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Applications Engineering Manager Jobs in Boston, MA

Onto

Senior Applications Engineer

Wilmington, MA · On-site

... Systems Engineering, Software, Algorithms, Product Management, Marketing, and Customer-facing ... Represent Applications Engineering in product development reviews and technology planning ...

Compass

Engineering Manager

Boston, MA · On-site

$194K - $215K/yr

Engineering Manager As an Engineering Manager at Compass, you'll lead high-performing teams ... Practical experience building applications within SaaS, workflow tools, CRM, transactional systems ...

EPropelled Inc

Engineering Manager

Lowell, MA · On-site

... applications such as aviation, aerospace, and electric vehicles. ePropelled is looking for a ... engineers. QMS Requirements: * Demonstrate leadership and commitment to the Quality Management ...

EPropelled Inc

Engineering Manager

Lowell, MA · On-site

... applications such as aviation, aerospace, and electric vehicles. ePropelled is looking for a ... engineers. QMS Requirements: * Demonstrate leadership and commitment to the Quality Management ...

Veracode

Manager, Engineering

Burlington, MA

The Web Application Security team has a great group of engineers across multiple disciplines (QA, Dev, Ops, Cloud, etc.) that work together building and delivering the Veracode Web Application ...

Axon

Engineering manager embedded

Boston, MA · On-site

As an Engineering Manager on the Connected Devices team, you'll take on a wide range of ... Lead and grow a high performing team that designs and develops embedded applications and network ...

Veracode

Manager, Engineering

Burlington, MA · On-site

The Web Application Security team has a great group of engineers across multiple disciplines (QA, Dev, Ops, Cloud, etc.) that work together building and delivering the Veracode Web Application ...

HPR

Software Engineering Manager

Needham, MA

$166K - $248K/yr

The Software Engineering Manager will report to senior leadership developing high performance software and hardware appliances and/or applications for the financial markets. This position requires a ...

Onto

Senior Applications Engineer

Wilmington, MA · On-site

... Systems Engineering, Software, Algorithms, Product Management, Marketing, and Customer-facing ... Represent Applications Engineering in product development reviews and technology planning ...

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All JobsApplications Engineering JobsApplications Engineering Manager JobsApplications Engineering Manager Jobs in Boston, MA

Applications Engineering Manager information

See Boston, MA salary details

$61.9K

$148.8K

$214K

How much do applications engineering manager jobs pay per year?

As of Aug 11, 2026, the average yearly pay for applications engineering manager in Boston, MA is $148,836.00, according to ZipRecruiter salary data. Most workers in this role earn between $132,000.00 and $164,600.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as an applications engineering manager?

To thrive as an Applications Engineering Manager, you need expertise in application development, systems integration, project management, and a degree in engineering or a related field. Familiarity with tools such as Product Lifecycle Management (PLM) software, customer relationship management (CRM) platforms, and certifications like PMP or Six Sigma are commonly sought after. Leadership, strong communication, and problem-solving skills help you motivate teams and bridge technical and business requirements. These abilities are crucial for successfully overseeing engineering projects, ensuring technical excellence, and meeting customer needs in a collaborative environment.

What are some typical challenges faced by applications engineering managers, and how can they be addressed?

Applications Engineering Managers often face the challenge of balancing diverse customer requirements with resource constraints and technical feasibility. Managing cross-functional teams and ensuring clear communication between engineers, sales, and clients is key to overcoming these hurdles. Staying up-to-date with evolving technologies and industry standards also requires continuous learning and adaptability. By fostering a collaborative team culture, setting realistic project timelines, and maintaining open lines of communication with stakeholders, managers can navigate these challenges effectively.

How much should an applications engineering manager be paid?

An applications engineering manager's salary typically ranges from $100,000 to $150,000 annually, depending on experience, industry, and location. Higher salaries are common in regions with a high cost of living or in specialized sectors requiring advanced technical skills and leadership experience.

What does an applications engineering manager do?

An Applications Engineering Manager leads a team of engineers responsible for developing, optimizing, and supporting technical solutions for customers. They work closely with sales, product development, and clients to ensure that products meet customer needs and industry standards. Their role includes managing projects, mentoring engineers, and providing technical guidance to improve product applications. Additionally, they analyze customer requirements, troubleshoot issues, and drive innovation to enhance product performance and usability.

What are popular job titles related to Applications Engineering Manager jobs in Boston, MA? For Applications Engineering Manager jobs in Boston, MA, the most frequently searched job titles are:
What job categories do people searching Applications Engineering Manager jobs in Boston, MA look for? The top searched job categories for Applications Engineering Manager jobs in Boston, MA are:
What cities near Boston, MA are hiring for Applications Engineering Manager jobs? Cities near Boston, MA with the most Applications Engineering Manager job openings:
Applications Engineering Manager jobs near you
Infographic showing various Applications Engineering Manager job openings in Boston, MA as of August 2026, with employment types broken down into 1% As Needed, 84% Full Time, 13% Part Time, and 2% Contract. Highlights an 94% Physical, 2% Hybrid, and 4% Remote job distribution, with an average salary of $148,836 per year, or $71.6 per hour.

Senior Applications Engineer

Onto

Wilmington, MA • On-site

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 27 days ago

Job description

Onto Innovation is a leader in process control, combining global scale with an expanded portfolio of leading-edge technologies that include: 3D metrology spanning the chip from nanometer-scale transistors to micron-level die-interconnects; macro defect inspection of wafers and packages; metal interconnect composition; factory analytics; and lithography for advanced semiconductor packaging. Our breadth of offerings across the entire semiconductor value chain helps our customers solve their most difficult yield, device performance, quality, and reliability issues. Onto Innovation strives to optimize customers' critical path of progress by making them smarter, faster and more efficient.
Job Summary & Responsibilities
The Senior Applications Engineer is responsible for leading the development, validation, and deployment of advanced inspection solutions across Onto Innovation's inspection product portfolio. Serving as a key technical leader within the Product Lifecycle (PLC) Applications Development organization, this role drives product readiness, application innovation, customer adoption, and technology commercialization.
The successful candidate will work closely with Product Development, Systems Engineering, Software, Algorithms, Product Management, Marketing, and Customer-facing organizations to transform emerging technologies into scalable, production-ready customer solutions. This position plays a critical role in New Product Introduction (NPI), strategic customer engagements, application development, competitive benchmarking, and roadmap validation across wafer inspection, advanced packaging, and semiconductor manufacturing applications.
This role operates in a highly collaborative, multinational environment, partnering with engineering teams, field organizations, and customers across North America, Asia, and Europe. The successful candidate must be comfortable working across diverse cultures, time zones, and business environments while supporting global product deployment, customer evaluations, product demonstrations, and strategic business initiatives. The position requires domestic and international travel of up to 30%.
Key Responsibilities
Application Development & Technical Leadership
  • Lead development and optimization of advanced inspection recipes for defect detection, classification, process monitoring, and yield improvement applications.

  • Design customer-focused workflows that demonstrate product differentiation, manufacturing relevance, and business value.

  • Establish and validate Best Known Methods (BKMs) for global deployment across multiple inspection platforms.

  • Drive application strategies supporting wafer inspection, advanced packaging, heterogeneous integration, and emerging semiconductor technologies.

  • Provide technical leadership and mentorship to junior engineers and cross-functional project teams.

Product Validation & New Product Introduction (NPI)
  • Lead application characterization, benchmarking, and qualification activities for new products and roadmap technologies.

  • Develop and execute comprehensive validation plans covering sensitivity, accuracy, throughput, nuisance rate, repeatability, and production readiness.

  • Define customer-relevant use cases and performance benchmarks for product acceptance.

  • Support release readiness reviews and ensure successful product deployment.

  • Partner with Product Management and Development teams to influence product requirements and roadmap priorities.

Customer Demonstrations & Strategic Engagements
  • Lead technical demonstrations for customers, executive reviews, product launches, and marketing initiatives.

  • Develop compelling evaluation workflows that highlight product capabilities and competitive advantages.

  • Support strategic customer evaluations, proof-of-concept projects, and competitive benchmark studies.

  • Define success criteria and technical evaluation methodologies for customer engagements.

  • Serve as a technical expert and trusted advisor during critical customer programs.

Cross-Functional Collaboration
  • Collaborate closely with Systems, Optics, Software, Algorithms, Product Management, Marketing, and Business Units.

  • Translate customer requirements into actionable product and application requirements.

  • Provide structured application feedback that influences technology development and product specifications.

  • Coordinate activities across multiple engineering and business organizations to achieve product readiness objectives.

  • Represent Applications Engineering in product development reviews and technology planning discussions.

Data Analytics & Performance Optimization
  • Analyze inspection, process, and customer datasets to identify optimization opportunities and drive performance improvements.

  • Lead machine learning and Automated Defect Classification (ADC) validation initiatives.

  • Develop statistical methodologies and data-driven approaches for application optimization.

  • Generate performance reports, benchmark analyses, and customer-facing technical documentation.

  • Drive continuous improvement initiatives that enhance product performance and customer productivity.

Documentation, Knowledge Transfer & Training
  • Develop application guides, validation reports, best practices, deployment procedures, and technical documentation.

  • Establish and maintain global application standards and processes.

  • Deliver training programs for engineering teams, field organizations, and customers.

  • Lead knowledge-transfer activities supporting global application deployment and product adoption.

  • Mentor junior engineers and contribute to organizational capability development.

Qualifications
  • Bachelor's degree in Electrical Engineering, Optical Engineering, Materials Science, Physics, Computer Engineering, Chemical Engineering, or a related technical discipline with 5+ years of experience in semiconductor inspection, metrology, applications engineering, process engineering, yield engineering, or related fields.

OR
  • Master's degree in a relevant engineering or scientific discipline with 2+ years of industry experience in semiconductor inspection, metrology, applications engineering, process engineering, or related technical fields.

OR
  • Ph.D. in Electrical Engineering, Optical Engineering, Materials Science, Physics, Computer Engineering, Chemical Engineering, or a related technical discipline.

  • Strong understanding of semiconductor manufacturing processes, defect inspection principles, and process control methodologies.

  • Demonstrated ability to solve complex technical problems through data-driven analysis.

  • Strong written, verbal, presentation, and interpersonal communication skills.

  • Experience working effectively in multinational and multicultural environments with geographically distributed teams and customers.

  • Ability to collaborate across multiple functions and organizational levels in a fast-paced environment.

  • Ability and willingness to travel domestically and internationally up to 30%.

Preferred Qualifications
  • Experience with semiconductor inspection, AOI, metrology, advanced packaging, process control, or yield enhancement solutions.

  • Knowledge of machine learning, image processing, computer vision, and Automated Defect Classification (ADC) technologies.

  • Proficiency with analytical and data science tools such as Python, MATLAB, SQL, JMP, or equivalent platforms.

  • Experience supporting New Product Introduction (NPI), product qualification, and technology commercialization activities.

  • Experience leading customer demonstrations, proof-of-concept evaluations, or strategic technical projects.

  • Familiarity with semiconductor manufacturing workflows, process monitoring, and yield improvement methodologies.

  • Proven ability to lead cross-functional technical initiatives and influence product direction.

  • Experience mentoring engineers and providing technical leadership across organizations.

Why Join Onto Innovation?
At Onto Innovation, we believe your work should matter-and so should your well-being. That's why we offer competitive salaries and a comprehensive benefits package designed to support you and your family. From health, dental, and vision coverage to life and disability insurance, PTO, and a 401(k) with employer match, we've got you covered. You'll also enjoy access to our Employee Stock Purchase Program (ESPP), wellness initiatives, and cutting-edge tools-all within a collaborative, inclusive culture where your contributions are valued and recognized.
Compensation & Growth
• Base Salary Range:
$115,200.00 - $172,800.00, offered in good faith and based on experience, location, and qualifications.
  • Additional Rewards: Annual bonus opportunities and potential long-term incentives tied to both company and individual success.

Empowering Every Voice to Shape the Future:
Onto Innovation is committed to creating a workplace where every qualified candidate has an equal opportunity to succeed. We evaluate applicants based on skills, experience, and potential - without regard to race, color, religion, gender, sexual orientation, national origin, age, disability, veteran status, or any other characteristic protected by law. We believe diversity of thought and background drives innovation and strengthens our team.
Important Note on Export Compliance
For certain positions requiring access to technical data, U.S. export licensing review may be necessary for applicants who are not U.S. Citizens, Permanent Residents, or other protected persons under 8 U.S.C. 1324b(a)(3).
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About ONTO

Sourced by ZipRecruiter

Industry

Specialized design services

Company size

1 - 10 Employees

Headquarters location

New York, NY, US

Year founded

2021

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