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Protein Chemistry Jobs (NOW HIRING)

WI · On-site

$140 - $190/hr

You oversee the execution and interpretation of all activities within the protein chemistry team. You handle complex and scientifically challenging projects for our industrial (e.g. biotech and ...

D. in Protein Chemistry, Biochemistry, Molecular Biology, or a related field, or M.S. with 2-5 years of relevant industry experience. * Strong hands-on experience in protein purification and ...

Senior QC Analyst

Emeryville, CA · On-site

$95 - $130/hr

Routine in-process, final product (antigens) protein chemistry testing for release * Routine in-process, final product (antigens) microbiological testing for release of product * Routine testing for ...

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Protein Chemistry information

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How much do protein chemistry jobs pay per hour?

As of Aug 24, 2026, the average hourly pay for protein chemistry in the United States is $22.26, according to ZipRecruiter salary data. Most workers in this role earn between $18.27 and $24.52 per hour, depending on experience, location, and employer.

What is protein chemistry?

Protein chemistry is the branch of biochemistry that focuses on the study of proteins, including their structure, function, and interactions. It involves analyzing the physical and chemical properties of proteins, understanding how they are synthesized and degraded in cells, and exploring their roles in biological processes. Protein chemists use various techniques such as chromatography, electrophoresis, and spectroscopy to characterize proteins, which is essential for fields like drug development, biotechnology, and disease research.

What are the key skills and qualifications needed to thrive as a protein chemist?

To thrive as a Protein Chemist, you need a strong background in biochemistry, molecular biology, and analytical techniques, typically supported by at least a bachelor's or master's degree in a related field. Familiarity with chromatography, mass spectrometry, protein purification systems, and relevant software such as Prism or Bioinformatics tools is essential. Attention to detail, problem-solving ability, and effective communication are important soft skills that set candidates apart. These skills and qualifications are crucial for designing experiments, analyzing data accurately, and collaborating with interdisciplinary teams in research or pharmaceutical environments.

What are some common challenges faced by protein chemists in optimizing protein purification processes?

Protein chemists often encounter challenges such as low protein yield, maintaining protein stability, and preventing aggregation during purification. Selecting the right purification techniques and buffers is crucial, as proteins can be sensitive to changes in pH, temperature, and salt concentrations. Additionally, troubleshooting contamination or degradation issues requires a strong understanding of both the protein of interest and the available analytical methods. Collaboration with colleagues in molecular biology or biophysics can also play a key role in overcoming these challenges and optimizing protocols.

What is the difference between Protein Chemistry vs Biochemist?

AspectProtein ChemistryBiochemist
Required CredentialsBachelor's or Master's in Chemistry, Biochemistry, or related fieldsBachelor's or Master's in Biochemistry, Chemistry, or related fields
Work EnvironmentLaboratories focused on protein analysis, drug development, or structural studiesResearch labs, healthcare, or academic settings studying biological processes
Industry UsagePharmaceuticals, biotech, research institutionsHealthcare, research, academia, biotech

Protein Chemists specialize in studying protein structures, functions, and interactions, often focusing on protein purification and analysis. Biochemists have a broader scope, exploring various biological molecules and processes. While both roles require similar educational backgrounds and often work in overlapping environments, Protein Chemists focus more specifically on proteins, whereas Biochemists study a wide range of biological chemistry topics.

What does a protein chemist do?

A protein chemist studies the structure, function, and interactions of proteins using techniques like spectroscopy and chromatography. They often work in laboratories, developing experiments to understand protein behavior, and may be involved in drug development, biotechnology, or research environments.
More about Protein Chemistry jobs

What are the most commonly searched types of Protein Chemistry jobs?

The most popular types of Protein Chemistry jobs are:

What states have the most Protein Chemistry jobs?

States with the most job openings for Protein Chemistry jobs include:

Infographic showing various Protein Chemistry job openings in the United States as of August 2026, with employment types broken down into 1% As Needed, 71% Full Time, 24% Part Time, 3% Contract, and 1% Nights. Highlights an 84% Physical, 1% Hybrid, and 15% Remote job distribution, with an average salary of $46,292 per year, or $22.3 per hour.

Food /Protein Chemistry Scientist

Emeryville, CA

$135K/yr

Full-time

Medical, Dental, Vision

Posted 6 days ago


Job description

About the Role

We are looking for a Food /Protein Chemistry Scientist to help advance the science behind our food and protein platforms.

This is a highly hands-on role for someone who combines deep technical expertise in protein chemistry and food science with strong experimental judgment and practical problem-solving skills. You will design and execute studies to better understand protein structure, extraction, functionality, stability, and performance - and translate those findings into better ingredients, products, and processes.

We are looking for someone who doesn't simply execute experiments. You should be comfortable working through ambiguous technical challenges, developing hypotheses, determining what to test next, and turning complex data into clear recommendations that move the work forward.

What You'll Do

  • Design and execute systematic studies to understand and optimize protein extraction, yield, functionality, and performance.
  • Develop and optimize novel extraction and processing approaches, balancing protein functionality, food-grade requirements, scalability, and downstream processing constraints.
  • Develop and apply analytical methods to understand protein structure-function relationships and identify drivers of functional performance.
  • Apply protein chemistry, food science, and computational approaches to troubleshoot technical challenges and improve protein functionality and stability.
  • Evaluate protein performance through processing, formulation, storage, and shelf life, translating findings into actionable recommendations for product and process development.
  • Independently interpret complex or ambiguous results, develop hypotheses, and determine the most valuable next experiments.
  • Partner closely with Product Development, Process/Manufacturing, Quality, and other technical teams to translate laboratory findings into practical, scalable solutions.
  • Maintain rigorous experimental documentation and clearly communicate findings, conclusions, and recommendations to technical and non-technical stakeholders.

What We're Looking For

  • PhD in Food Science, Protein Chemistry, Biochemistry, Chemistry, or a closely related field, with a minimum of 2 years of relevant industry experience; or a Master's degree with 5+ years of relevant industry experience.
  • Strong hands-on experience with protein extraction, purification, characterization, functionality, and/or process optimization, ideally within food or food-adjacent applications.
  • Strong understanding of protein structure-function relationships and how processing conditions influence protein behavior and performance.
  • Direct experience with multiple protein characterization techniques such as differential scanning calorimetry (DSC), fluorescence spectroscopy, rheology, SDS-PAGE, or related analytical methods.
  • Demonstrated experience designing and executing multi-variable experiments using DOE, factorial designs, or other systematic optimization approaches.
  • Working knowledge of sequence- and structure-based bioinformatics tools such as BLAST, structure alignment tools, or ProtParam-type sequence analysis.
  • Strong analytical judgment and ability to synthesize complex experimental data into clear conclusions and recommendations.
  • Excellent experimental discipline, documentation, and attention to detail.
  • Ability to communicate effectively with both highly technical and non-technical audiences.
  • High degree of independence and self-direction. You are comfortable determining the next question or experiment rather than relying on a predefined protocol.

Nice to Have

  • Experience working specifically with plant, alternative, or novel proteins.
  • Experience translating laboratory findings into food applications or scalable manufacturing processes.
  • Hands-on experience with cell cultivation, fermentation, or fermentation-derived proteins.
  • Experience working across both fundamental protein science and applied food/product development.

The Total Package

We develop compensation using market data, internal benchmarks, and candidate experience to ensure fairness and competitiveness.

Compensation: The expected base salary range for this role (Emeryville, CA) is $135,000 to 158,000 - the level and respective final compensation will depend on experience and technical depth.

In addition, we offer:

  • Equity
  • Up to 100% employer-paid medical, dental, and vision coverage (up to 90% for dependents)
  • Flexible time off
  • 9 Holidays + company closure between Christmas & New Years 

Additional Information & Requirements 

  • This is a full-time regular position based onsite (5 days/week) at our headquarters in Emeryville, CA. We are prioritizing local candidates at this time.  
  • At this time, Just Food Company is unable to sponsor or transfer employment visas. Candidates must be authorized to work in the United States without current or future employer sponsorship.  
  • In compliance with federal law, all new hires must verify their identity and eligibility to work in the United States and complete the required Form I-9 upon hire. 
  • Just Food Company and its subsidiaries participate in E-Verify.Â