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Python Bioinformatics Jobs in California (NOW HIRING)

Proficient in Python, with bonus points for experience in other programming languages. * First-hand experience working with bioinformatics tools, databases, and file formats used in sequence analysis.

Associate Scientist - Bioinformatics V / Bioinformatics Engineer Location: Foster City, CA Duration ... skills (Python and/or Bash) in Linux; solid software engineering practices (Git, testing ...

Coding fluency such as Python or R * Experience with bioinformatics tools including bcftools, samtools, bedtools, etc. * Ability to implement new tools and evaluate open source tools quickly

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How much do python bioinformatics jobs pay per hour?

As of Jun 10, 2026, the average hourly pay for python bioinformatics in California is $57.85, according to ZipRecruiter salary data. Most workers in this role earn between $47.69 and $65.72 per hour, depending on experience, location, and employer.

What is a Python Bioinformatics job?

A Python Bioinformatics job involves using Python programming to analyze and interpret biological data, such as DNA sequences, protein structures, and genomic information. Professionals in this role develop algorithms, write scripts, and use bioinformatics libraries like Biopython to process large datasets efficiently. They often work in research institutions, pharmaceutical companies, or healthcare organizations to support scientific discoveries and advancements in medicine. Strong skills in Python, data analysis, and computational biology are essential for success in this field.

What does a typical workday look like for a Python Bioinformatics professional?

A typical workday for a Python Bioinformatics professional often involves developing and maintaining data analysis pipelines, processing large biological datasets, and interpreting results in collaboration with biologists and other researchers. You'll spend substantial time writing scripts, troubleshooting code, and integrating different bioinformatics tools to address specific research questions. Team meetings and presentations are common, as the role requires frequent interaction with cross-functional colleagues. This dynamic environment offers the opportunity to stay engaged with new technologies and make meaningful contributions to scientific discovery.

What are the key skills and qualifications needed to thrive in the Python Bioinformatics position, and why are they important?

To thrive as a Python Bioinformatics professional, you need a strong foundation in biological sciences, proficiency in Python programming, and experience analyzing complex biological datasets. Familiarity with bioinformatics tools such as Biopython, BEDtools, and databases like NCBI, as well as knowledge of cloud computing platforms and relevant certifications, is commonly expected. Strong problem-solving abilities, attention to detail, and effective communication skills help you collaborate with interdisciplinary teams. These competencies are vital for interpreting biological data accurately, developing reliable pipelines, and advancing research objectives.

What job categories do people searching Python Bioinformatics jobs in California look for? The top searched job categories for Python Bioinformatics jobs in California are:
What cities in California are hiring for Python Bioinformatics jobs? Cities in California with the most Python Bioinformatics job openings:
Bioinformatics Associate I

$75K - $95K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 14 days ago


Job description

Job Summary:

 

Zymo Research is seeking a highly motivated individual to join our Bioinformatics team! The successful candidate will play a key role in microbiome data analysis and in developing tools, pipelines and databases related to microbiome applications. The candidate will perform regular analyses of different bioinformatics pipelines, address bioinformatics support needs for sequencing service customers, and collaborate closely with other colleagues in developing microbiome/metagenomics applications.

As part of the Bioinformatics team, you will leverage your skills and familiarity with NGS-based cutting-edge data science methods in data collection, analysis and statistical modeling for exciting research and application projects! 

Join us in making a meaningful impact!

Essential Duties and Responsibilities

 

  • Perform bioinformatics research and development under the guidance of bioinformatics scientist in developing new microbiome pipelines or applications. Typical tasks include algorithm selection and optimization, database curation, AI function integration, report design, report scripting, and portal development.
  • Run bioinformatics pipelines or analyses and deliver reports to internal and external users. Provide support or training for report interpretation. Perform custom analyses with existing pipelines to fit different application needs. 
  • QC bioinformatics analysis results and troubleshoot closely with colleagues working in the wet-lab.
  • Optimize existing pipelines to automate the workflow, reduce computational burden, shorten runtime, improve QC criteria, improve report graphics and UI, etc.
  • Stay current with the latest advancements in bioinformatics, machine learning, and multiomics technologies.
  • Employ best practices for source control, statistical accuracy, documentation, and reproducibility.

Education and Experience:

 

  • Holds a master's or bachelor's degree in Bioinformatics or a related discipline. Bioinformatics or metagenomics data analysis experience may substitute for education.
  • Must have experience and passion in the field of bioinformatics, metagenomics, microbiomics and NGS data analysis.
  • Must have experience with Linux/Unix operating systems and running/scripting applications from the command line.
  • Proficient with scripting languages including Python, Perl and R. Experience with data visualization tools and techniques.
  • Experience with HPC environments (SLURM) and/or Amazon Web Services EC2 and S3 is a plus.
  • Experience with AI assistant or vibe coding is a plus.
  • Demonstrable best practices for code documentation and revision control.
  • Demonstrate clear verbal & written communication skills.
  • Well-developed people skills are highly desirable.


About Us:

 

Since its inception in 1994, Zymo Research has been proudly serving the scientific community by providing innovative, reliable, and high-quality research tools and products. Whether it's DNA, RNA, epigenetics, microbiomics, protein, or yeast-based research, our philosophy remains the same: To provide the highest quality products in the industry while ensuring they are both simple to use and reliable in their performance.

Recognized as a Top Workplace by the Orange County Register in 2021, 2022, and named a Top Workplace USA in 2023, Zymo Research continues to be a vibrant community where employees thrive, feel connected, and are inspired by their work. If you are passionate about contributing to scientific advancement and want to be part of an exceptional team in a dynamic, growing company, we'd love to hear from you!

 

Compensation, Benefits, and Perks:                                 

The estimated base compensation range for this position is $75,000 - $95,000 a year at the time of posting. Actual compensation details will be provided in writing at the time of offer, if applicable, and is based on several factors we believe fairly and accurately impact compensation, including geographic location, experience, knowledge, skills, abilities, and other job permitted factors.

Zymo Research also offers competitive benefits and perks including:

  • Medical, Dental, Vision, and Life Insurance Coverages
  • EAP Sessions
  • Vacation Time plus Company Holidays
  • Paid Sick Leave
  • Generous 401(K) with matching 
  • Employee Referral Bonus
  • Complimentary fruit, snacks, and beverages
  • Complimentary catered lunches on Thursdays 
  • Complimentary EV Charging 


Equal Employment Opportunity Employer:

Zymo Research welcomes candidates of all backgrounds. These include sex, age, color, race, religion, marital status, national origin, ancestry, sexual orientation, gender, gender identity, gender expression, physical & mental disability, medical condition, genetic information, military and veteran status, or any other protected status as defined by federal, state, or local law.

 

Location:

OnSite - Zymo Research Headquarters, 17062 Murphy Ave. Irvine, CA 92612

Disclaimer: At Zymo, we take the integrity of our hiring process seriously. Please be aware of fraudulent recruitment activities that may use our name to deceive job seekers. We will never ask for payment, sensitive personal information, or financial details during the recruitment process.

All legitimate communications will come from an official Zymo or TriNet Hiring email address. If you are contacted by anyone claiming to represent us using a free email service (e.g., Gmail, Yahoo, Hotmail) or asking for payment, please treat this as fraudulent and report it immediately to jobs@zymoresearch.com