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Remote Navy Software Engineer Jobs in Eugene, OR

Remote micro1 is engaging Computational Biology & Cheminformatics Experts to contribute their expertise to a customer's computational drug discovery project. In this role, you'll apply your expertise ...

Remote Navy Software Engineer information

See Eugene, OR salary details

$63.8K

$148.2K

$206.4K

How much do remote navy software engineer jobs pay per year?

As of Aug 18, 2026, the average yearly pay for remote navy software engineer in Eugene, OR is $148,160.00, according to ZipRecruiter salary data. Most workers in this role earn between $120,500.00 and $173,700.00 per year, depending on experience, location, and employer.

What does a remote Navy software engineer do?

A Remote Navy Software Engineer designs, develops, tests, and maintains software systems that support various Navy operations and missions. They may work on applications for ship navigation, defense systems, data analysis, or communication tools, ensuring these systems are secure and reliable. Although the position is remote, engineers collaborate with other team members and stakeholders using digital communication tools. Security and confidentiality are crucial due to the sensitive nature of Navy projects.

What are the key skills and qualifications needed to thrive as a remote Navy software engineer, and why are they important?

To thrive as a Remote Navy Software Engineer, you need a strong background in computer science or engineering, proficiency in programming languages like C++, Java, or Python, and typically a security clearance. Familiarity with military software systems, version control tools (such as Git), and compliance standards like DoD cybersecurity protocols is essential. Excellent problem-solving, communication, and teamwork skills are crucial for collaborating remotely and addressing complex defense challenges. These skills ensure secure, reliable software solutions that meet stringent military requirements and support mission-critical operations.

How does a remote Navy software engineer typically collaborate with on-site teams and stakeholders?

As a Remote Navy Software Engineer, you’ll frequently coordinate with on-site technical teams, project managers, and military stakeholders using secure communication channels and collaboration tools. You can expect to attend regular virtual meetings, review technical documentation, and participate in secure code repositories. Effective remote communication and familiarity with Navy-specific protocols are essential to ensure that software solutions meet stringent security and operational requirements. Building strong relationships with on-site counterparts helps streamline troubleshooting and deployment processes.

Can a remote navy software engineer work remotely?

A remote Navy software engineer can work remotely if their role involves software development, coding, and system design that do not require physical presence. Many government and defense contractors offer remote positions, but security clearances and compliance with military protocols are often necessary. The ability to work remotely depends on the specific project requirements and employer policies.

What are the most commonly searched types of Navy Software Engineer jobs in Eugene, OR?

The most popular types of Navy Software Engineer jobs in Eugene, OR are:

What cities near Eugene, OR are hiring for Remote Navy Software Engineer jobs?

Cities near Eugene, OR with the most Remote Navy Software Engineer job openings:

Infographic showing various Remote Navy Software Engineer job openings in Eugene, OR as of August 2026, with employment types broken down into 33% Full Time, 33% Part Time, and 34% Contract. Highlights an 100% Remote job distribution, with an average salary of $148,160 per year, or $71.2 per hour.

Bioinformatics Software Engineer

micro1 AI

Eugene, OR • Remote

$80 - $110/hr

Part-time

Posted 15 days ago


Job description

Role Title: Computational Biology & Cheminformatics Expert


Role Type: Contractor


Location: Remote


micro1 is engaging Computational Biology & Cheminformatics Experts to contribute their expertise to a customer’s computational drug discovery project. In this role, you'll apply your expertise to help train next-generation AI systems. Your work will shape how models learn, reason, and perform through high-quality, real-world input. No prior experience in AI is required — your domain knowledge is what matters.


Scope of Work

  1. Analyze and interpret small-molecule and drug discovery datasets using advanced computational biology, bioinformatics, and cheminformatics methods.
  2. Curate, annotate, and validate chemical and biological datasets (e.g., ChEMBL, PubChem, DrugBank) to support AI-driven discovery platforms.
  3. Evaluate compound-target interactions, ADMET properties, and lead optimization strategies by integrating chemical, biological, and clinical data sources.
  4. Provide expert insights on structure-activity and structure-property relationships (SAR/SPR), medicinal chemistry approaches, and experimental design considerations.
  5. Build and implement code-based benchmark tasks (e.g., terminal/CLI-based environments) that reflect realistic computational drug discovery scenarios.
  6. Develop reproducible environments (e.g., using Docker) and automated testing pipelines to ensure task correctness and solvability.
  7. Assess and review AI-generated outputs for scientific rigor, accuracy, and practical relevance, delivering detailed written feedback and recommendations.


Preferred Qualifications

  1. Advanced expertise in Computational Biology, Cheminformatics, Medicinal Chemistry, Biochemistry, or related fields; advanced degree (PhD, MSc, PharmD) highly valued but not strictly required.
  2. Strong coding proficiency in Python (beyond analysis scripts), with hands-on experience building tools, pipelines, or testable code; familiarity with Git, GitHub, and Docker.
  3. Extensive experience with cheminformatics toolkits and platforms such as RDKit, KNIME, Schrödinger, OpenEye, or MOE.
  4. Proven track record in small-molecule drug discovery, SAR/QSAR evaluation, ADMET prediction, or virtual screening workflows.
  5. Comfort working with public chemical and bioactivity databases and integrating diverse datasets for scientific analysis.
  6. Demonstrated ability to clearly communicate complex chemical and biological concepts in written feedback and reports.
  7. Experience participating in multidisciplinary and/or remote projects; familiarity with AI-assisted coding tools is a plus.