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Automation Engineering Manager Jobs in California

Automation Engineer

Oceanside, CA · On-site

$130K - $150K/yr

... manage projects from concept through implementation and stabilization. Working closely with manufacturing, quality, engineering, and external automation partners, this engineer will identify ...

New

The Reliability & Maintenance Engineering (RME) team are the business partners that work tirelessly ... change management, project management, training, security, infrastructure and systems ...

... automation, and data systems, while supporting operational excellence and strategic growth ... The Engineering Manager will plan, execute, and deliver engineering projects across their full ...

... automation, and data systems, while supporting operational excellence and strategic growth ... The Engineering Manager will plan, execute, and deliver engineering projects across their full ...

Engineering Manager

Los Angeles, CA · On-site

$200 - $275/hr

Equipment, Automation & Controls * Lead engineering support for major production equipment and ... Manage specialized systems including laser printing equipment and related technologies * Capital ...

Showing results 21-40

Automation Engineering Manager information

See California salary details

$88.8K

$136.2K

$171.2K

How much do automation engineering manager jobs pay per year?

As of Aug 19, 2026, the average yearly pay for automation engineering manager in California is $136,245.00, according to ZipRecruiter salary data. Most workers in this role earn between $116,000.00 and $157,900.00 per year, depending on experience, location, and employer.

What does an automation engineering manager do?

An Automation Engineering Manager oversees the design, implementation, and optimization of automated systems in manufacturing or software development. They lead a team of engineers to improve efficiency, reduce costs, and enhance productivity through automation technologies. Responsibilities include project management, system integration, troubleshooting, and ensuring compliance with industry standards. They collaborate with other departments to align automation strategies with company goals. Strong technical expertise, leadership skills, and problem-solving abilities are essential for this role.

What are the key skills and qualifications needed to thrive as an automation engineering manager?

An Automation Engineering Manager should have a strong background in automation technologies, process improvement, project management, and a relevant engineering degree. Familiarity with PLC/SCADA systems, robotics, industrial control systems, and certifications such as PMP or Six Sigma is often required. Excellent leadership, problem-solving, and communication skills help drive team performance and foster cross-functional collaboration. These capabilities are essential for delivering efficient automation solutions, ensuring project success, and guiding multidisciplinary teams in fast-paced environments.

What are some typical challenges faced by automation engineering managers in their day-to-day work?

Automation Engineering Managers often balance multiple projects and deadlines while ensuring high quality and compliance with industry standards. A common challenge is integrating new automation technologies with existing systems, which requires careful planning and troubleshooting. Collaboration with cross-functional teams—including operations, IT, and maintenance—is crucial for aligning technical solutions with business goals. Additionally, staying current with emerging automation trends and training team members on new tools is a key part of the role, helping drive continuous improvement and operational efficiency.

What are popular job titles related to Automation Engineering Manager jobs in California?

For Automation Engineering Manager jobs in California, the most frequently searched job titles are:

What job categories do people searching Automation Engineering Manager jobs in California look for?

The top searched job categories for Automation Engineering Manager jobs in California are:

What cities in California are hiring for Automation Engineering Manager jobs?

Cities in California with the most Automation Engineering Manager job openings:

Infographic showing various Automation Engineering Manager job openings in California as of August 2026, with employment types broken down into 90% Full Time, 9% Part Time, and 1% Contract. Highlights an 81% Physical, 2% Hybrid, and 17% Remote job distribution, with an average salary of $136,245 per year, or $65.5 per hour.

Automation Service Engineering Manager, Oncology

BillionToOne

Menlo Park, CA • On-site

Full-time

Medical, Retirement, PTO

Re-posted 9 days ago


Job description

The Automation Service Engineering Manager will oversee the design, deployment, and maintenance of automation systems within our molecular diagnostics labs and production facilities, providing service support to the oncology laboratory operations team. This role will manage a team of service engineers, ensuring smooth operation and optimization of automated systems, as well as the troubleshooting, maintenance, and repair of laboratory equipment utilized in the Next Generation Sequencing workflow. The ideal candidate will have a strong technical background in automation systems, team management experience, and the ability to work cross-functionally to ensure the reliability and scalability of operations. This role will report to the Director of Process & Development, Oncology. This is considered an onsite role and will require the majority of days to be spent in the office at the Menlo Park site.

Responsibilities:

  • Team Leadership & Scheduling: Lead, mentor, and manage a team of automation service engineers, fostering a culture of collaboration, innovation, and continuous improvement. Manage and develop careers for the automation service engineers and associates. Oversee a team that needs to cover different production shifts (including AM and PM shifts) to ensure continuous laboratory support.
  • System Maintenance: Ensure all automated equipment and systems are running optimally by overseeing routine maintenance, troubleshooting, and repairs. Troubleshoot, conduct root cause analysis, and problem solve on lab instruments.
  • Deployment & Integration: Oversee the design, installation, and integration of new automated systems, ensuring alignment with company needs and industry standards. Carry out Installation, Operational, and Process Qualifications on new equipment as necessary.
  • Process Optimization: Work closely with the operations, R&D, and production teams to identify areas where automation can enhance efficiency, quality, and throughput. Collaborate with Quality Control to ensure all documentation is completed accurately and in accordance with regulatory requirements.
  • Vendor Relations: Manage relationships with automation vendors, negotiate contracts, and ensure timely support and delivery of equipment and services. Effectively coordinate with vendors as required for equipment issues.
  • Inventory & Budgeting: Oversee the budget for automation services, ensuring cost-effective solutions while maintaining high performance and reliability of systems. Maintain equipment parts inventory and well-organized equipment records.
  • Compliance & Safety: Ensure all automated systems are compliant with relevant industry standards, safety protocols, and regulatory requirements. Implement and enforce safety procedures for the operation of automated equipment.
  • Data Analysis & Reporting: Monitor and analyze key performance indicators (KPIs) of automated systems, providing regular reports to senior management and recommending improvements based on data insights.

Requirements:

  • Bachelor's degree in Engineering, Automation, or a related field (Master's degree preferred), or a BS degree in a scientific discipline.
  • Proven 2+ years experience as an Lab Automation Service Engineering Manager or in a similar leadership role within a manufacturing or diagnostics environment.
  • 4+ years of experience in operating and troubleshooting laboratory equipment, preferably high-throughput molecular biology equipment, especially liquid handlers.
  • Extensive knowledge of automation systems, including robotics, PLCs, sensors, and control systems, with hands-on experience with installation, maintenance, and troubleshooting of automated equipment.
  • Strong customer focused service experience with proficiency in problem-solving with limited direction and making confident decisions.
  • Strong leadership and team management skills, with a track record of successfully leading and developing high-performing teams.
  • Familiarity with compliance and safety standards in a highly regulated environment (e.g., FDA, ISO), and experience working in a CLIA or similar regulated environment is preferred.
  • Strong communication and interpersonal skills, with the ability to collaborate across departments and communicate technical concepts to non-technical stakeholders.

Nice-to-Haves:

  • STRONGLY PREFERRED: Familiarity with Molecular Biology techniques, including next generation sequencing.
  • Experience in troubleshooting complex scripts is an added advantage.
  • Experience with data science / data engineering in an automated laboratory environment.

Benefits And Perks:

  • Working alongside brilliant, kind, passionate and dedicated colleagues, in an empowering environment, toward a global vision, striving for a future in which transformative molecular diagnostics can help millions of patients
  • Open, transparent culture that includes weekly Town Hall meetings
  • The ability to indirectly or directly change the lives of hundreds of thousands patients
  • Multiple medical benefit options; employee premiums paid 100% of select plans, dependents covered up to 80%
  • Extremely generous Family Bonding Leave for eligible employees (16 weeks, paid at 100%)
  • Supplemental fertility benefits coverage
  • Retirement savings program including a 4% Company match
  • Increase paid time off with increased tenure
  • Latest and greatest hardware (laptop, lab equipment, facilities)
  • Free daily on-site lunches provided from top eateries
  • A variety of perks on campus (state of the art gym, restaurant)
  • Free on-site EV charging (compatible with all EVs, including Tesla)

At BillionToOne, we are proud to offer a combination of a (1) base pay range (actual amount offered and leveling are based on experience and salary/equity options split that the candidate chooses), (2) generous equity options offering, (3) corporate bonus program, on top of (4) industry leading company benefits (free healthcare options, 401k match, very generous fully paid parental leave, etc.).

For this position, we offer a total compensation package up to $274,016 per year, including a base pay range of $158,401 - $203,651 per year.

BillionToOne is an equal opportunity employer. We do not discriminate on the basis of race, religion, color, national origin, gender, sexual orientation, age, marital status, veteran status, or disability status.