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Python Bioinformatics Jobs in California (NOW HIRING)

GATC Health

Bioinformatics Analyst - UT

Emeryville, CA · On-site

... in scripting (Python or similar) and interpreted languages (R, etc) • Demonstrated ability to ... and bioinformatics innovation Company : GATC Health uses AI to speed drug discovery, predict ...

New

Caltech

Bioinformatics Support Specialist

Pasadena, CA · On-site

Bioinformatic Analyses * Learn and apply state-of-the-art statistical and computational methods for ... Python, R, and Bash required. * Familiarity with basic molecular biology topics. * Experience ...

GATC Health

Bioinformatics Analyst - CA

Irvine, CA

Experience in programming in scripting (Python or similar) and interpreted languages (R, etc ... Computational biology and bioinformatics innovation. Why Join Us: • Opportunity to work at the ...

Arcus Biosciences

Bioinformatics Engineer

Hayward, CA · On-site

$120K - $155K/yr

Proficiency in R and/or Python for bioinformatics pipelines and analysis. * Experience with a workflow language such as Snakemake or Nextflow. * Adept at building reproducible computing environments ...

ACL Digital

Bioinformatics Engineer

Foster City, CA

$70 - $80/hr

Bioinformatics Engineer -- T2T Genome Assembly (Non model Organisms) Location: Foster City, CA ... skills (Python and/or Bash) in Linux; solid software engineering practices (Git, testing ...

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How much do python bioinformatics jobs pay per hour?

As of Jun 10, 2026, the average hourly pay for python bioinformatics in California is $57.85, according to ZipRecruiter salary data. Most workers in this role earn between $47.69 and $65.72 per hour, depending on experience, location, and employer.

What is a Python Bioinformatics job?

A Python Bioinformatics job involves using Python programming to analyze and interpret biological data, such as DNA sequences, protein structures, and genomic information. Professionals in this role develop algorithms, write scripts, and use bioinformatics libraries like Biopython to process large datasets efficiently. They often work in research institutions, pharmaceutical companies, or healthcare organizations to support scientific discoveries and advancements in medicine. Strong skills in Python, data analysis, and computational biology are essential for success in this field.

Is AI going to replace bioinformatics?

AI is a tool that complements bioinformatics by automating data analysis and pattern recognition, but it is unlikely to fully replace bioinformatics professionals. Bioinformatics roles require domain expertise, interpretation skills, and understanding of biological context that AI cannot fully replicate. Professionals in this field should focus on developing skills in programming, data analysis, and machine learning to stay relevant as AI advances.

What does a typical workday look like for a Python Bioinformatics professional?

A typical workday for a Python Bioinformatics professional often involves developing and maintaining data analysis pipelines, processing large biological datasets, and interpreting results in collaboration with biologists and other researchers. You'll spend substantial time writing scripts, troubleshooting code, and integrating different bioinformatics tools to address specific research questions. Team meetings and presentations are common, as the role requires frequent interaction with cross-functional colleagues. This dynamic environment offers the opportunity to stay engaged with new technologies and make meaningful contributions to scientific discovery.

Is Python enough for bioinformatics?

Python is a widely used programming language in bioinformatics due to its versatility and extensive libraries like Biopython. However, bioinformatics often requires knowledge of other tools, scripting languages, and data analysis techniques to handle complex datasets effectively.

Is Python required for bioinformatics?

Python is widely used in bioinformatics roles because of its simplicity and extensive libraries for data analysis, scripting, and automation. Many bioinformatics jobs require proficiency in Python, along with knowledge of related tools like R or command-line interfaces, to analyze biological data effectively.

What are the key skills and qualifications needed to thrive in the Python Bioinformatics position, and why are they important?

To thrive as a Python Bioinformatics professional, you need a strong foundation in biological sciences, proficiency in Python programming, and experience analyzing complex biological datasets. Familiarity with bioinformatics tools such as Biopython, BEDtools, and databases like NCBI, as well as knowledge of cloud computing platforms and relevant certifications, is commonly expected. Strong problem-solving abilities, attention to detail, and effective communication skills help you collaborate with interdisciplinary teams. These competencies are vital for interpreting biological data accurately, developing reliable pipelines, and advancing research objectives.

What is Python used for in bioinformatics?

In bioinformatics, Python is used for analyzing biological data, such as DNA, RNA, and protein sequences. It supports tasks like data processing, visualization, and automation through libraries like Biopython and Pandas, making it a popular programming language for researchers in the field.
What are popular job titles related to Python Bioinformatics jobs in California? For Python Bioinformatics jobs in California, the most frequently searched job titles are:
What job categories do people searching Python Bioinformatics jobs in California look for? The top searched job categories for Python Bioinformatics jobs in California are:
What cities in California are hiring for Python Bioinformatics jobs? Cities in California with the most Python Bioinformatics job openings:
Python Bioinformatics jobs near you
Scientist III, Bioinformatics

Scientist III, Bioinformatics

Thermo Fisher Scientific

Carlsbad, CA • On-site

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 11 days ago

Thermo Fisher Scientific rating

7.7

Company rating: 7.7 out of 10

Based on 397 frontline employees who took The Breakroom Quiz

186th of 516 rated manufacturers

Job description

Work Schedule
Standard (Mon-Fri)
Environmental Conditions
Office
Job Description
At Thermo Fisher Scientific, our mission is to enable our customers to make the world healthier, cleaner, and safer. Within the Clinical Sequencing Division, bioinformatics plays an important role in enabling precision oncology diagnostics and advancing genomic medicine.
Location/Division-Specific Information:
Carlsbad, CA, or Austin, TX. Relocation assistance is NOT provided.
*Must be legally authorized to work in the United States without sponsorship.
*Must be able to pass a comprehensive background check, which includes a drug screen.
Discover Impactful Work:
As a Scientist III, Bioinformatics, you will contribute to the development and maintenance of bioinformatics applications, data systems, and computational workflows that support next-generation sequencing (NGS) companion diagnostic (CDx) assay development.
In this role, you will collaborate with scientists, engineers, and cross-functional partners to develop tools and workflows that support genomic data analysis, assay development, and regulated diagnostic programs. Your work will help ensure that bioinformatics systems supporting diagnostic development are reliable, reproducible, and well-documented.
You will also contribute to emerging initiatives that explore the use of AI-enabled tools to enhance bioinformatics workflows, data analysis, and internal scientific applications.
This position combines bioinformatics expertise with scientific software development to support scalable genomic analysis and integration with laboratory and data management systems.
A Day in the Life:
Bioinformatics Application Development
Develop and maintain internal bioinformatics applications and computational tools to support genomic data analysis and the development of companion diagnostic assays.
Workflow and Pipeline Development
Implement and improve automated workflows for next-generation sequencing (NGS) data processing and analysis using scripting languages and workflow frameworks.
Data Systems and Integration
Support development and integration of bioinformatics workflows with data systems, databases, and laboratory information management systems (LIMS).
AI-Enabled Workflow Support
Contribute to the evaluation and integration of AI-enabled tools that enhance bioinformatics workflows, scientific data analysis, and internal research applications.
Cross-Functional Collaboration and Documentation
Work with scientists, engineers, and program teams to develop computational solutions supporting diagnostic development and document workflows to ensure reproducibility and maintainability within regulated environments.
Keys to Success
Education
Bachelor's in Bioinformatics, Computational Biology, Computer Science, Molecular Biology, or a related field required.
Experience
  • 5 years of experience in bioinformatics and NGS data analysis (Advanced degree plus 3 years of experience).
  • Experience programming in Python or a similar language.
  • Experience working in Linux or Unix environments.
  • Experience developing or supporting bioinformatics pipelines or analysis tools.
  • Familiarity with next-generation sequencing (NGS) data analysis.
  • Experience using version control systems such as Git.
  • Experience collaborating with cross-functional scientific teams.

Knowledge, Skills, and Abilities
Programming and Scientific Computing
  • Proficiency in Python or similar programming languages.
  • Experience developing scripts, tools, or applications for scientific data analysis.
  • Familiarity with software development practices such as version control and documentation.

Bioinformatics and Genomics
  • Understanding of common bioinformatics workflows and sequencing data formats.
  • Experience working with genomic datasets.

Data Systems
  • Familiarity with databases or structured data systems (e.g., SQL).
  • Experience working with large or complex scientific datasets.

Workflow and Infrastructure
  • Familiarity with workflow frameworks such as Nextflow, Snakemake, or similar tools.
  • Experience with container technologies such as Docker is helpful.
  • Exposure to cloud computing platforms such as AWS or GCP is beneficial.

AI and Emerging Technologies
  • Exposure to AI or machine learning tools used in scientific computing or data analysis is a plus.
  • Interest in applying AI-enabled tools to improve scientific workflows.

Collaboration and Communication
  • Ability to communicate technical information clearly.
  • Ability to work effectively in collaborative, multidisciplinary teams.
  • Strong problem-solving and analytical skills.

Benefits:
We offer competitive remuneration, annual incentive plan bonus, healthcare, and a range of employee benefits. Thermo Fisher Scientific offers employment with an innovative, forward-thinking organization, and outstanding career and development prospects. We offer an exciting company culture that stands for integrity, intensity, involvement, and innovation!
Compensation and Benefits
The salary range estimated for this position based in California is $95,900.00-$120,000.00.
This position may also be eligible to receive a variable annual bonus based on company, team, and/or individual performance results in accordance with company policy. We offer a comprehensive Total Rewards package that our U.S. colleagues and their families can count on, which includes:
  • A choice of national medical and dental plans, and a national vision plan, including health incentive programs
  • Employee assistance and family support programs, including commuter benefits and tuition reimbursement
  • At least 120 hours paid time off (PTO), 10 paid holidays annually, paid parental leave (3 weeks for bonding and 8 weeks for caregiver leave), accident and life insurance, and short- and long-term disability in accordance with company policy
  • Retirement and savings programs, such as our competitive 401(k) U.S. retirement savings plan
  • Employees' Stock Purchase Plan (ESPP) offers eligible colleagues the opportunity to purchase company stock at a discount

For more information on our benefits, please visit: https://jobs.thermofisher.com/global/en/total-rewards

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