technologies, and scientific advancements in computational chemistry and drug discovery
  • Other tasks as assigned

Requirements:
  • Bachelors in chemistry or related field AND 12+ years of experience applying computational chemistry in a drug discovery setting OR
  • Masters in computational chemistry or related field AND 10+ years of experience applying computational chemistry in a drug discovery setting OR
  • PhD in computational chemistry, organic chemistry or a related field AND 8+ years of experience applying computational chemistry in a drug discovery setting
  • Proven leadership experience, including managing and developing scientific teams
  • Applies understanding of the team's place in the larger organization, and discusses changes, progress, and issues as they relate to other areas
  • Ability to meet multiple deadlines across a variety of projects/programs, with a high degree of accuracy and efficiency.
  • Deep expertise in molecular modeling, structure-based drug design, and cheminformatics methods
  • Demonstrated experience applying computational approaches to small molecules and/or emerging modalities
  • Experience integrating computational chemistry into multidisciplinary drug discovery teams
  • Strong track record of scientific achievement, including publications and/or patents
  • Experience with AI/ML approaches in drug discovery, including predictive modeling and generative design
  • Deep expertise in ligand and structure-based drug design related to small molecules as well as other modalities including: peptides, biologics and targeted protein degradation
  • Familiarity with CNS drug discovery or neuroscience-focused research
  • Experience working with cloud computing and high-performance computing environments including programming computational workflows in Knime or equivalent.
  • Expertise with industry-standard computational chemistry platforms (e.g., Schrödinger, OpenEye, MOE, or similar)
  • Demonstrated ability to influence strategy across multiple functions and organizational levels
  • Demonstrates strategy development and implementation within areas of responsibility
  • Possesses expert knowledge of own function and broad knowledge of multiple functions and impact on business
  • Proven leadership skills, including influencing across many levels of the organization
  • Maintains broad knowledge of scientific principles and theories and possesses intellectual mastery of multiple scientific areas

#LI-DM1
Neurocrine Biosciences is an EEO/Disability/Vets employer.
We are committed to building a workplace of belonging, respect, and empowerment, and we recognize there are a variety of ways to meet our requirements. We are looking for the best candidate for the job and encourage you to apply even if your experience or qualifications don't line up to exactly what we have outlined in the job description.
The annual base salary we reasonably expect to pay is $218,200.00-$298,000.00. Individual pay decisions depend on various factors, such as primary work location, complexity and responsibility of role, job duties/requirements, and relevant experience and skills. In addition, this position offers an annual bonus with a target of 35% of the earned base salary and eligibility to participate in our equity based long term incentive program. Benefits offered include a retirement savings plan (with company match), paid vacation, holiday and personal days, paid caregiver/parental and medical leave, and health benefits to include medical, prescription drug, dental and vision coverage in accordance with the terms and conditions of the applicable plans.