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Single Cell Spatial Transcriptomics Jobs in Needham, MA

RESEARCH SCIENTIST 1 , Computer Science and Artificial Intelligence Lab, will lead computational analyses of large-scale single-cell and spatial multi-omic datasets derived from human postmortem ...

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Single Cell Spatial Transcriptomics information

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How much do single cell spatial transcriptomics jobs pay per hour?

As of Jul 18, 2026, the average hourly pay for single cell spatial transcriptomics in Needham, MA is $23.58, according to ZipRecruiter salary data. Most workers in this role earn between $18.32 and $29.57 per hour, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a Single Cell Spatial Transcriptomics Scientist, and why are they important?

To thrive as a Single Cell Spatial Transcriptomics Scientist, you need a strong background in molecular biology, genomics, and bioinformatics, typically supported by an advanced degree (PhD or MSc) in a relevant field. Familiarity with high-throughput sequencing platforms, spatial transcriptomics technologies (like 10x Genomics Visium or NanoString GeoMx), and data analysis tools such as R or Python is essential. Critical thinking, problem-solving, and effective communication are crucial soft skills for interpreting complex data and collaborating in multidisciplinary teams. These skills and qualities are vital for generating reliable insights into cellular function and spatial organization, which drive innovative research and discovery.

What are some typical challenges faced by professionals working in Single Cell Spatial Transcriptomics, and how can they be addressed?

Professionals in Single Cell Spatial Transcriptomics often encounter challenges related to handling large, complex data sets and integrating spatial information with single-cell transcriptomic profiles. These tasks demand strong computational skills and close collaboration with bioinformaticians and other researchers. Effective communication within interdisciplinary teams is essential to ensure experimental design aligns with downstream analysis needs. Staying updated with rapidly evolving technologies and best practices also helps professionals overcome technical hurdles and produce reliable, high-impact results.

What is single cell spatial transcriptomics?

Single cell spatial transcriptomics is a cutting-edge technique that allows researchers to analyze gene expression in individual cells while preserving their spatial location within a tissue. This method combines the high-resolution insights of single-cell RNA sequencing with spatial information, enabling scientists to understand how cells interact and organize within their native environments. It is widely used in biomedical research to study tissue architecture, disease mechanisms, and cellular heterogeneity.
What cities near Needham, MA are hiring for Single Cell Spatial Transcriptomics jobs? Cities near Needham, MA with the most Single Cell Spatial Transcriptomics job openings:
Associate Principal Scientist, Immunology Cell Therapy Discovery

Associate Principal Scientist, Immunology Cell Therapy Discovery

AstraZeneca

Waltham, MA • On-site

Full-time

Medical, Dental, Vision, Retirement, PTO

Posted yesterday


AstraZeneca rating

8.4

Company rating: 8.4 out of 10

Based on 44 frontline employees who took The Breakroom Quiz

18th of 74 rated pharmaceutical


Job description

AI Expert, Immunology Cell Therapy Discovery

AstraZeneca, a global leader in biopharmaceuticals, is committed to discovering and delivering innovative therapies that transform patient outcomes. We are seeking a dedicated, hands-on AI expert (Associate Principal Scientist or Principal Scientist level) to join our Immunology Cell Therapy Discovery team. This role will provide scientific and technical leadership across discovery initiatives with a dual emphasis on immune mediated diseases and computational innovation, with particular focus on bioinformatics, data science, and AI architecture to accelerate cell therapy discovery.

The successful candidate will operate at the interface of immunology, computational biology, and AI-enabled research, partnering across multidisciplinary teams to advance target identification, patient stratification, translational insights, and platform capabilities that support AstraZeneca's discovery portfolio.

Key Areas of Focus

1. AI Architect

Serve as an AI Architect within the discovery organization, acting as an expert in AI-enabled coding who can design, develop, and maintain reusable codebases that improve productivity, scalability, and scientific innovation. The role will lead innovation by integrating AI into core workflows, contribute to or build AI-powered applications, and help drive transformation by advancing AI-driven discovery. This includes architecting practical AI solutions for scientific workflows, enabling automation, improving knowledge extraction, and establishing sustainable coding and software practices that enhance research efficiency and impact.

2. Bioinformatics

Lead and apply advanced bioinformatics approaches to support research in immune mediated diseases. This includes the design and implementation of robust analytical workflows for bulk and single-cell RNA sequencing, immune repertoire analysis, multi-omics integration, target and pathway identification, and biomarker or endotype discovery. The role requires strong emphasis on reproducibility, data quality, statistical rigor, and the generation of actionable biological insights that inform experimental strategy and portfolio decisions.

3. Data Science

Drive data science strategies that integrate complex biological datasets to improve understanding of disease heterogeneity, preclinical readout, and mechanism of action. The role will involve developing and applying statistical models, machine learning approaches, and advanced data integration methods to support hypothesis generation, patient segmentation, and evidence-based decision-making. The individual will also contribute to building scalable and interpretable analytical frameworks that connect computational findings with experimental validation.

Accountabilities

  • AI Architecture and Enablement: Design, develop, and maintain reusable AI-enabled codebases and computational frameworks; integrate AI into core discovery workflows; contribute to or build AI-powered applications; and advance the use of AI to improve scientific decision-making and discovery efficiency.
  • Bioinformatics and Computational Discovery: Design, implement, and continuously improve analytical workflows for bulk and single-cell transcriptomics, immune repertoire analyses, multi-omics integration, and biomarker/endotype discovery, ensuring reproducibility, quality control, and scientific rigor.
  • Data Science Innovation: Apply advanced data science and machine learning methods to derive insights from high-dimensional biological and translational datasets, supporting target selection, patient stratification, mechanism-of-action studies, and portfolio prioritization.
  • Stakeholder Engagement: Build strong partnerships with key stakeholders internally and externally to align scientific, computational, and AI strategies with broader R&D priorities; communicate complex findings clearly to both technical and non-technical audiences.

Essential Skills and Experience

  • Education and Industry Experience: PhD, MS, or BS with 5+ years of relevant biotech or biopharma industry experience in Immunology, Computational Biology, Bioinformatics, Molecular Biology, Cell Biology, Bioengineering, Data Science, Machine Learning or a related discipline.
  • AI Architecture and Software Development: Proven ability as an AI-enabled coder to design, develop, and maintain reusable codebases, contribute to or build AI-powered applications, and integrate AI solutions into scientific workflows to improve efficiency and innovation.
  • Programming Skills: Strong programming proficiency in Python and/or R, with experience in workflow reproducibility, version control, modular code development, and scalable analytical pipelines.
  • Bioinformatics Expertise: Demonstrated expertise in bulk RNA-seq, single-cell RNA-seq, immune repertoire analytics, integrative multi-omics, and biomarker/endotype discovery, with a strong understanding of analytical design, quality control, and interpretation in a discovery setting.
  • Data Science Expertise: Strong experience in statistical modeling, machine learning, data integration, and data visualization, with the ability to extract meaningful and decision-relevant insights from complex biological and translational datasets.

Desirable Skills and Experience

  • AI Application Development: Experience building internal scientific tools, decision-support systems, workflow automation tools, or other AI-powered applications that enhance research productivity and discovery quality.
  • Industry Network: Established connections within immunology, computational biology, data science, or AI communities, including experience collaborating with CROs, academic groups, or research consortia.
  • Publication Record: Strong track record of peer-reviewed publications in immunology, computational biology, bioinformatics, data science, or related fields.
  • Therapeutic Modality Breadth: Experience working across multiple therapeutic modalities, including cell therapies, biologics, and/or small molecules, and familiarity with combination strategies relevant to autoimmune and allergic indications.

The annual base pay for this position ranges from $134,892.80 - $202,339.20. Our positions offer eligibility for various incentives-an opportunity to receive short-term incentive bonuses, equity-based awards for salaried roles and commissions for sales roles.Benefits offered include qualified retirement programs, paid time off (i.e., vacation, holiday, and leaves), as well as health, dental, and vision coverage in accordance with the terms of the applicable plans.

Date Posted

24-Jun-2026

Closing Date

17-Jul-2026

Our mission is to build an inclusive environment where equal employment opportunities are available to all applicants and employees. In furtherance of that mission, we welcome and consider applications from all qualified candidates, regardless of their protected characteristics. If you have a disability or special need that requires accommodation, please complete the corresponding section in the application form.


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