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Accountant Not For Profit Jobs in Rochester, MN (NOW HIRING)

Community Health Service Inc.

Senior Accountant

Rochester, MN · Remote

$72K - $90K/yr

CHSI is a private, non-profit organization established in 1973 to serve the health needs of migrant ... The Senior Accountant - Finance, Accounting & Grants plays a critical leadership role in supporting ...

Hawkins Ash CPAs, LLP

Senior Audit Associate

Rochester, MN · On-site

$65K - $85K/yr

We provide audit, tax, advisory, and accounting services to businesses, nonprofit organizations, credit unions, and individuals throughout the region. Our firm combines the expertise and resources of ...

Hawkins Ash CPAs, LLP

Senior Tax Associate

Rochester, MN · On-site

$65K - $85K/yr

We provide audit, tax, advisory, and accounting services to businesses, nonprofit organizations, credit unions, and individuals throughout the region. Our firm combines the expertise and resources of ...

Hawkins Ash CPAs, LLP

Tax Manager

Rochester, MN · On-site

$90K - $130K/yr

We provide audit, tax, advisory, and accounting services to businesses, nonprofit organizations, credit unions, and individuals throughout the region. Our firm combines the expertise and resources of ...

All JobsAccountant Not For Profit JobsAccountant Not For Profit Jobs in Rochester, MN

Accountant Not For Profit information

See Rochester, MN salary details

$34.6K

$69.5K

$110.3K

How much do accountant not for profit jobs pay per year?

As of Aug 8, 2026, the average yearly pay for accountant not for profit in Rochester, MN is $69,453.00, according to ZipRecruiter salary data. Most workers in this role earn between $54,400.00 and $79,800.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as an accountant in the not-for-profit sector, and why are they important?

To thrive as an Accountant in the Not For Profit sector, you need a solid understanding of fund accounting, financial reporting, and regulatory compliance, typically supported by a degree in accounting or finance and relevant certifications such as CPA or CMA. Familiarity with nonprofit-specific accounting software like QuickBooks Nonprofit, Blackbaud, or Sage Intacct is important. Strong attention to detail, ethical judgment, and clear communication help you navigate donor requirements and collaborate with diverse stakeholders. These skills ensure accurate financial stewardship, transparency, and trust—critical for maintaining funding and fulfilling the organization's mission.

What is the difference between Accountant Not For Profit vs Bookkeeper Not For Profit?

AspectAccountant Not For ProfitBookkeeper Not For Profit
CredentialsCPA or equivalentBookkeeping certification or experience
Work EnvironmentNonprofit organizations, financial reportingDay-to-day transaction recording
ResponsibilitiesFinancial statements, compliance, auditsData entry, ledger management

Accountant Not For Profit professionals typically handle complex financial reporting, audits, and compliance for nonprofit organizations, often requiring CPA credentials. Bookkeeper Not For Profit roles focus on recording daily transactions and maintaining accurate ledgers. While both work within nonprofit settings, accountants have broader responsibilities related to financial analysis and reporting, whereas bookkeepers concentrate on transaction recording and data management.

What are some unique challenges faced by accountants working in not-for-profit organizations compared to those in the private sector?

Accountants in not-for-profit organizations often encounter unique challenges such as managing restricted funds, ensuring compliance with specific grant requirements, and navigating complex reporting standards like the IRS Form 990. Unlike the private sector, not-for-profits focus less on profitability and more on accountability and transparency to donors, grantors, and regulatory bodies. This requires accountants to be adept at fund accounting, prepare detailed financial reports for multiple stakeholders, and collaborate closely with program managers to track the financial impact of various initiatives.

What does an accountant do in a not-for-profit organization?

An accountant in a not-for-profit organization manages financial records, ensures compliance with regulations, and prepares reports for donors, boards, and regulatory agencies. Their work involves tracking funds, budgeting, handling grants, and ensuring that donations are used according to donor restrictions. They play a crucial role in maintaining transparency, supporting fundraising efforts, and ensuring the organization's long-term financial health.
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Accountant Not For Profit jobs near you

Parish Support Accountant

Diocese of Winona-Rochester

Rochester, MN • On-site

$53K - $70K/yr

Full-time

Posted yesterday

New

Job description

The Accountant, reporting to the Parish Support Coordinator, is responsible for preparation, production, and maintenance of client parish financial records using Diocesan centralized financial software. Provides client parish financial information to Parish Support Coordinator and Diocesan Finance Staff. Assists client parish leadership in fulfillment of their parish, diocesan, and regulatory reporting requirements.
 
Essential Duties and Responsibilities
 
  • Weekly and monthly processing of accounts payable, accounts receivable, and payroll for client parishes, cemeteries, and schools.
  • Bank account and balance sheet reconciliations for client parishes, cemeteries, and schools.
  • Monthly financial statement production and delivery to client parishes, cemeteries, and schools.
  • Grant tracking, monitoring, and reporting.
  • Preparation and support for audits.
  • Budget development and reporting support.
  • Continually improving accounting, operations, internal controls, and compliance policies and procedures to align with Diocesan Policies and Procedures, Generally Accepted Accounting Principles, and government regulations.
  • Other tasks as assigned by the Parish Support Coordinator and/or Diocesan Chief Financial Officer

Other Required Knowledge, Skills and Abilities
 
  • Demonstrate superb verbal, written and interpersonal skills
  • Must be able to work collaboratively in a team environment; serve Chancery where needed.
  • Knowledge of, or interest in learning multiple accounting and payroll systems.
  • Able to respond to and change directions rapidly.
  • Ability to maintain a positive and professional demeanor.
  • Must be detail oriented and accurate.
  • Maintain a high level of confidentiality.
  • Must be 10-key proficient.
  • Ability to operate office equipment (copy machine, computer, printer, postage machine).
  • Desire to pursue continuous improvement and excellence.
  • Willing to aid others whenever workload is light.
Qualifications

Education:
            Required:       Associate’s Degree in Accounting or a related field.
            Preferred:      Bachelor’s Degree in Accounting or a related field.
Experience:
  • 3 to 5 years related office administration, accounts payable/accounts receivable experience.
  • Previous administrative experience preferably gained in a finance or accounting setting.
  • Previous accounting experience preferably in a non-profit or religious institutional setting.
  • Bi-Cultural Hispanic or Bi-Lingual Spanish is desirable