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Biotech Software Engineer Jobs in Maryland (NOW HIRING)

Security Software Engineer

Hanover, MD · On-site

$120 - $160/hr

Category Software Engineer We are seeking a Security Software Engineer to build and harden software ... Biotechnology, and Health & Life Sciences. Why Join Us? Eccalon's Executives foster a supportive ...

Software Engineer III - Embedded Systems

Jessup, MD · On-site

$99K/yr

  • Medical

  • Dental

  • Vision

  • Life

  • Retirement

  • PTO

The Software Engineer should have sufficient proficiency and experience to serve as a go-to ... biotech, medical, or semiconductor instrumentation. Education: * Bachelor's degree (BS), Master ...

Software Engineer III - Embedded Systems

Jessup, MD · On-site

$99K/yr

  • Medical

  • Dental

  • Vision

  • Life

  • Retirement

  • PTO

... biotech, medical, or semiconductor instrumentation. Education: Bachelor's degree (BS), Master ... software engineering best practices including version control, documentation, and structured ...

Senior Software Developer

Bethesda, MD · On-site +1

$58.25 - $77/hr

  • Medical

  • Dental

  • Vision

  • Retirement

  • PTO

The National Center for Biotechnology Information (NCBI) is part of the National Library of ... The Senior Software Developer will work with the team to develop and maintain software supporting ...

Senior Software Developer

Bethesda, MD · On-site

$58.25 - $77/hr

  • Medical

  • Dental

  • Vision

  • Retirement

  • PTO

The National Center for Biotechnology Information (NCBI) is part of the National Library of ... The Senior Software Developer will work with the team to develop and maintain software supporting ...

Senior Software Developer (C++)

Bethesda, MD · On-site

$58.25 - $77/hr

  • Medical

  • Dental

  • Vision

  • Retirement

  • PTO

NCBI, the National Center for Biotechnology Information, the nation's premier biomedical resource, is seeking a software developer to help deliver biological sequence annotation and data curation ...

Senior Software Developer (C++)

Bethesda, MD · On-site +1

$58.25 - $77/hr

  • Medical

  • Dental

  • Vision

  • Retirement

  • PTO

NCBI, the National Center for Biotechnology Information, the nation's premier biomedical resource, is seeking a software developer to help deliver biological sequence annotation and data curation ...

About Automation Engineering Roles at Danaher Are you energized by solving technical problems ... biotechnology. Our global teams work every day to solve the world's most complex challenges by ...

About Automation Engineering Roles at Danaher Are you energized by solving technical problems ... biotechnology. Our global teams work every day to solve the world's most complex challenges by ...

About Automation Engineering Roles at Danaher Are you energized by solving technical problems ... biotechnology. Our global teams work every day to solve the world's most complex challenges by ...

About Automation Engineering Roles at Danaher Are you energized by solving technical problems ... biotechnology. Our global teams work every day to solve the world's most complex challenges by ...

About Automation Engineering Roles at Danaher Are you energized by solving technical problems ... biotechnology. Our global teams work every day to solve the world's most complex challenges by ...

About Automation Engineering Roles at Danaher Are you energized by solving technical problems ... biotechnology. Our global teams work every day to solve the world's most complex challenges by ...

About Automation Engineering Roles at Danaher Are you energized by solving technical problems ... biotechnology. Our global teams work every day to solve the world's most complex challenges by ...

Showing results 21-40

Biotech Software Engineer information

See Maryland salary details

$61.6K

$143.2K

$199.4K

How much do biotech software engineer jobs pay per year?

As of Aug 20, 2026, the average yearly pay for biotech software engineer in Maryland is $143,178.00, according to ZipRecruiter salary data. Most workers in this role earn between $116,500.00 and $167,900.00 per year, depending on experience, location, and employer.

What is a biotech software engineer?

A Biotech Software Engineer develops software solutions for the biotechnology industry, enabling research, data analysis, and automation in fields like genomics, bioinformatics, and drug discovery. They work with scientists to design algorithms, manage biological data, and create applications that support experiments and workflows. This role requires expertise in programming, cloud computing, and biological sciences to bridge the gap between technology and life sciences.

What does a biotech software engineer do?

As a Biotech Software Engineer, you'll often develop and maintain software tools for analyzing biological data, automate laboratory workflows, or create user-friendly interfaces for scientific researchers. Your daily tasks might include writing code, troubleshooting algorithms, reviewing scientific data, and collaborating closely with biologists, data scientists, and laboratory technicians. Depending on the company, you may be involved in developing cloud-based platforms, integrating new laboratory hardware, or ensuring software compliance with industry regulations. This dynamic and collaborative environment means your work directly impacts ongoing research and helps accelerate scientific discoveries in the biotech sector.

What are the key skills and qualifications needed to thrive as a biotech software engineer?

To thrive as a Biotech Software Engineer, you need a solid background in computer science or software engineering, coupled with an understanding of biology, genetics, or related life sciences. Familiarity with programming languages such as Python or Java, experience using bioinformatics tools (like BLAST or Bioconductor), and, in some settings, knowledge of regulatory standards are highly valuable. Strong problem-solving abilities, effective communication, and the ability to work well in interdisciplinary teams distinguish top performers in this field. These skills are crucial for building reliable software solutions that support scientific discovery and innovation in biotechnology organizations.

What are the most commonly searched types of Biotech Software Engineer jobs in Maryland?

The most popular types of Biotech Software Engineer jobs in Maryland are:

What are popular job titles related to Biotech Software Engineer jobs in Maryland?

For Biotech Software Engineer jobs in Maryland, the most frequently searched job titles are:

What job categories do people searching Biotech Software Engineer jobs in Maryland look for?

The top searched job categories for Biotech Software Engineer jobs in Maryland are:

What cities in Maryland are hiring for Biotech Software Engineer jobs?

Cities in Maryland with the most Biotech Software Engineer job openings:

Infographic showing various Biotech Software Engineer job openings in Maryland as of August 2026, with employment types broken down into 89% Full Time, and 11% Contract. Highlights an 100% In-person job distribution, with an average salary of $143,178 per year, or $68.8 per hour.

Security Software Engineer

Eccalon LLC

Hanover, MD • On-site

$120 - $160/hr

Other

Re-posted 24 days ago


Job description

EOE Statement Eccalon provides equal employment opportunities to all employees and applicants for employment and prohibits discrimination and harassment of any type without regard to race, color, religion, age, sex, national origin, disability status, genetics, protected veteran status, sexual orientation, gender identity or expression, or any other characteristic protected by federal, state or local laws.

This policy applies to all terms and conditions of employment, including recruiting, hiring, placement, promotion, termination, layoff, recall, transfer, leaves of absence, compensation and training.

EEO is the law.

Category Software Engineer

Job Description

We are seeking a Security Software Engineer to build and harden software systems supporting DoD programs operating under CMMC/NIST 800-171/FedRAMP compliance requirements. You will embed security across the SDLC—from design and code review through CI/CD and cloud deployment—working alongside engineering, DevSecOps, and IT teams in a regulated, cloud-native environment (AWS Commercial and GovCloud, Azure GCC High).

Responsibilities
  • Core Engineering & Secure Development
    • Design and develop secure software with a security-first mindset baked into every phase of the SDLC.
    • Apply secure coding standards, threat modeling, and vulnerability mitigation aligned to NIST 800-53 and CMMC Level 2/3 controls.
    • Conduct architecture reviews and code hardening to address OWASP Top 10 and DoD STIGs.
    • Automate security gates in CI/CD pipelines (SAST, DAST, dependency scanning, secrets detection).
  • Security Architecture & Controls
    • Design secure system and API architectures for multi-tenant cloud environments, including GCC High and FedRAMP-authorized platforms.
    • Implement IAM controls, JIT provisioning, SSO/SAML/OIDC flows, and least-privilege authorization frameworks (e.g., Cognito, Azure AD).
    • Instrument applications with security logging and monitoring that satisfies audit and continuous monitoring requirements (AU/SI control families).
  • Vulnerability Management & Response
    • Lead code reviews, SAST/DAST scans, and targeted penetration testing; document findings against control frameworks.
    • Triage and remediate vulnerabilities within POA&M timelines; maintain artifact evidence for compliance assessments.
    • Support incident response for application-layer events; contribute to after-action reports and corrective action plans.
  • Cross-functional Collaboration
    • Serve as the embedded security champion for engineering squads, raising the security bar through mentorship and code review culture.
    • Develop and deliver security training and runbooks tailored to engineering and DevOps team members.
    • Collaborate with DevOps/SRE to enforce secure IaC, WAF rules, network controls, and runtime monitoring across AWS and Azure environments.
Required Qualifications
  • Bachelor’s degree in Computer Science, Engineering, or related field—or equivalent experience.
  • 3+ years of software engineering experience with a strong focus on security.
  • Proficiency in one or more programming languages (e.g., JavaScript/TypeScript, Python, Go, C#).
  • Experience with secure coding practices and frameworks.
  • Strong understanding of application security principles, including:
    • OWASP Top 10
    • Secure API/REST design
    • Cryptography fundamentals
    • Authentication/authorization patterns
  • Experience with code scanning tools (SAST/DAST), threat modeling, and penetration testing.
  • Familiarity with NIST 800-171, CMMC, or FedRAMP security control requirements and evidence collection.
  • Hands-on experience with AWS and/or Azure security services (IAM, WAF, Security Hub, Defender, Sentinel); GCC High or GovCloud experience a plus.
Preferred Qualifications
  • Experience with container security (Docker, ECS).
  • Working knowledge of Zero Trust Architecture principles.
  • Experience building DevSecOps pipelines in regulated environments; familiarity with tools like Prisma, Checkov, Snyk, or Aqua.
  • Relevant certifications (any of the following):
    • CISSP, CSSLP, or CASP+
    • OSCP
    • CEH
    • GIAC (GWAPT, GSEC, GWEB) or CCP/CCA (UK Cyber Essentials equivalent)
  • Experience securing microservices or event-driven architectures on ECS; background in federal or cleared environments preferred.

Full-Time/Part-Time Full-Time

Exempt/Non-Exempt Exempt

About the Organization

Eccalon provides global solutions to the most challenging technological issues of the 21st-century, and our evolving portfolio spans five major markets: Machine Learning, Cybersecurity, Aerospace & Defense, Material Sciences, Advance Manufacturing, Sports Science, Biotechnology, and Health & Life Sciences.

Why Join Us?

Eccalon's Executives foster a supportive work environment allowing our teams to thrive, and have a fierce dedication to innovation, security, and people. Our culture is built on inclusion, teamwork, trust, and we are committed to offering career advancement opportunities to all employees. Encouraging a healthy and balanced life, we offer an extensive benefits package to support the wellness of our employees and their families. You will be joining a team of innovators, working with cutting edge technologies, supporting mission critical projects, and making an impact.

This position is currently accepting applications.

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Eccalon logo

About Eccalon

Sourced by ZipRecruiter

We are a cross-functional collective of innovative minds that leverages technology to tackle the most challenging problems of this generation for clients, the nation, and the world. Eccalon fosters creativity, curiosity, and imagination across all departments and divisions to pioneer new ideas, products, and services. We advance innovation.​

Industry

Guided missile and space vehicle manufacturing

Company size

11 - 50 Employees

Headquarters location

Hanover, MD, US

Year founded

2017