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Biomedical Software Engineer Jobs in California (NOW HIRING)

Sr. Systems Engineer

San Diego, CA · On-site

$110K - $151K/yr

Bachelor's degree in engineering (Mechanical, Electrical, Biomedical, Software, or related field) * 5+ years of experience in complex system development (medical devices, intraoperative ...

Staff Software Engineer Embedded UI

Sunnyvale, CA · On-site

$154K - $203K/yr

As a Staff Software Engineer Embedded UI on the Future Forward team, you will develop innovative ... Bachelor's degree in Computer Science, Electrical Engineering, Biomedical Engineering, or a related ...

Staff Software Engineer Embedded UI

Sunnyvale, CA · On-site

$154K - $203K/yr

As a Staff Software Engineer Embedded UI on the Future Forward team, you will develop innovative ... Bachelor's degree in Computer Science, Electrical Engineering, Biomedical Engineering, or a related ...

Sr. Systems Engineer

San Diego, CA

$110K - $151K/yr

Bachelor's degree in engineering (Mechanical, Electrical, Biomedical, Software, or related field) * 5+ years of experience in complex system development (medical devices, intraoperative ...

Required : • Bachelor's degree in Computer Science, Software Engineering, Electrical Engineering, Biomedical Engineering, or related technical discipline. • Minimum 3 years of experience in ...

Showing results 41-60

Biomedical Software Engineer information

See California salary details

$62.7K

$145.6K

$202.8K

How much do biomedical software engineer jobs pay per year?

As of Aug 15, 2026, the average yearly pay for biomedical software engineer in California is $145,592.00, according to ZipRecruiter salary data. Most workers in this role earn between $118,400.00 and $170,700.00 per year, depending on experience, location, and employer.

What does a biomedical software engineer do?

Biomedical Software Engineers often work on designing, developing, and maintaining software used in medical devices, clinical diagnostics, or healthcare information systems. Typical responsibilities include coding new features, troubleshooting and resolving software issues, ensuring compliance with medical standards, and participating in quality assurance testing. You may also collaborate closely with clinicians, researchers, and regulatory specialists to align technological solutions with user needs and safety requirements. These projects frequently involve iterative development and rigorous validation to ensure reliability in real-world medical settings.

What is a biomedical software engineer?

A Biomedical Software Engineer develops software solutions for medical and healthcare applications, including medical devices, diagnostic tools, and research simulations. They combine biomedical knowledge with software development skills to create and maintain systems that improve patient care, enhance medical research, and ensure regulatory compliance. Their work often involves programming, data analysis, and collaboration with healthcare professionals and researchers.

What skills and qualifications are needed to be a biomedical software engineer?

To thrive as a Biomedical Software Engineer, you need a strong background in computer science, biomedical engineering, and software development—often supported by a bachelor's or master's degree in a related field. Proficiency with programming languages such as Python, C++, or Java, familiarity with medical imaging tools, and experience working with healthcare interoperability standards like HL7 or DICOM are typically required. Effective communication, teamwork, and problem-solving skills are crucial for collaborating with cross-functional teams and understanding user requirements. These competencies ensure that biomedical software solutions are safe, compliant, and meet the complex needs of healthcare environments.

What cities in California are hiring for Biomedical Software Engineer jobs?

Cities in California with the most Biomedical Software Engineer job openings:

Infographic showing various Biomedical Software Engineer job openings in California as of August 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $145,592 per year, or $70 per hour.

Principal Bioinformatics Software Engineer

Roche

Santa Clara, CA • On-site, Remote

$165K - $308K/yr

Full-time

Re-posted 7 days ago


Roche rating

9.3

Company rating: 9.3 out of 10

Based on 23 frontline employees who took The Breakroom Quiz

3rd of 86 rated pharmaceutical


Job description

At Roche you can show up as yourself, embraced for the unique qualities you bring. Our culture encourages personal expression, open dialogue, and genuine connections, where you are valued, accepted and respected for who you are, allowing you to thrive both personally and professionally. This is how we aim to prevent, stop and cure diseases and ensure everyone has access to healthcare today and for generations to come. Join Roche, where every voice matters.

The Position

Roche Sequencing is not only changing science, but we are changing lives. Our software teams are laying the groundwork for the future by developing powerful bioinformatics algorithms, data analysis tools, and software/systems infrastructures so researchers and clinicians can make better health decisions faster. The path to curing cancer lies in ones and zeros as we work with next-generation genomic sequencing, a new frontier.

Do you want to develop software products that scientists and others in the life sciences will use to diagnose, find treatments, and eventually beat diseases like cancer? Our team builds highly scalable, reliable software and secure systems for better diagnostics. Come join us!

The Opportunity

  • As a Bioinformatics Software Engineer, you will design and develop automated verification tests for the bioinformatics components and pipelines that are used in Roche Sequencing products. You will be part of the team developing cutting-edge, distributed, scale-out Next-Generation Sequencing data analysis software to ensure the highest possible software quality for gene sequencing research and disease diagnostics.

  • Work closely with research and algorithm experts, accelerating bioinformatics techniques using GPU hardware. Support software development lifecycle and Design Control process, working closely with team members to continuously improve quality and feature sets of the software products, based on technical design and requirements specificationsWork closely with team members to continuously improve the quality and feature sets of software products. This includes supporting the software development lifecycle and Design Control process, based on technical design and requirements specifications.

Who You Are

  • B.S. or M.S. or PhD in Computational Biology or Bioinformatics or Biomedical engineering or related field.

  • 5+ years of experience in working with NGS data and bioinformatics pipeline verification.

  • Strong expertise in Python, including numerical computing and data science libraries.

  • Proficiency in AWS and Linux Shell environments

  • Experience designing, documenting and executing verification tests.

  • Be self-driven, detail oriented, analytical and proven ability to learn quickly.

  • Be a team player, customer focused with excellent interdisciplinary collaboration skills.

Preferred Qualifications

  • Proven expertise in Object-Oriented Programming (OOP) using C++, and practical experience utilizing GPU-accelerated C/C++ libraries.

  • Experience with CI/CD tools and concepts.

  • Software verification experience focusing on medical device software or regulated applications.

Relocation benefits are not available for this posting

The expected salary range for this position based on the primary location of California is $165,800 - $308,000 annual. Actual pay will be determined based on experience, qualifications, geographic location, and other job-related factors permitted by law. A discretionary annual bonus may be available based on individual and Company performance. This position also qualifies for the benefits detailed at the link provided below.

Benefits

Who we are

A healthier future drives us to innovate. Together, more than 100'000 employees across the globe are dedicated to advance science, ensuring everyone has access to healthcare today and for generations to come. Our efforts result in more than 26 million people treated with our medicines and over 30 billion tests conducted using our Diagnostics products. We empower each other to explore new possibilities, foster creativity, and keep our ambitions high, so we can deliver life-changing healthcare solutions that make a global impact.


Let's build a healthier future, together.

Roche is an equal opportunity employer. It is our policy and practice to employ, promote, and otherwise treat any and all employees and applicants on the basis of merit, qualifications, and competence. The company's policy prohibits unlawful discrimination, including but not limited to, discrimination on the basis of Protected Veteran status, individuals with disabilities status, and consistent with all federal, state, or local laws.

If you have a disability and need an accommodation in relation to the online application process, please contact us by completing this form Accommodations for Applicants.


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