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Cerner Application Analyst Jobs in Indiana (NOW HIRING)

Hearst

Advanced Integrations Engineer

Indianapolis, IN

$99K - $133K/yr

... Cerner. This role owns end-to-end interface delivery and production reliability for HL7 v2 ... EHR application registration. The position partners with client IT teams, EHR analysts, and ...

Hearst

Advanced Integrations Engineer

Indianapolis, IN

$99K - $133K/yr

... Cerner. This role owns end-to-end interface delivery and production reliability for HL7 v2 ... EHR application registration. The position partners with client IT teams, EHR analysts, and ...

COMPASSUS

Business Office Coordinator

Evansville, IN · On-site

... Cerner. * Troubleshoots when users experience difficulty with the application. * Assists in ... Ability to read, analyze, and interpret general business periodicals, professional journals ...

All JobsCerner Application Analyst JobsCerner Application Analyst Jobs in Indiana

Cerner Application Analyst information

See Indiana salary details

$33.3K

$79.6K

$132.3K

How much do cerner application analyst jobs pay per year?

As of Aug 2, 2026, the average yearly pay for cerner application analyst in Indiana is $79,567.00, according to ZipRecruiter salary data. Most workers in this role earn between $61,400.00 and $89,400.00 per year, depending on experience, location, and employer.

What is a Cerner Application Analyst?

A Cerner Application Analyst is a healthcare IT professional responsible for implementing, configuring, maintaining, and supporting Cerner software systems within healthcare organizations. They collaborate with clinicians, administrators, and IT teams to ensure the Cerner electronic health record (EHR) system meets the organization's clinical and operational needs. Their duties often include troubleshooting issues, managing system updates, training end users, and optimizing workflows to improve efficiency and patient care. Cerner Application Analysts play a key role in translating clinical requirements into technical solutions and ensuring compliance with healthcare regulations.

What are some common challenges faced by Cerner Application Analysts when supporting end-users, and how can they be addressed?

Cerner Application Analysts often encounter challenges such as understanding diverse clinical workflows, managing system updates, and resolving user-reported issues efficiently. To address these, it's important to maintain strong communication with clinical staff, stay updated with Cerner system changes, and participate in ongoing training. Building collaborative relationships with both IT and clinical teams helps analysts anticipate needs and provide timely solutions, ensuring smoother adoption and optimal use of the Cerner platform.

What are the key skills and qualifications needed to thrive as a Cerner Application Analyst, and why are they important?

To thrive as a Cerner Application Analyst, you generally need a background in healthcare IT, experience with electronic health records (EHR), and a bachelor’s degree in a related field. Familiarity with Cerner Millennium applications, knowledge of HL7 interfaces, and certifications such as Cerner Certified Professional are highly valuable. Strong problem-solving abilities, attention to detail, and effective communication skills set top analysts apart in supporting end users and collaborating with clinical staff. These skills ensure the efficient implementation, optimization, and troubleshooting of Cerner systems, directly impacting patient care and operational excellence.

What is the difference between Cerner Application Analyst vs Epic Analyst?

AspectCerner Application AnalystEpic Analyst
CertificationsCerner certifications, healthcare IT credentialsEpic certifications, healthcare IT credentials
Work EnvironmentHospitals, healthcare systems using CernerHospitals, healthcare systems using Epic
Industry UsagePrimarily in healthcare facilities with Cerner systemsPrimarily in healthcare facilities with Epic systems
Job FocusImplementing, supporting Cerner applicationsImplementing, supporting Epic applications

The main difference between a Cerner Application Analyst and an Epic Analyst lies in the specific electronic health record (EHR) systems they support. Cerner Application Analysts focus on Cerner systems, while Epic Analysts specialize in Epic platforms. Both roles require healthcare IT certifications and involve supporting hospital workflows, but they are typically employed by different healthcare organizations based on their chosen EHR vendor.

What are popular job titles related to Cerner Application Analyst jobs in Indiana? For Cerner Application Analyst jobs in Indiana, the most frequently searched job titles are:
What job categories do people searching Cerner Application Analyst jobs in Indiana look for? The top searched job categories for Cerner Application Analyst jobs in Indiana are:
What cities in Indiana are hiring for Cerner Application Analyst jobs? Cities in Indiana with the most Cerner Application Analyst job openings:
Cerner Application Analyst jobs near you
Infographic showing various Cerner Application Analyst job openings in Indiana as of July 2026, with employment types broken down into 70% Full Time, 4% Part Time, and 26% Contract. Highlights an 61% Physical, 5% Hybrid, and 34% Remote job distribution, with an average salary of $79,567 per year, or $38.3 per hour.

DIRECTOR-APPLICATIONS IT

Methodist Hospitals

Merrillville, IN • On-site

Full-time

Posted 26 days ago

Job description

Overview
This position is a hybrid in the Chicagoland area.
The Director of IT Applications leads the strategy, implementation, and ongoing support of clinical and business application systems across our network of hospitals and clinics. The Director oversees Epic ambulatory and revenue cycle modules along with along with other revenue cycle and ancillary clinical and administrative applications. This person will manage a team of application analysts and will partner closely with finance, compliance, and operations to translate organizational needs into effective application solutions - all while maximizing the value of limited capital and operating resources.
Responsibilities
PRINCIPAL DUTIES AND RESPONSIBILITIES(*Essential Functions)
Application Strategy & Leadership
  1. Partner with the Director of Clinical Informatics to develop and execute a multi-year application roadmap aligned with the hospital system's clinical, financial, and operational priorities.
  2. Oversee the EHR platform and integrated modules, along with revenue cycle, ambulatory, and other clinical and business applications.
  3. Lead, mentor, and develop a team of application analysts.
  4. Serve as a key advisor to the CIO on application strategy, vendor selection, and IT governance.

Operations & Support
  1. Ensure high availability, performance, and security of mission-critical clinical and business applications.
  2. Establish and monitor service levels for application support, incident response, and change management.
  3. Oversee system upgrades, patches, integrations, and lifecycle planning across the application portfolio.

Stakeholder Collaboration
  1. Partner with clinical, financial, compliance, and operational leaders to translate business needs into application solutions.
  2. Build strong working relationships across departments.
  3. Represent IT Applications in cross-functional governance and project steering committees.

Fiscal & Vendor Management
  1. Manage vendor relationships, contracts, and licensing to control costs and maximize value from existing technology investments.
  2. Prioritize initiatives that improve operational efficiency, reimbursement capture, and total cost of ownership.
  3. Develop and manage the IT Applications operating and capital budget.

Compliance & Risk
  1. Ensure applications meet HIPAA, Meaningful Use / Promoting Interoperability, 340B (where applicable), and other regulatory requirements tied to safety net funding.
  2. Support audit readiness, data privacy, and security initiatives in partnership with Compliance and Information Security.

Performs other duties and responsibilities as assigned.
Qualifications
JOB SPECIFICATIONS(Minimum Requirements)
KNOWLEDGE, SKILLS, AND ABILITIES
  • Demonstrated experience managing an EHR platform and integrated clinical/business applications.
  • Strong understanding of healthcare regulatory requirements, including HIPAA and federal interoperability mandates.
  • Proven ability to manage vendor relationships, contracts, and budgets in a resource-constrained environment.
  • Excellent communication and relationship-building skills across clinical, financial, and operational stakeholders.
  • Familiarity with 340B program requirements and safety net-specific funding or reimbursement models (preferred).

EDUCATION
Bachelor's degree in Information Technology, Health Informatics, Business Administration, or a related field is Required.
Master's degree in Health Informatics, Business Administration, or related fieldis Preferred.
EXPERIENCE
8+ years of progressive IT experience in a healthcare or hospital setting, including 3+ years in a leadership role overseeing application teams is required.
Experience working within a safety net, public, or critical access hospital systemis preferred.
Experience with a major EHR platform (e.g., Epic, Oracle Health/Cerner, MEDITECH) is preferred.
CERTIFICATIONS AND LICENSURES
Relevant certifications (e.g., PMP, CPHIMS, CHCIO) is required.
EPIC Certification is preferred.
MODEL OF CARE AND CONDUCT
Methodist Hospitals strives for excellence and insists on high standards of conduct and performance in everything we do. Our Model of Care and Conduct is designed to create a positive work environment which Methodist desires for all employees. This is foundational to the high level of patient, family and physician satisfaction we strive for each day. As part of all position's duties at Methodist Hospitals, all employees are responsible to conduct themselves in accordance with the Model of Care and Conduct and will be evaluated according to these standards of behavior.#GoMethodist
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About Methodist Hospitals

Sourced by ZipRecruiter

Methodist Hospitals is a reputable institution in the healthcare and medical industry with its base in Gary, Indiana, United States. A trusted name in comprehensive medical services, the organization is primarily known for its robust offering in the fields of emergency and acute medical care, tracking back its foundational roots to the year 1923. Catholic nun Sister Gesuina set up the hospital with the sole mission of providing affordable healthcare services to the residents of Gary. Today, their mission stays true to promoting health, healing, and well-being in the communities they serve, encompassing a diverse representation of races, ethnicities, genders, ages, religions, abilities, and sexual orientations.

Industry

Health care and social assistance

Company size

1,001 - 5,000 Employees

Headquarters location

Gary, IN, US

Year founded

1923

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