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Bioinformatics Software Engineer Jobs in New York

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Bioinformatics Software Engineer information

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$47K

$143.4K

$260.9K

How much do bioinformatics software engineer jobs pay per year?

As of Aug 9, 2026, the average yearly pay for bioinformatics software engineer in New York is $143,376.00, according to ZipRecruiter salary data. Most workers in this role earn between $105,000.00 and $171,800.00 per year, depending on experience, location, and employer.

What is a bioinformatics software engineer?

A Bioinformatics Software Engineer develops and maintains software tools, algorithms, and databases for analyzing biological data, such as genomic sequences and protein structures. They work at the intersection of computer science and biology, using programming languages like Python, Java, or R to process and interpret large-scale biological datasets. Their role is crucial in fields like genomics, drug discovery, and personalized medicine, where computational solutions help researchers derive meaningful insights from complex biological information.

What are the typical daily responsibilities of a bioinformatics software engineer?

As a Bioinformatics Software Engineer, your day-to-day responsibilities typically include designing, developing, and maintaining software tools or pipelines for analyzing biological data such as DNA, RNA, or protein sequences. You may collaborate closely with researchers and scientists to understand biological problems and translate them into computational solutions, reviewing and optimizing code for efficiency and scalability. Troubleshooting data processing issues, integrating new algorithms, and contributing to documentation are also common tasks. Additionally, you might participate in cross-functional meetings and keep up with emerging technologies and trends in the field.

What are the key skills and qualifications needed to thrive in the bioinformatics software engineer position, and why are they important?

To thrive as a Bioinformatics Software Engineer, you need a strong background in software development (especially with Python, R, or C++), algorithm design, and biological data analysis, usually supported by a degree in bioinformatics, computer science, or a related field. Familiarity with bioinformatics tools, databases (like NCBI or Ensembl), version control systems (such as Git), and experience with cloud computing or high-performance computing environments is highly valued. Strong problem-solving skills, attention to detail, and the ability to collaborate effectively with biologists and data scientists set candidates apart. These competencies are crucial for efficiently developing reliable software solutions that support complex biological research and data-driven discoveries.

What are the most commonly searched types of Bioinformatics Software Engineer jobs in New York? The most popular types of Bioinformatics Software Engineer jobs in New York are:
What are popular job titles related to Bioinformatics Software Engineer jobs in New York? For Bioinformatics Software Engineer jobs in New York, the most frequently searched job titles are:
What cities in New York are hiring for Bioinformatics Software Engineer jobs? Cities in New York with the most Bioinformatics Software Engineer job openings:
What are popular job titles related to Bioinformatics Software Engineer jobs in NY? For Bioinformatics Software Engineer jobs in NY, the most frequently searched job titles are:
Infographic showing various Bioinformatics Software Engineer job openings in New York as of August 2026, with employment types broken down into 88% Full Time, 8% Part Time, and 4% Contract. Highlights an 88% Physical, 3% Hybrid, and 9% Remote job distribution, with an average salary of $143,376 per year, or $68.9 per hour.

Software Development Engineer II (ADBL178)

Amazon

Newark, NJ • On-site

$158K - $213K/yr

Full-time

Posted 9 days ago


Amazon rating

7.4

Company rating: 7.4 out of 10

Based on 7,069 frontline employees who took The Breakroom Quiz

6th of 39 rated national retailers


Job description

Employer: Audible, Inc.
Title: Software Development Engineer II
Location: 1 Washington Park, Newark, NJ 07102
Duties: Participate in the design, development, implementation, testing and documentation of embedded or distributed software applications, tools, systems, and services using Java, Python, C#, or C++, and Object-Oriented Design. Translate functional requirements into robust, efficient, supportable solutions that work well within the overall system architecture. Participate in the full development cycle, end-to-end, from design, implementation, and testing to documentation, delivery, and maintenance. Produce comprehensive, usable software documentation. Evaluate and make decisions around the use of new or existing software products and tools. Mentor junior development engineers. Position reports into Newark, NJ office; however, telecommuting may also be allowed.
Requirements: Requires a Bachelor's degree in Computer Science, Engineering, Mathematics, Biotechnology, Bioinformatics, or a related field, plus two (2) years of experience as a Software Development Engineer or a related occupation involving software development.
Experience may be gained concurrently and must include two (2) years in each of the following:
- Designing and developing large-scale, multi-tiered, embedded, or distributed software applications, tools, systems, or services using Java, Python, C#, C++, or Object-Oriented Design
- Utilizing knowledge of data structures, algorithms, or object-oriented design principles to optimize code performance and efficiency
- Working with version control systems such as Git or similar
- Working with web technologies (HTML, CSS, or JavaScript) or web services (RESTful APIs)
- Using software testing techniques (unit testing, integration testing, or automated testing) to ensure high-quality, maintainable code
- Conducting performance analysis and optimization of applications, focusing on reducing latency, improving throughput, and enhancing resource utilization
- Integrating security best practices into the development lifecycle, including encryption at-rest and in-transit, role-based access control, or secure API authentication mechanisms
- Working with relational databases including MySQL, PostgreSQL, or Oracle
Salary: $158,100 - $213,800 /year. Dependent on the position offered, equity, sign-on payments, and other forms of compensation may be provided as part of a total compensation package, in addition to a full range of medical, financial, and/or other benefits. For more information, please visit https://www.aboutamazon.com/workplace/employee-benefits. Multiple positions. Apply online: www.amazon.jobs - search by job code: ADBL178.
#0000
BASIC QUALIFICATIONS
Requires a Bachelor's degree in Computer Science, Engineering, Mathematics, Biotechnology, Bioinformatics, or a related field, plus two (2) years of experience as a Software Development Engineer or a related occupation involving software development.
Experience may be gained concurrently and must include two (2) years in each of the following:
- Designing and developing large-scale, multi-tiered, embedded, or distributed software applications, tools, systems, or services using Java, Python, C#, C++, or Object-Oriented Design
- Utilizing knowledge of data structures, algorithms, or object-oriented design principles to optimize code performance and efficiency
- Working with version control systems such as Git or similar
- Working with web technologies (HTML, CSS, or JavaScript) or web services (RESTful APIs)
- Using software testing techniques (unit testing, integration testing, or automated testing) to ensure high-quality, maintainable code
- Conducting performance analysis and optimization of applications, focusing on reducing latency, improving throughput, and enhancing resource utilization
- Integrating security best practices into the development lifecycle, including encryption at-rest and in-transit, role-based access control, or secure API authentication mechanisms
- Working with relational databases including MySQL, PostgreSQL, or Oracle.
#0000
PREFERRED QUALIFICATIONS
Please see job description and the position requirements above.
Amazon is an equal opportunity employer and does not discriminate on the basis of protected veteran status, disability, or other legally protected status.
Our inclusive culture empowers Amazonians to deliver the best results for our customers. If you have a disability and need a workplace accommodation or adjustment during the application and hiring process, including support for the interview or onboarding process, please visit https://amazon.jobs/content/en/how-we-hire/accommodations for more information. If the country/region you're applying in isn't listed, please contact your Recruiting Partner.

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About Amazon

Sourced by ZipRecruiter

Amazon.com, Inc., commonly known as Amazon, is an American multinational technology company. It was founded by Jeff Bezos in 1994 and initially started as an online marketplace for books. Since then, Amazon has expanded its operations and become one of the largest e-commerce companies in the world. Amazon's primary business is its online retail platform, where customers can purchase a vast array of products, including electronics, clothing, books, home goods, and much more. The company offers a convenient and user-friendly shopping experience, with features such as fast shipping, customer reviews, and personalized recommendations. In addition to its e-commerce platform, Amazon has diversified its business into various other areas. One of its notable ventures is Amazon Web Services (AWS), a comprehensive cloud computing platform that provides services such as storage, compute power, and database management to individuals and businesses. AWS has become a leader in the cloud computing industry, powering many websites and applications worldwide. Amazon has also developed its own consumer electronics, including the popular Amazon Kindle e-reader, Fire tablets, Fire TV streaming devices, and the Alexa-powered Echo smart speakers. The Alexa voice assistant, integrated into these devices, allows users to interact with their devices using voice commands, perform tasks, and access information. Furthermore, Amazon has expanded into media and entertainment. It operates Prime Video, a streaming service that offers a wide range of movies, TV shows, and original content. Amazon Music provides a platform for streaming and purchasing digital music, while Audible offers audiobooks and other audio content. The company's commitment to customer satisfaction and convenience is demonstrated by its membership program, Amazon Prime. Prime members receive various benefits, including free two-day shipping, access to streaming services, exclusive deals, and more.

Industry

It services, book publishers, retail, real estate and computer and electronic product manufacturing

Company size

10,000+ Employees

Headquarters location

Seattle, WA, US