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Python Bioinformatics Jobs in California (NOW HIRING)

ChromoLogic

Senior Scientist, Bioinformatics

Monrovia, CA · On-site

$90K - $120K/yr

We are seeking an innovative and highly motivated Senior Scientist, Bioinformatics to lead the ... Strong proficiency in Python, R, or similar programming languages * Experience applying machine ...

BeiGene USA

Senior Scientist, Bioinformatics

San Carlos, CA

  • Medical

  • Dental

  • Vision

  • Life

  • Retirement

  • PTO

... Python, Perl, Java). * Skilled in working with Linux systems and server/cloud computing ... D. in Bioinformatics, Computational Biology, or other related fields with at least 2 years of ...

EdenRoc Sciences

Bioinformatics Scientist

Scotts Valley, CA · On-site

  • Medical

  • Dental

  • Vision

  • Life

  • Retirement

  • PTO

Expertise in Python programming and demonstrated ability to learn and adopt bioinformatics techniques and resources. * Experience developing within a Linux-based cloud-computing environment (AWS ...

ChromoLogic

Senior Scientist, Bioinformatics

Monrovia, CA · On-site

$90K - $120K/yr

We are seeking an innovative and highly motivated Senior Scientist, Bioinformatics to lead the ... Strong proficiency in Python, R, or similar programming languages * Experience applying machine ...

EdenRoc Sciences

Bioinformatics Scientist

Scotts Valley, CA

  • Medical

  • Dental

  • Vision

  • Life

  • Retirement

  • PTO

Expertise in Python programming and demonstrated ability to learn and adopt bioinformatics techniques and resources. * Experience developing within a Linux-based cloud-computing environment (AWS ...

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How much do python bioinformatics jobs pay per hour?

As of Aug 14, 2026, the average hourly pay for python bioinformatics in California is $57.85, according to ZipRecruiter salary data. Most workers in this role earn between $47.69 and $65.72 per hour, depending on experience, location, and employer.

What is a Python bioinformatics?

A Python Bioinformatics job involves using Python programming to analyze and interpret biological data, such as DNA sequences, protein structures, and genomic information. Professionals in this role develop algorithms, write scripts, and use bioinformatics libraries like Biopython to process large datasets efficiently. They often work in research institutions, pharmaceutical companies, or healthcare organizations to support scientific discoveries and advancements in medicine. Strong skills in Python, data analysis, and computational biology are essential for success in this field.

What does a Python bioinformatics do?

A typical workday for a Python Bioinformatics professional often involves developing and maintaining data analysis pipelines, processing large biological datasets, and interpreting results in collaboration with biologists and other researchers. You'll spend substantial time writing scripts, troubleshooting code, and integrating different bioinformatics tools to address specific research questions. Team meetings and presentations are common, as the role requires frequent interaction with cross-functional colleagues. This dynamic environment offers the opportunity to stay engaged with new technologies and make meaningful contributions to scientific discovery.

What skills and qualifications are needed for a Python bioinformatics?

To thrive as a Python Bioinformatics professional, you need a strong foundation in biological sciences, proficiency in Python programming, and experience analyzing complex biological datasets. Familiarity with bioinformatics tools such as Biopython, BEDtools, and databases like NCBI, as well as knowledge of cloud computing platforms and relevant certifications, is commonly expected. Strong problem-solving abilities, attention to detail, and effective communication skills help you collaborate with interdisciplinary teams. These competencies are vital for interpreting biological data accurately, developing reliable pipelines, and advancing research objectives.

What are popular job titles related to Python Bioinformatics jobs in California?

For Python Bioinformatics jobs in California, the most frequently searched job titles are:

What job categories do people searching Python Bioinformatics jobs in California look for?

The top searched job categories for Python Bioinformatics jobs in California are:

What cities in California are hiring for Python Bioinformatics jobs?

Cities in California with the most Python Bioinformatics job openings:

Python Bioinformatics jobs near you
Infographic showing various Python Bioinformatics job openings in California as of August 2026, with employment types broken down into 2% Internship, 85% Full Time, 5% Part Time, 2% Temporary, and 6% Contract. Highlights an 80% Physical, 6% Hybrid, and 14% Remote job distribution, with an average salary of $120,336 per year, or $57.9 per hour.

Staff Scientist, Bioinformatics

Thermo Fisher Scientific

South San Francisco, CA • On-site

$129K - $165K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Re-posted 17 days ago

Thermo Fisher Scientific rating

7.7

Company rating: 7.7 out of 10

Based on 425 frontline employees who took The Breakroom Quiz

199th of 539 rated manufacturers

Job description

Work Schedule
Standard (Mon-Fri)
Environmental Conditions
Office
Job Description
As part of the Thermo Fisher Scientific team, you'll discover meaningful work that makes a positive impact on a global scale. Join our colleagues in bringing our Mission to life every single day to enable our customers to make the world healthier, cleaner and safer. We provide our global teams with the resources needed to achieve individual career goals while helping to take science a step beyond by developing solutions for some of the world's toughest challenges, like protecting the environment, making sure our food is safe or helping find cures for cancer.
Discover Impactful Work
You'll help develop advanced NGS workflows and bioinformatics solutions. You will contribute to developing fully automated, sample-to-report NGS workflows for both clinical and research applications, with a focus on oncology. Working with cross-functional teams of algorithm developers, software engineers, molecular biologists, and product managers, you will help advance genomic analysis and precision medicine.
Location
This is a fully onsite position based in South San Francisco, CA or Pleasanton, CA site. Relocation assistance is not available for this role.
A Day in the Life
  • Design, develop, and optimize bioinformatics pipelines supporting next-generation sequencing (NGS) workflows for oncology and other clinical and research applications
  • Develop automation tools and scalable software solutions to streamline genomic data processing and analysis
  • Collaborate with cross-functional teams, including software engineers, algorithm developers, molecular biologists, and product managers, to deliver integrated sample-to-report solutions
  • Validate bioinformatics algorithms and workflows while ensuring compliance with quality and regulatory standards
  • Translate customer and scientific requirements into technical specifications and software requirements
  • Support product development through data analysis, troubleshooting, testing, and documentation
  • Maintain clear technical documentation and contribute to continuous process improvement initiatives

Keys to Success
Education
  • Bachelor's degree in Bioinformatics, Computational Biology, Biomedical Engineering, or related biological field with 8+ years of experience in bioinformatics, with focus on NGS applications and oncology; OR Advanced Degree with 6+ years of experience

Experience
  • Experience developing bioinformatics pipelines and genomic analysis workflows in regulated environments
  • Proficiency with common bioinformatics tools and algorithms for NGS analysis
  • Experience with variant calling, sequence alignment, and functional annotation
  • Strong programming skills in Python, Perl, and shell scripting
  • Expertise working in Linux/Unix environments and relational databases
  • Experience with testing and documentation in regulated environments
  • Experience supporting cross-functional software or product development teams
  • Experience with cloud platforms (AWS) and containerization technologies

Knowledge, Skills, and Abilities
  • Knowledge of statistical analysis and machine learning techniques
  • Familiarity with Java programming is desired
  • Demonstrated project coordination and cross-functional team collaboration
  • Clear written and verbal communication skills
  • Detail-oriented with ability to adapt to team standards
  • Understanding of clinical and regulatory requirements for diagnostic applications
  • Knowledge of software development best practices and version control systems
  • Strong analytical and problem-solving abilities

Other
  • Must be legally authorized to work in the United States without sponsorship now or in the future
  • Must be able to pass a comprehensive background check and drug scre

Compensation and Benefits
The salary range estimated for this position based in California is $129,400.00-$165,000.00.
This position may also be eligible to receive a variable annual bonus based on company, team, and/or individual performance results in accordance with company policy. We offer a comprehensive Total Rewards package that our U.S. colleagues and their families can count on, which includes:
  • A choice of national medical and dental plans, and a national vision plan, including health incentive programs
  • Employee assistance and family support programs, including commuter benefits and tuition reimbursement
  • At least 120 hours paid time off (PTO), 10 paid holidays annually, paid parental leave (3 weeks for bonding and 8 weeks for caregiver leave), accident and life insurance, and short- and long-term disability in accordance with company policy
  • Retirement and savings programs, such as our competitive 401(k) U.S. retirement savings plan
  • Employees' Stock Purchase Plan (ESPP) offers eligible colleagues the opportunity to purchase company stock at a discount

For more information on our benefits, please visit: https://jobs.thermofisher.com/global/en/total-rewards

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