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Accounting Software Coding Jobs in Boston, MA (NOW HIRING)

Fractional Controller

Reading, MA · On-site

$150 - $210/hr

... Code: APH-2605 Position Overview Aphios Corporation, a clinical-stage biotechnology company ... Sage accounting software or another accounting system capable of supporting GAAP-compliant ...

Senior Software Engineer

Andover, MA · On-site

$123K - $163K/yr

... code • Participate in application architecture and technical design decisions • Improve system ... accounting, investment management, or related industries • Experience integrating with ERP, ...

AR Specialist

Watertown, MA · On-site

$60K/yr

Recording and coding customer payments in the accounting system. * Applying cash receipts to ... software. * 3 years experience of customer service and negotiation. Compensation: $60,000 USD. Upon ...

AR Specialist

Boston, MA · On-site

$60K/yr

Recording and coding customer payments in the accounting system. * Applying cash receipts to ... software. * 3 years experience of customer service and negotiation. Compensation: $60,000 USD. Upon ...

Senior Software Engineer

Boston, MA

$133K - $175K/yr

CorporateOS is the arm that supports Anduril's finance and accounting teams with first class ... Level up our team's applications through quality code contribution and writing tests. * Leverage ...

Project Accountant

Boston, MA · On-site

$66K - $86K/yr

... ensuring accurate cost coding and adherence to budgets. * Compliance Management : Oversee ... accounting, with a strong understanding of project contracts and change order documents. * Software ...

Staff Software Engineer

Boston, MA · On-site

$22K - $292K/yr

CorporateOS is the arm that supports Anduril's finance and accounting teams with first class ... Level up our team's applications through quality code contribution and writing tests. * Leverage ...

Senior Software Engineer

Boston, MA · On-site

$191 - $253/hr

CorporateOS is the arm that supports Anduril's finance and accounting teams with first class ... Level up our team's applications through quality code contribution and writing tests. * Leverage ...

Showing results 21-40

Accounting Software Coding information

See Boston, MA salary details

$44K

$75.7K

$212.4K

How much do accounting software coding jobs pay per year?

As of Sep 6, 2026, the average yearly pay for accounting software coding in Boston, MA is $75,672.00, according to ZipRecruiter salary data. Most workers in this role earn between $58,100.00 and $72,200.00 per year, depending on experience, location, and employer.

What is accounting software coding?

Accounting software coding involves designing, developing, and maintaining computer programs that help businesses manage their financial transactions and records. This can include building features for invoicing, payroll, expense tracking, and reporting based on accounting principles. Professionals in this field need a strong understanding of both software development and accounting practices to ensure accuracy and compliance. These specialists often work with programming languages like Python, Java, or C#, and may integrate their solutions with other business systems.

What are the key skills and qualifications needed to thrive in accounting software coding?

To thrive in Accounting Software Coding, you need strong programming skills (often in languages like Java, C#, or Python), a solid understanding of accounting principles, and a relevant degree in computer science or accounting. Experience with ERP systems, accounting software platforms (like QuickBooks or SAP), and familiarity with databases and APIs are typically required. Analytical thinking, problem-solving, and effective communication are valuable soft skills for collaborating with stakeholders and troubleshooting complex issues. These skills and qualities are crucial to building reliable, compliant, and user-friendly accounting solutions that meet business needs.

What are some common challenges faced by professionals coding for accounting software, and how can they be addressed?

Professionals coding for accounting software often encounter challenges such as ensuring compliance with evolving financial regulations, handling complex data integrations, and maintaining data security. It’s crucial to stay up-to-date with accounting standards and work closely with domain experts to design accurate financial modules. Additionally, collaborating with QA teams to rigorously test features helps catch errors early, and following secure coding practices minimizes risks related to sensitive financial data.

What is the difference between Accounting Software Coding vs Bookkeeping?

AspectAccounting Software CodingBookkeeping
Primary FocusDeveloping and customizing accounting software featuresRecording financial transactions
Skills RequiredProgramming, software development, accounting knowledgeData entry, attention to detail, basic accounting
Work EnvironmentSoftware companies, finance departments, tech firmsSmall businesses, accounting firms, finance departments
CertificationsProgramming certifications, accounting credentialsBookkeeping certifications, basic accounting courses

Accounting Software Coding involves creating and customizing software tools for accounting tasks, requiring programming skills. Bookkeeping focuses on recording financial transactions manually or digitally, emphasizing accuracy and attention to detail. While both roles support financial management, they differ significantly in skills and responsibilities.

How to become an accounting software developer?

To become an accounting software developer, you typically need a bachelor's degree in computer science, software engineering, or a related field. Gaining experience in programming languages such as Java, C++, or Python, and understanding accounting principles and software development processes are essential. Familiarity with database management, version control, and accounting software platforms can also improve job prospects.

What are popular job titles related to Accounting Software Coding jobs in Boston, MA?

For Accounting Software Coding jobs in Boston, MA, the most frequently searched job titles are:

What job categories do people searching Accounting Software Coding jobs in Boston, MA look for?

The top searched job categories for Accounting Software Coding jobs in Boston, MA are:

What cities near Boston, MA are hiring for Accounting Software Coding jobs?

Cities near Boston, MA with the most Accounting Software Coding job openings:

Fractional Controller

Aphios Corporation

Reading, MA • On-site

$150 - $210/hr

Other

Posted 5 days ago


Key responsibilities

  • Maintain accurate general ledger, balance sheet, income statement, and cash-flow reporting.

  • Manage monthly, quarterly, and annual financial close processes.

  • Prepare financial statements in accordance with U.S. GAAP and support audit readiness.


Job description

Fractional Controller – Biotechnology / Pre-IPO


Aphios CorporationNorth Reading, Massachusetts Area | Fractional / ConsultingJob Code: APH-2605


Position Overview

Aphios Corporation, a clinical-stage biotechnology company advancing a diversified portfolio of therapeutic products and proprietary platform technologies, is seeking an experienced Fractional Controller to strengthen the Company’s accounting, financial reporting, internal controls, and audit readiness as Aphios advances its clinical programs, strategic partnerships, financing activities, and planned path toward the public markets.


This is a hands-on senior accounting position suited for an experienced Controller, Assistant Controller, CPA, or senior accounting professional who is comfortable working with an entrepreneurial biotechnology company while establishing the financial discipline and reporting infrastructure expected of a substantially larger organization.


The successful candidate should have strong accounting and financial reporting experience and familiarity with Sage accounting software or another accounting system capable of supporting GAAP-compliant financial reporting and robust internal controls.


Experience with NIH/SBIR funding, biotechnology accounting, financial audits, SEC reporting, IPO preparation, or public-company accounting is highly desirable.


Key Responsibilities

  • Maintaining accurate general ledger, balance sheet, income statement, and cash-flow reporting

  • Monthly, quarterly, and annual financial close

  • Accounts payable, accounts receivable, payroll coordination, and cash-management oversight

  • Bank and balance-sheet reconciliations

  • Budget-to-actual reporting and financial analysis

  • Maintaining appropriate accounting policies, procedures, documentation, and internal controls

  • Preparing financial statements in accordance with U.S. Generally Accepted Accounting Principles (GAAP)

  • Maintaining and improving the Company’s Sage accounting environment, or assisting with migration to or implementation of an appropriate scalable accounting system

  • Preparing schedules and supporting documentation for independent financial statement audits

  • Working with external accountants and auditors to maintain GAAP-compliant, audit-ready financial records

  • Supporting development of accounting controls and reporting practices appropriate for an organization preparing for potential SEC reporting and public-company requirements

  • Assisting management with financial information required for financing, investor, strategic partnership, and due-diligence activities

  • Supporting accounting across Aphios Corporation and affiliated entities as appropriate


NIH / SBIR Experience – Highly Desirable

Aphios has a significant history of federally funded research and development. Experience with NIH, SBIR/STTR, or other federal grant accounting would therefore be particularly valuable.


Relevant experience may include:



  • Tracking grant expenditures and allowable costs

  • Direct and indirect cost allocation

  • Project and grant-level accounting

  • Payroll and labor allocationFinancial reporting and documentation supporting NIH awards

  • Audit-ready documentation of federally funded expenditures

  • Familiarity with applicable federal grant accounting and compliance requirements


Pre-IPO / Public Company Experience – Preferred

As Aphios strengthens its financial infrastructure in anticipation of future capital formation and potential entry into the public markets, additional value would be placed on experience involving one or more of the following:



  • GAAP-compliant financial reporting and external audits

  • IPO, direct listing, reverse merger, SPAC, or other public-market transactions

  • Public-company accounting and reporting practices

  • SOX/internal-control development or implementation

  • Audit Committee interaction

  • Equity, stock-based compensation, and capitalization accounting

  • Investor, financing, and transaction due diligence


Qualifications
Required

  • Bachelor’s degree in Accounting, Finance, or related discipline

  • Significant hands-on accounting and financial reporting experience

  • Strong knowledge and practical application of U.S. GAAP

  • Experience with Sage or comparable accounting/ERP software

  • Experience preparing for and supporting independent financial audits

  • Ability to operate independently in a small-company environment while maintaining institutional-quality financial discipline


Preferred

  • CPA or equivalent senior accounting credentials

  • Controller, Assistant Controller, Audit Manager, or equivalent senior accounting experience

  • Biotechnology, pharmaceutical, life sciences, or technology-company experience

  • NIH/SBIR/STTR or federal grant accounting experience

  • Pre-IPO or public-company accounting experience

  • SEC reporting and SOX familiarity

  • Experience working with independent auditors and Audit Committees

  • Experience establishing or upgrading accounting systems, policies, controls, and financial reporting infrastructure for a growing company


Position Structure

This is initially envisioned as a Fractional or consulting position, with hours and structure determined based on the candidate’s experience and Aphios’ evolving requirements.


The role could expand as the Company’s clinical programs, financing activities, strategic partnerships, and public-market preparations progress.


About Aphios

Aphios Corporation is advancing a portfolio that includes a planned Phase 3 clinical program for Zindol®, planned Phase 2b programs in opioid addiction and chronic epilepsy, and additional therapeutic programs progressing through IND-enabling development.


Aphios combines clinical-stage assets with proprietary pharmaceutical and nanotechnology platforms and is pursuing strategic partnerships, institutional financing, and longer-term public-market opportunities.

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Aphios logo

About Aphios

Sourced by ZipRecruiter

Industry

Biotechnology research and development

Company size

11 - 50 Employees

Headquarters location

Woburn, MA, US

Year founded

1993

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