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Senior Data Engineer Jobs in Rochester, MN (NOW HIRING)

Mayo Clinic

Software Engineer - Hybrid

Rochester, MN

... data security, redundancy, and support in collaboration with more senior technical staff. The ... Software Engineer responsibilities include designing, validating and implementing services aligned ...

Mayo Clinic

Software Engineer - Hybrid

Rochester, MN

... data security, redundancy, and support in collaboration with more senior technical staff. The ... Software Engineer responsibilities include designing, validating and implementing services aligned ...

Salas O'Brien

Mechanical Designer/Engineer

Rochester, MN · On-site

$74K - $100K/yr

This role is perfect for someone interested in mentoring our junior staff and move into Senior ... Our specialized experience includes design for data centers, healthcare, science and technology ...

Marvin

Senior Compensation Partner

Rochester, MN · On-site

$91K - $121K/yr

Deliver data-driven insights to support workforce planning and decision-making. Compliance ... For more than a century, we've been at the forefront of designing, building, and engineering ...

Maximus

Junior Security Engineer

Rochester, MN · On-site

The role works under senior guidance to execute defined cyber actions, maintain incident ... data. - Monitor security tools and alerts, performing initial triage and escalating issues in ...

Marvin

Senior Incentive Analyst

Rochester, MN · On-site

$91K - $121K/yr

Strong data analytics, HR software, Excel and Power BI capabilities. * Highly collaborative with ... For more than a century, we've been at the forefront of designing, building, and engineering ...

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All JobsData Engineer JobsSenior Data Engineer JobsSenior Data Engineer Jobs in Rochester, MN

Senior Data Engineer information

See Rochester, MN salary details

$82.3K

$128.4K

$177.9K

How much do senior data engineer jobs pay per year?

As of Jul 11, 2026, the average yearly pay for senior data engineer in Rochester, MN is $128,412.00, according to ZipRecruiter salary data. Most workers in this role earn between $107,700.00 and $146,400.00 per year, depending on experience, location, and employer.

What are Senior Data Engineers?

Senior Data Engineers are experienced professionals who design, build, and maintain large-scale data processing systems and infrastructure. They are responsible for developing data pipelines, managing databases, and ensuring the efficient flow and integrity of data across various platforms. Senior Data Engineers often collaborate with data scientists, analysts, and other engineers to support business intelligence and machine learning projects. They also play a key role in implementing best practices for data security, quality, and governance within an organization.

What is the difference between Senior Data Engineer vs Data Scientist?

AspectSenior Data EngineerData Scientist
Required CredentialsBachelor's/Master's in CS, Engineering, or related; experience with data pipelinesBachelor's/Master's in CS, Statistics, or related; proficiency in statistical analysis and modeling
Work EnvironmentBuild and maintain data infrastructure, optimize data workflowsAnalyze data, develop predictive models, generate insights
Employer & Industry UsageTech companies, finance, healthcare, where data engineering is essentialResearch, marketing, tech firms focusing on data analysis and modeling

While both roles work with data, Senior Data Engineers focus on developing and maintaining data infrastructure, whereas Data Scientists analyze data to generate insights and build models. They often collaborate but have distinct skill sets and responsibilities.

What are some common challenges Senior Data Engineers face when integrating data from multiple sources?

Senior Data Engineers often encounter challenges such as inconsistent data formats, varying data quality, and differing update frequencies when integrating data from multiple sources. Addressing these issues requires designing robust ETL (Extract, Transform, Load) pipelines, implementing data validation checks, and collaborating closely with source system owners to ensure data integrity. Effective communication with cross-functional teams and leveraging scalable data integration tools are also essential to streamline the process and minimize errors.

What are the key skills and qualifications needed to thrive as a Senior Data Engineer, and why are they important?

To thrive as a Senior Data Engineer, you need strong expertise in data modeling, ETL development, programming (such as Python or Scala), and a degree in computer science or a related field. Proficiency with big data technologies (like Hadoop, Spark), cloud platforms (AWS, Azure, GCP), and database systems, as well as relevant certifications, is highly valuable. Excellent problem-solving, communication, and leadership skills help you collaborate across teams and mentor junior engineers. These skills and qualities ensure robust, scalable data solutions that support organizational decision-making and growth.
What are the most commonly searched types of Data Engineer jobs in Rochester, MN? The most popular types of Data Engineer jobs in Rochester, MN are:
What are popular job titles related to Senior Data Engineer jobs in Rochester, MN? For Senior Data Engineer jobs in Rochester, MN, the most frequently searched job titles are:
What job categories do people searching Senior Data Engineer jobs in Rochester, MN look for? The top searched job categories for Senior Data Engineer jobs in Rochester, MN are:
What cities near Rochester, MN are hiring for Senior Data Engineer jobs? Cities near Rochester, MN with the most Senior Data Engineer job openings:
Senior Data Engineer jobs near you
Infographic showing various Senior Data Engineer job openings in Rochester, MN as of July 2026, with employment types broken down into 1% As Needed, 83% Full Time, 13% Part Time, and 3% Contract. Highlights an 89% Physical, 2% Hybrid, and 9% Remote job distribution, with an average salary of $128,412 per year, or $61.7 per hour.
Software Engineer - Hybrid

Software Engineer - Hybrid

Mayo Clinic

Rochester, MN

Full-time

Medical, Dental, Vision, Retirement

Posted 21 days ago

Mayo Clinic rating

7.8

Company rating: 7.8 out of 10

Based on 688 frontline employees who took The Breakroom Quiz

105th of 881 rated healthcare providers

Job description

Mayo Clinic's Research Biorepository Unit is seeking a Software Engineer to design, develop and maintain Java based applications and services supporting research laboratory workflows. This team supports the biorepository and research lab systems with grant activities, including national research biobanks for the NIH. Strong skills in Java / Java EE, Javascript, and SQL are required. The successful candidate should have experience with JBoss application server, RedHat Linux and Oracle databases. Experience with web services (SOAP/REST), Tomcat Application Server, Power Shell scripts,  Ant/Maven build frameworks, MS SQL server,  and ETL processes is desired. Provides IT support for vended and custom applications, including resolving highly complex issues, and assists with data security, redundancy, and support in collaboration with more senior technical staff. The successful candidate will have prior development experience working with diverse stakeholders and building consensus across IT teams. 

This role works closely with cross-functional teams to translate business, research, and technical requirements into robust, maintainable software solutions that meet federal regulatory guidelines. Software Engineer responsibilities include designing, validating and implementing services aligned to enterprise architecture, including APIs, data and instrument integration points, and secure interoperability layers for systems that primarily support research or specimen workflows. Ensure all appropriate documentation of processes and source code is created and maintained. Communicate effectively with peers, leaders, and customers throughout the organization. Participate in expert level troubleshooting and resolve problems through root cause analysis, data and system investigation. Work on deployment automation/configuration management with tools including but not limited to ADO and GitHub. Continue to build knowledge of the organization, processes and customers. Participate with the team in providing 24/7 call support.

Why Mayo Clinic

Mayo Clinic is top-ranked in more specialties than any other care provider according to U.S. News & World Report. As we work together to put the needs of the patient first, we are also dedicated to our employees, investing in competitive compensation and comprehensive benefit plans - to take care of you and your family, now and in the future. And with continuing education and advancement opportunities at every turn, you can build a long, successful career with Mayo Clinic.

Benefits Highlights
  • Medical: Multiple plan options.
  • Dental: Delta Dental or reimbursement account for flexible coverage.
  • Vision: Affordable plan with national network.
  • Pre-Tax Savings: HSA and FSAs for eligible expenses.
  • Retirement: Competitive retirement package to secure your future.
Just as our reputation has spread beyond our Minnesota roots, so have our locations. Today, our employees are located at our three major campuses in Phoenix/Scottsdale, Arizona, Jacksonville, Florida, Rochester, Minnesota, and at Mayo Clinic Health System campuses throughout Midwestern communities, and at our international locations. Each Mayo Clinic location is a special place where our employees thrive in both their work and personal lives. Learn more about what each unique Mayo Clinic campus has to offer, and where your best fit is. 

Equal Opportunity

All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, gender identity, sexual orientation, national origin, protected veteran status or disability status. Learn more about the "EOE is the Law".  Mayo Clinic participates in E-Verify and may provide the Social Security Administration and, if necessary, the Department of Homeland Security with information from each new employee's Form I-9 to confirm work authorization.

Bachelor's degree in Computer Science/Engineering or related field; Or an Associate's degree in Computer Science/Engineering or related field with an additional 2 years of experience as described below.

  • Have working knowledge and experience of Software Engineering with a minimum of internships and a minimum of 1 yr. of experience, or 2yrs of experience coding applications or services in a high-level language (C, C++, Golang, Java, C# etc.).
  • Demonstrated problem solving and time management skills.
  • Possesses strong technical aptitude for designing and implementing software solutions.
  • Experience with modern application development frameworks
  • Knowledge of professional software engineering practices & best practices for the full software development life cycle, including coding standards, code reviews, source control management, build processes, testing, and operations.
  • Deep hands-on technical expertise, excellent verbal and written communication skills.  

  • Experience with Agile software development techniques. 

    During the selection process you may participate in an OnDemand (pre-recorded) interview that you can complete at your convenience. During the OnDemand interview, a question will appear on your screen, and you will have time to consider each question before responding. You will have the opportunity to re-record your answer to each question - Mayo Clinic will only see the final recording. The complete interview will be reviewed by a Mayo Clinic staff member, and you will be notified of next steps.

    This vacancy is not eligible for sponsorship/we will not sponsor or transfer visas for this position.  Mayo Clinic DOES NOT participate in the F-1 STEM OPT extension program.

What Mayo Clinic employees say

Pay

Benefits

Hours and flexibility

Workplace

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About Mayo Clinic

Sourced by ZipRecruiter

Mayo Clinic is the largest integrated, not-for-profit medical group practice in the world. We're building the future, one where the best possible care is available to everyone — and more people can heal at home. Our relentless research turns into earlier diagnoses and new cures. That's how we inspire hope in those who need it most. At Mayo Clinic, experts work together to solve the most challenging unmet needs of patients. Our history of innovation dates back almost 150 years, when brothers Will and Charlie Mayo pioneered an integrated, team-based approach to medicine. Today, that trailblazing spirit drives innovations like Mayo Clinic Platform — which powers new technologies to change how care is delivered to all.

Industry

Hospitals

Company size

10,000+ Employees

Headquarters location

Rochester, MN, US

Year founded

1919

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