Eli Lilly and Company is a global healthcare leader dedicated to improving lives through innovative medicines. The role involves engineering integrations between Agentic AI and laboratory systems to ...

60 Lilly Jobs Hiring Near You
Eli Lilly and Company is a global healthcare leader dedicated to improving lives through innovative medicines. The role involves engineering integrations between Agentic AI and laboratory systems to ...
Advisor - Agent Research
Indianapolis, IN · On-site
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana, dedicated to improving lives through innovative medicines. They are seeking a scientist-engineer hybrid to ...
Advisor - Agent Research
Indianapolis, IN · On-site
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana, dedicated to improving lives through innovative medicines. They are seeking a scientist-engineer hybrid to ...
Job Summary As a TSMS Lab Advisor at Eli Lilly and Company, you will be a key contributor to our Technical Services and Manufacturing Science (TSMS) team, providing expert scientific and technical ...
Job Summary As a TSMS Lab Advisor at Eli Lilly and Company, you will be a key contributor to our Technical Services and Manufacturing Science (TSMS) team, providing expert scientific and technical ...
NC · On-site
As a condition of employment with Eli Lilly and Company and its subsidiaries in the United States and Puerto Rico, you must be fully COVID-19 vaccinated and provide proof of vaccination satisfactory ...
NC · On-site
As a condition of employment with Eli Lilly and Company and its subsidiaries in the United States and Puerto Rico, you must be fully COVID-19 vaccinated and provide proof of vaccination satisfactory ...
The Senior Principal Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or ...
The Senior Principal Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or ...
The Senior Principal Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or ...
The Senior Principal Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or ...
Sr. Scientist, Analytical CMC
Boston, MA · On-site
Verve Therapeutics, a wholly owned subsidiary of Eli Lilly & Company within Lilly Research Labs, is a clinical-stage genetic medicines company established with a mission to solve the global health ...
Sr. Scientist, Analytical CMC
Boston, MA · On-site
Verve Therapeutics, a wholly owned subsidiary of Eli Lilly & Company within Lilly Research Labs, is a clinical-stage genetic medicines company established with a mission to solve the global health ...
Senior Principal Engineer - Automation Engineering - Laboratory and Analytical Equipment - Lilly ...
The Senior Principal Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or ...
Senior Principal Engineer - Automation Engineering - Laboratory and Analytical Equipment - Lilly ...
The Senior Principal Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or ...
The Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or more operating ...
The Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or more operating ...
Advisor - Computational Statistics
Boston, MA · On-site
$166.50K - $266.20K/yr
Verve Therapeutics, a wholly owned subsidiary of Eli Lilly & Company within Lilly Research Labs, is a clinical-stage genetic medicines company established with a mission to solve the global health ...
Advisor - Computational Statistics
Boston, MA · On-site
$166.50K - $266.20K/yr
Verve Therapeutics, a wholly owned subsidiary of Eli Lilly & Company within Lilly Research Labs, is a clinical-stage genetic medicines company established with a mission to solve the global health ...
Senior Principal Engineer - Automation Engineering - Laboratory and Analytical Equipment - Lilly ...
The Senior Principal Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or ...
Senior Principal Engineer - Automation Engineering - Laboratory and Analytical Equipment - Lilly ...
The Senior Principal Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or ...
Advisor - Agent Research
Boston, MA · On-site
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana, dedicated to improving lives through innovative medicines. They are seeking a scientist-engineer hybrid to ...
Advisor - Agent Research
Boston, MA · On-site
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana, dedicated to improving lives through innovative medicines. They are seeking a scientist-engineer hybrid to ...
Associate Director - Technical Services/Manufacturing Science (TSMS) - API External Manufacturing...
Indianapolis, IN · On-site
$123K - $180.40K/yr
Eli Lilly and Company is seeking an experienced and highly motivated Associate Director to join our Technical Services/Manufacturing Science (TS/MS) team, specializing in Peptides. In this role, you ...
Associate Director - Technical Services/Manufacturing Science (TSMS) - API External Manufacturing...
Indianapolis, IN · On-site
$123K - $180.40K/yr
Eli Lilly and Company is seeking an experienced and highly motivated Associate Director to join our Technical Services/Manufacturing Science (TS/MS) team, specializing in Peptides. In this role, you ...
Director - Software Product Management, Enterprise AI Orchestration
Indianapolis, IN · On-site
$204.30K - $214K/yr
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana. They are seeking a Director for Software Product Management in Enterprise AI Orchestration to define and ...
Director - Software Product Management, Enterprise AI Orchestration
Indianapolis, IN · On-site
$204.30K - $214K/yr
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana. They are seeking a Director for Software Product Management in Enterprise AI Orchestration to define and ...
The Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or more operating ...
The Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or more operating ...
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana, dedicated to improving lives through innovative medicines. They are seeking a scientist-engineer hybrid to ...
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana, dedicated to improving lives through innovative medicines. They are seeking a scientist-engineer hybrid to ...
The Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or more operating ...
The Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The engineer will provide automation support for one or more operating ...
Systems Engineer (R4-R6)
$173.92K/yr
Eli Lilly and Company seeks a Systems Engineer (R4-R6) to design, develop, and maintain Manufacturing Execution System (MES) software applications. Act as technical lead and integrate production ...
Systems Engineer (R4-R6)
$173.92K/yr
Eli Lilly and Company seeks a Systems Engineer (R4-R6) to design, develop, and maintain Manufacturing Execution System (MES) software applications. Act as technical lead and integrate production ...
Principal Product Manager - Cortex Platform Software Product Engineering (SPE) | Eli Lilly and Company Lilly is leading agentic transformation in the life sciences, and our Cortex enterprise AI ...
Principal Product Manager - Cortex Platform Software Product Engineering (SPE) | Eli Lilly and Company Lilly is leading agentic transformation in the life sciences, and our Cortex enterprise AI ...
Advisor - Agent Research
San Diego, CA · On-site
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana, dedicated to improving lives through innovative medicines. They are seeking a scientist-engineer hybrid to ...
Advisor - Agent Research
San Diego, CA · On-site
Eli Lilly and Company is a global healthcare leader headquartered in Indianapolis, Indiana, dedicated to improving lives through innovative medicines. They are seeking a scientist-engineer hybrid to ...
Eli Lilly Jobs Information
What is it like to work at Lilly?
The company's team structure is organized around therapeutic areas, with cross-functional teams working together to develop and commercialize new medicines, and employees have access to state-of-the-art facilities and cutting-edge technology to support their work. Additionally, Lilly offers a range of employee benefits and programs to support work-life balance and professional development.
Working at Eli Lilly may appeal to candidates who are passionate about making a difference in people's lives, are driven by a desire to innovate and improve healthcare outcomes, and value a dynamic and inclusive work environment that offers opportunities for growth and development.
Do workers at Eli Lilly and Company get paid breaks?
46% of people say they don’t get paid breaks.
Based on data from 46 people who took the Breakroom Quiz between November 2024 and April 2026.
Does Eli Lilly and Company pay people when they’re sick?
92% of people say they would get paid if they were sick but scheduled to work.
Based on data from 37 people who took the Breakroom Quiz between April 2025 and April 2026.
At Eli Lilly and Company, are sick days and vacation days separate paid time off?
69% of people say they don’t have to use vacation days when they’re out sick.
Based on data from 29 people who took the Breakroom Quiz between May 2025 and April 2026.
Is the health insurance from Eli Lilly and Company affordable enough for their workers?
100% of people say the health insurance costs are okay
Based on data from 37 people who took the Breakroom Quiz between April 2025 and April 2026.
Do people get paid time off at Eli Lilly and Company?
97% of people say they get paid time off.
Based on data from 31 people who took the Breakroom Quiz between May 2025 and April 2026.
Do workers at Eli Lilly and Company worry about hours?
94% of people report they don’t worry about getting enough hours.
Based on data from 36 people who took the Breakroom Quiz between November 2024 and April 2026.
Do Eli Lilly and Company workers get to choose the shifts they work?
68% report that they don’t have enough control over which shifts they work.
Based on data from 28 people who took the Breakroom Quiz between November 2024 and April 2026.
How easy is it for Eli Lilly and Company workers to change shifts?
45% of people report that it’s hard to change shifts if they need to.
Based on data from 20 people who took the Breakroom Quiz between December 2024 and January 2026.
How easy is it to get time off at Eli Lilly and Company?
97% of people report it’s easy to get time off.
Based on data from 33 people who took the Breakroom Quiz between April 2025 and April 2026.
Do Eli Lilly and Company managers change schedules at the last minute?
95% of people say their manager doesn’t change their shift schedule at the last minute.
Based on data from 37 people who took the Breakroom Quiz between November 2024 and April 2026.
Do workers at Eli Lilly and Company do extra work that they don't get paid for?
71% of people report that they don’t do extra unpaid work.
Based on data from 34 people who took the Breakroom Quiz between November 2024 and April 2026.
How easy is it to take sick days at Eli Lilly and Company?
94% of people report that it’s easy to take time off if they are sick.
Based on data from 35 people who took the Breakroom Quiz between April 2025 and April 2026.
Is working at Eli Lilly and Company good if you’re a parent or caregiver?
84% of people who care for a child or other relative report this is a good place to work.
Based on data from 19 people who took the Breakroom Quiz between November 2024 and March 2026.
Do people at Eli Lilly and Company feel treated with respect by their managers?
77% of people say they’re treated with respect by their managers.
Based on data from 35 people who took the Breakroom Quiz between April 2025 and April 2026.
Do people at Eli Lilly and Company get to take their breaks without interruption?
73% of people report that they get to take their breaks without interruption.
Based on data from 37 people who took the Breakroom Quiz between April 2025 and April 2026.
Is it stressful to work at Eli Lilly and Company?
57% of people say they often feel stressed out at work.
Based on data from 35 people who took the Breakroom Quiz between April 2025 and April 2026.
Do people at Eli Lilly and Company enjoy their jobs?
73% of people report they enjoy their job.
Based on data from 37 people who took the Breakroom Quiz between April 2025 and April 2026.
Do people at Eli Lilly and Company recommend working with their team?
34% of people report that they wouldn’t recommend working with their immediate team to a friend.
Based on data from 38 people who took the Breakroom Quiz between April 2025 and April 2026.
Do people get enough training when they start at Eli Lilly and Company?
68% of people report they got enough training when they started working here.
Based on data from 37 people who took the Breakroom Quiz between April 2025 and April 2026.
Do people get support to advance at Eli Lilly and Company?
In the last year, 42% of people report not being given support to advance their career here.
Based on data from 36 people who took the Breakroom Quiz between April 2025 and April 2026.
Do people think Eli Lilly and Company’s headquarters understands what’s happening where they work?
66% of people think that this employer’s headquarters or owners don’t have a good understanding of what’s really happening where they work.
Based on data from 32 people who took the Breakroom Quiz between April 2025 and April 2026.
Do workers feel well informed about how Eli Lilly and Company is doing?
86% of people feel that they are kept well informed about how the company is doing as a whole.
Based on data from 37 people who took the Breakroom Quiz between April 2025 and April 2026.
Sr. Principal or Engineering Advisor - Agentic Lab Automation Integration
Eli Lilly and CompanyBoston, MA • On-site
Full-time
Posted 22 days ago
Eli Lilly and Company rating
8.8
Based on 62 frontline employees who took The Breakroom Quiz
11th of 70 rated pharmaceutical
Job description
Eli Lilly and Company is a global healthcare leader dedicated to improving lives through innovative medicines. The role involves engineering integrations between Agentic AI and laboratory systems to enhance molecule discovery, focusing on lab automation and data connectivity.
Responsibilities:
• Build multi-agent systems with robust orchestration, state management, error recovery, and tool integration
• Prototype and iterate rapidly on agent planning strategies, memory systems, and human-in-the-loop patterns
• Design agent architectures that interface with lab automation platforms (Hamilton, Tecan, Opentrons) for closed-loop experimental execution
• Partner with automation engineers and scientists to transition prototypes into reliable lab operations
• Deploy and maintain containerized services using Docker and Kubernetes with GitOps and CI/CD practices
• Integrate cloud-based orchestration frameworks such as Argo on Kubernetes with laboratory control systems
• Represent Frontier AI in the broader AI@Lilly and external AI research community: publish, give talks, review papers, and scout emerging trends.
• Evaluate external vendors, open-source projects, and academic collaborations for strategic fit.
Qualifications:
Required:
• PhD (or MS + 2 yrs / BS + 5 yrs equivalent experience) in Chemical / Mechanical Engineering, Robotics, Computer Engineering, or related discipline with demonstrated wet-lab automation experience.
• Demonstrated experience with laboratory automation systems and LIMS engineering
• Direct experience integrating software control and/or AI systems with lab automation platforms (liquid handlers, analytical instruments, robotic workflows)
• Strong experience with containerization (Docker) and Kubernetes-based orchestration in production environments
• Experience building scalable and production-level python applications using tools like Redis, FastAPI, flask/streamlit, pytest, etc. (GitHub portfolio a plus)
Preferred:
• Experience with LLM post-training, fine-tuning, or RLHF
• Direct experience integrating AI or algorithmic decision systems with laboratory automation
• Proven ability to build and maintain the translation layer between high-level planning logic and low-level instrument control
• Demonstrable research experience, evidenced by contributions to projects, and ideally through publications in relevant ML/NLP venues (e.g., NeurIPS, ICML, ICLR, ACL, EMNLP, CVPR)
Company:
We're a medicine company turning science into healing to make life better for people around the world. Founded in 1876, the company is headquartered in Indianapolis, USA, with a team of 10001+ employees. The company is currently Late Stage.
What Eli Lilly and Company employees say
Pay
Benefits
Hours and flexibility
Workplace
Get the full story on Breakroom
About Eli Lilly
Sourced by ZipRecruiter
Eli Lilly, based in Indianapolis, IN, US, is one of the pioneers in the pharmaceutical industry with a rich history dating back to 1876. This global pharmaceutical company focuses on discovering, developing, manufacturing and selling pharmaceutical products in approximately 120 countries. The company's product categories include endocrinology, oncology, cardiovascular, neuroscience, and immunology. Having invested over $9 billion in research and development in the past decade, Eli Lilly is also committed to creating high-quality medicines that meet real needs. As a recipient of several awards and recognitions, Eli Lilly is known for its focus on life-saving research and drug development. Their mission is to make medicines that help people live longer, healthier, and more active lives.
Industry
Pharmaceutical product wholesalers
Company size
10,000+ Employees
Headquarters location
Indianapolis, IN, US
Year founded
1876