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Biotech Engineer Jobs in Boston, MA (NOW HIRING)

About the Team STR is seeking a Biotechnology Principal Investigator (PI) to develop cutting-edge ... Engineering, or related field * Experience leading technical teams on advanced R&D programs (e.g ...

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Biotech Engineer information

See Boston, MA salary details

$39.7K

$116.5K

$149.4K

How much do biotech engineer jobs pay per year?

As of Aug 11, 2026, the average yearly pay for biotech engineer in Boston, MA is $116,545.00, according to ZipRecruiter salary data. Most workers in this role earn between $96,100.00 and $147,700.00 per year, depending on experience, location, and employer.

What are some common challenges faced by biotech engineers when working on cross-disciplinary projects?

Biotech Engineers frequently collaborate with professionals from fields like biology, chemistry, and software engineering, which can present challenges in communication and aligning project goals. Understanding the specialized terminology and priorities of each discipline is essential to ensure smooth teamwork and project success. Additionally, integrating new biotechnologies with existing systems often requires adaptability and creative problem-solving. Being open to learning from colleagues and actively seeking clarification can help overcome these challenges and lead to innovative solutions.

Do biotech engineers make a lot of money?

Biotech engineers typically earn competitive salaries that vary based on experience, education, and location. Entry-level positions often start around $60,000 to $80,000 annually, with experienced professionals earning over $100,000. Advanced skills in molecular biology, process engineering, and certifications can increase earning potential.

What is a biotech engineer?

Biotech Engineers are professionals who apply principles of biology, chemistry, and engineering to develop products and technologies that improve healthcare, agriculture, and the environment. They work on designing and optimizing processes for manufacturing pharmaceuticals, developing biofuels, engineering genetically modified organisms, and creating medical devices. Their work often involves research, laboratory experiments, and collaboration with other scientists and engineers to solve complex biological problems. Biotech Engineers play a key role in advancing innovations that benefit society and improve quality of life.

What are the key skills and qualifications needed to thrive as a biotech engineer?

To thrive as a Biotech Engineer, you need a solid background in biology, chemistry, and engineering principles, typically supported by a degree in biotechnology, biomedical engineering, or a related field. Familiarity with laboratory instrumentation, molecular biology techniques, and data analysis software such as MATLAB or Python is essential. Strong problem-solving skills, teamwork, and effective communication set top performers apart in this interdisciplinary role. These competencies ensure successful research, product development, and innovation in the rapidly evolving biotech sector.

What is the difference between Biotech Engineer vs Biomedical Engineer?

AspectBiotech EngineerBiomedical Engineer
Required CredentialsBachelor's or Master's in Biotechnology, Bioengineering, or related fieldsBachelor's or Master's in Biomedical Engineering, Bioengineering, or related fields
Work EnvironmentBiotech companies, research labs, pharmaceutical firmsHospitals, medical device companies, research labs
Industry UsageDevelops biotech products, genetic engineering, bioprocessingDesigns medical devices, prosthetics, healthcare technology

Biotech Engineers focus on developing biotech products and processes, often working in research and manufacturing settings. Biomedical Engineers primarily design and improve medical devices and healthcare solutions. While both roles require similar educational backgrounds, their work environments and industry applications differ, catering to distinct aspects of healthcare and biotechnology.

What are popular job titles related to Biotech Engineer jobs in Boston, MA? For Biotech Engineer jobs in Boston, MA, the most frequently searched job titles are:
What job categories do people searching Biotech Engineer jobs in Boston, MA look for? The top searched job categories for Biotech Engineer jobs in Boston, MA are:
What cities near Boston, MA are hiring for Biotech Engineer jobs? Cities near Boston, MA with the most Biotech Engineer job openings:
Infographic showing various Biotech Engineer job openings in Boston, MA as of August 2026, with employment types broken down into 89% Full Time, 5% Part Time, and 6% Contract. Highlights an 87% Physical, 5% Hybrid, and 8% Remote job distribution, with an average salary of $116,545 per year, or $56 per hour.

Full-time

Re-posted 22 days ago


Flagship Facility Services rating

7.9

Company rating: 7.9 out of 10

Based on 6 frontline employees who took The Breakroom Quiz

60th of 251 rated facilities management


Job description

It's fun to work in a company where people truly BELIEVE in what they're doing!

We're committed to bringing passion and customer focus to the business.

130,000 per year


Job SummaryPerforms complex analytical work in providing office and engineering support and field engineering support in a Biotech/Biopharma environment ensuring technical competence and compliance with all current codes and criteria.Job Description

Essential Functions

  • Supervise the performance and maintenance of all mechanical, electrical and craft services, ensuring operation within design capabilities and achieving proper environmental conditions prescribed by Building Management.
  • Oversee and supervise the efficient operation of the facility equipment and systems.
  • Perform requisite daily communication with Building Management on matters relating to the services performed.
  • Develop operating instructions and procedures for equipment and systems. Strive toward a goal of zero down-time in operations by virtue of reliable system performance.
  • Together with the DENS Account Director, implement and conduct training programs for operating the facility equipment and systems.
  • Establish and maintain periodic operational testing schedules for critical systems and equipment.
  • Administer an effective and accountable preventative maintenance system tailored to the facility.
  • Evaluate all equipment and systems operationally and provide the customer with a list of deficiency items and recommendations for improvement.
  • Monitor and supervise subcontracted jobs to outside concerns when it is not practical for them to be performed in-house, or as may be requested by Building Management.
  • Possess the requisite licenses and permits required by local laws and ordinances to operate, repair and maintain the facility equipment and systems. Ensure that the on-site staff conforms to all local laws, codes, and regulations. In conjunction with Building Management, establish a program for the acquisition, storage and accountability of all operating materials, tools and equipment.
  • Establish a customer approved inventory control system.
  • Support and maintain a work order system for the control and assignment of all on-call and unscheduled services requested by the customer.
  • This system is to include the work performed, where applied, personnel assignments, time and material estimates, and authorization.
  • If applicable ensure that work responsibilities are allocated properly among subordinates by developing and implementing manpower schedules and work methods and procedures that are designed to obtain low cost and efficient operation.
  • Establish performance standards for each phase of work, adhering to standard practices and quality levels.
  • Carry out policies and procedures of the customer and Flagship Facility Services, Inc. concerning safety, administrative requirements, standards, practices and work methods.
  • Perform any additional duties on an as required basis where such duties are within the scope of contractual limitations.
  • Minimum of five (4) years' experience in the implementation of the above.

Knowledge and Skills

  • Previous experience managing vendors.
  • Knowledge of biotech infrastructure and systems.
  • Knowledge of equipment, controls, and building automation maintenance. Technical disciplines in Plant Operations, HVAC, Electrical, Plumbing.
  • Ability to read and interpret blue prints, schematic drawings and technical manuals.
  • Ability to manage operating budgets and capital plans.
  • Proficient verbal and written communication skills.
  • EPA (CFC) 608 Certificate preferred.
  • Must be able to demonstrate knowledge and show evidence of experience in operations, maintenance and repair of equipment in a biotech environment.
  • Be proficient in computer, electronic and automated functions.
  • Thorough knowledge of civil engineering principles, practices and methods. Management and leadership skills.
  • Technical Capacity.
  • Performance Management Business Acumen.
  • Communication Proficiency.
  • Ethical Conduct.
  • Problem Solving/Analysis.

Education and Work Experience

  • Graduation from an accredited four-year college or university or equivalent preferred.
  • A minimum of four years previous professional experience or any equivalent combination of education and experience
  • Background in the Life Sciences, Biotech and BioPharma industry


Work Environment

  • Fast paced Biotech/Biopharma environment
  • High sense of urgency
  • The noise level in the work environment is usually moderate
  • Exposed to a combination of normal office type environments and Laboratory environments
  • Exposed to highly confidential information

Physical Demands

  • The physical demands described here are representative of those that must be met by an employee to successfully perform the essential functions of this job.
  • While performing the duties of this job, the employee is regularly required to stand, walk, sit, use hands to finger, handle, or feel objects, tools or controls, reach with hands and arms, climb stairs, balance, stoop, kneel, crouch or crawl, talk or hear. Ability to stand, walk, and sit for long periods of time.
  • The employee may regularly lift and/or move a minimum of 50 pounds of office or facilities equipment (pumps, tools, ladders) and ability to safely install rigging/lifting devices.
  • Specific vision abilities required by this job include close vision, distance vision, color vision, peripheral vision, depth perception, and the ability to adjust focus.
  • Under The Americans with Disabilities Act reasonable accommodations may be made to enable individuals with disabilities to perform the essential functions.

Other Duties

  • Please note this job description is not designed to cover or contain a comprehensive listing of activities, duties or responsibilities that are required of the employee for this job.
  • Duties, responsibilities and activities may change at any time with or without notice.

Work Authorization/Security Clearance

Authorized to work in the U.S.

Equal Employment Opportunity Employer

FlagShip is an equal opportunity employer. All aspects of employment including the decision to hire, promote, discipline, or discharge, will be based on merit, competence, performance, and business needs. We do not discriminate on the basis of race, color, religion, marital status, age, national origin, ancestry, physical or mental disability, medical condition, pregnancy, genetic information, gender, sexual orientation, gender identity or expression, veteran status, or any other status protected under federal, state, or local law.

Other Duties

Please note this job description is not designed to cover or contain a comprehensive listing of activities, duties, or responsibilities that are required of the employee for this job. Duties, responsibilities, and activities may change at any time with or without notice.

Work Authorization

Authorized to work in the U.S.

Equal Employment Opportunity Employer

Flagship is an equal opportunity employer. All aspects of employment including the decision to hire, promote, discipline, or discharge, will be based on merit, competence, performance, and business needs. We do not discriminate on the basis of race, color, religion, marital status, age, national origin, ancestry, physical or mental disability, medical condition, pregnancy, genetic information, gender, sexual orientation, gender identity or expression, veteran status, or any other status protected under federal, state, or local law.

We also consider qualified applicants with criminal histories, consistent with applicable federal, state and local law.

Americans with Disabilities Act

Under the Americans with Disabilities Act, reasonable accommodations may be made to enable individuals with disabilities to perform the essential functions of their job.

If you like wild growth and working with happy, enthusiastic over-achievers, you'll enjoy your career with us!


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