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Pharmaceutical Software Developer Jobs in Boston, MA

Responsibilities : โ€ข Working in a highly agile, crossโ€functional environment at the interface of software engineering, AI/ML, and pharmaceutical sciences, the role contributes to build scalable ...

Senior Data & ML Ops Engineer

Boston, MA ยท On-site

$137K - $206K/yr

... pharmaceutical data. This will be a hybrid role - in office 3 days per week/2 days per week work ... DevOps. * Experience with Git, CI/CD, containerization, and production software engineering ...

... pharmaceutical and medical device companies make smarter, faster decisions. This is a high-impact ... Strong commitment to software engineering best practices Desired Skills & Experience * Experience ...

Senior Principal AI Engineer

Boston, MA ยท On-site

$136K - $187K/yr

CI/CD pipelines and DevOps/MLOps practices * Secure software development and enterprise platform ... Experience in regulated industries such as biotechnology, pharmaceuticals, healthcare, or life ...

... pharmaceutical development, and quality assurance worldwide. Working at the intersection of ... You will work closely with Product Management, Marketing, Software, Electrical, Mechanical, Quality ...

... pharmaceutical development, and quality assurance worldwide. Working at the intersection of ... You will work closely with Product Management, Marketing, Software, Electrical, Mechanical, Quality ...

Java Developer

Boston, MA ยท On-site

$55.50 - $71.75/hr

Key Responsibilities Develop, configure, and support software solutions using Java Work closely ... We look for Science - Biotechnology, Pharmaceutical Technology, Biomedical Engineering ...

... and software development to solve high-impact industrial challenges. At Basetwo, you'll work ... The Role We're hiring a Product Engineer to work closely with pharmaceutical and chemical ...

... and software development to solve high-impact industrial challenges. At Basetwo, you'll work ... The Role We're hiring a Product Engineer to work closely with pharmaceutical and chemical ...

The Senior Software Quality Engineer position is responsible to ensure that activities throughout ... A minimum of 8 years of experience in medical devices, pharmaceuticals, diagnostic industry, or ...

Showing results 41-60

Pharmaceutical Software Developer information

See Boston, MA salary details

$52.1K

$121.5K

$180.3K

How much do pharmaceutical software developer jobs pay per year?

As of Aug 11, 2026, the average yearly pay for pharmaceutical software developer in Boston, MA is $121,509.00, according to ZipRecruiter salary data. Most workers in this role earn between $97,800.00 and $141,200.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a pharmaceutical software developer, and why are they important?

To thrive as a Pharmaceutical Software Developer, you need strong programming skills, knowledge of pharmaceutical regulations, and a relevant degree in computer science, software engineering, or a related field. Familiarity with industry-specific tools such as LIMS (Laboratory Information Management Systems), GxP compliance software, and experience with scripting languages like Python or Java are typically required. Attention to detail, problem-solving abilities, and effective communication are crucial soft skills for collaborating with cross-functional teams and ensuring software accuracy. These skills and qualities are vital for developing compliant, reliable software that supports critical pharmaceutical processes and meets regulatory standards.

What is the difference between Pharmaceutical Software Developer vs Medical Software Engineer?

AspectPharmaceutical Software DeveloperMedical Software Engineer
Required CredentialsBachelor's in Computer Science, Life Sciences, or related field; knowledge of pharmaceutical regulationsBachelor's in Computer Science, Biomedical Engineering, or related; familiarity with healthcare standards
Work EnvironmentPharmaceutical companies, biotech firms, regulated labsHospitals, healthcare tech companies, medical device firms
Employer & Industry UsagePharmaceutical industry, biotech, drug developmentHealthcare industry, medical device, clinical software
Common Search & ComparisonYesYes

Pharmaceutical Software Developers focus on creating software for drug development, clinical trials, and pharmaceutical processes, often working within regulated environments. Medical Software Engineers develop applications for patient care, medical devices, and healthcare management. While both roles require programming skills and knowledge of healthcare standards, their primary industries and applications differ.

What does a pharmaceutical software developer do?

A Pharmaceutical Software Developer designs, develops, and maintains software applications that support the pharmaceutical industry. This can include systems for drug discovery, clinical trials management, regulatory compliance, and pharmaceutical manufacturing. These professionals work closely with scientists, pharmacists, and regulatory teams to ensure the software meets industry standards and helps streamline workflows. Their work is critical in ensuring the accuracy, security, and compliance of data within pharmaceutical companies.

How does a pharmaceutical software developer typically collaborate with cross-functional teams in the drug development process?

Pharmaceutical Software Developers work closely with scientists, regulatory experts, and quality assurance teams to build and maintain software that supports research, clinical trials, and compliance. Collaboration often involves regular meetings to gather requirements, troubleshoot data integration issues, and ensure that software aligns with strict industry regulations such as FDA guidelines. Developers play a key role in translating scientific needs into robust digital solutions, making strong communication and teamwork skills essential. This collaborative environment also provides opportunities to learn from diverse disciplines and contribute directly to the success of new drug development.
What job categories do people searching Pharmaceutical Software Developer jobs in Boston, MA look for? The top searched job categories for Pharmaceutical Software Developer jobs in Boston, MA are:
Infographic showing various Pharmaceutical Software Developer job openings in Boston, MA as of August 2026, with employment types broken down into 1% Internship, 85% Full Time, 9% Part Time, and 5% Contract. Highlights an 88% Physical, 4% Hybrid, and 8% Remote job distribution, with an average salary of $121,509 per year, or $58.4 per hour.

Lead Software Platform Engineer, MLOps

TetraScience

Cambridge, MA โ€ข On-site, Remote

Full-time

Life, Retirement, PTO

Posted 7 days ago


Job description

Who We Are

TetraScience is the Scientific Data and AI Cloud company. We are catalyzing the Scientific AI revolution by designing and industrializing AI-native scientific data sets, which we bring to life in a growing suite of next gen lab data management solutions, scientific use cases, and AI-enabled outcomes.

TetraScience is the category leader in this vital new market, generating more revenue than all other companies in the aggregate. In the last year alone, the world's dominant players in compute, cloud, data, and AI infrastructure have converged on TetraScience as the de facto standard, entering into co-innovation and go-to-market partnerships.

In connection with your candidacy, you will be asked to carefully review the Tetra Way letter, authored directly by Patrick Grady, our co-founder and CEO. This letter is designed to assist you in better understanding whether TetraScience is the right fit for you from a values and ethos perspective.

It is impossible to overstate the importance of this document and you are encouraged to take it literally and reflect on whether you are aligned with our unique approach to company and team building. If you join us, you will be expected to embody its contents each day.

The Role

We're looking for a Lead Software Platform Engineer working at the intersection of distributed systems and MLOps. You will own and scale our AI and data infrastructure as a product our customers build their science on, and that every other engineering team builds against. You will architect the cloud-based services and MLOps infrastructure that enable production-grade AI/ML workflows, working closely with Applied AI engineers, data engineers, and platform teams, and you will act as the technical design authority for how models, LLMs, and agents run in production. The work spans the model and prompt lifecycle, the evaluation and observability harness, the security and tenant boundaries around prompts and retrieval, and the cost and latency controls that keep production AI economically viable at scale.

This is a highly impactful seat for an engineer who has shipped AI/ML infrastructure as a multi-tenant product rather than internal tooling. The model serving, MCP, and agent capabilities you build are consumed directly by scientists at the world's largest pharmaceutical companies, running against their own data under their compliance obligations. If that scope appeals to you, and you thrive on turning ambitious scalability and cost targets into concrete technical strategy inside a regulated environment, we'd love to talk to you.

What You Will Do
  • Own the technical architecture of the AI/ML platform: the service and API surface our customers use to run models and agents against their own scientific data, and that Applied AI and data engineering teams build against internally.
  • Own the end-to-end model and prompt lifecycle across Databricks MLflow and AWS Bedrock, including registration, versioning, asset bundles, staged promotion, rollback, and multi-model serving.
  • Design the inference substrate for both real-time and batch AI workloads, including routing, batching, caching, concurrency control, GPU and accelerator capacity planning, handling of large binary inputs such as instrument images, and graceful degradation under load.
  • Integrate AI models and large language models (LLMs) into production systems using architectures like retrieval-augmented generation (RAG), and architect the agentic layer above them: tool and function calling, MCP-based tooling, and agent runtimes, deciding what belongs in the platform versus in the applications built on top of it.
  • Design security into the AI platform rather than leaving it to the applications above it, partnering with our security team on guardrails, prompt-injection and tool-abuse defenses, PII and PHI handling, and hard tenant data boundaries across prompts, retrieval, and tool calls.
  • Build the evaluation and quality infrastructure that makes AI shippable: offline and online eval harnesses, golden datasets, regression gates in CI, A/B and shadow deployment, and drift and hallucination detection in production.
  • Establish observability for the AI platform, including monitoring, alerting, logging, and distributed tracing, and set the SLI, SLO, and SLA model for systems whose outputs are probabilistic.
  • Design for reproducibility and lineage required in a validated pharma environment, with versioned data, code, prompts, and model artifacts, and an audit trail that can withstand customer and regulatory scrutiny.
  • Contribute to the infrastructure-as-code and deployment automation for the AI platform (CloudFormation, AWS CDK), partnering with the team that owns production deployments to support multi-tenant infrastructure, online upgrades, and on-demand compute allocation.
  • Own production readiness for the AI platform with Applied AI engineers, data engineers, and platform teams: the performance, reliability, and cost-efficiency of models in production, plus incident response and runbooks.
  • Act as SME and design authority across product and engineering. Lead design reviews, write the reference architectures and technical documentation others follow, and mentor senior and mid-level engineers on distributed systems and AI engineering practice.
  • Set technical direction on emerging AI infrastructure: evaluate new frameworks, serving runtimes, model providers, and data types, and make clear build-versus-buy decisions grounded in cost, risk, and scalability.

Requirements

    • 10+ years of professional experience in software engineering and infrastructure engineering, with a proven track record of designing, building, and scaling distributed, cloud-native systems in production.
    • Demonstrated experience as a technical leader or architect, accountable for the key decisions on system design, scalability, performance, and cost optimization.
    • Experience designing security into a multi-tenant platform, including authorization boundaries between tenants and handling of sensitive data such as PII and PHI, with awareness of LLM-specific risks like prompt injection and tool abuse.
    • Extensive experience building and maintaining AI/ML infrastructure in production, including model deployment and lifecycle management, delivered as a multi-tenant product with external users rather than internal tooling for a single team. Candidates whose experience is limited to building pipelines for their own team will not be a fit.
    • Deep, hands-on experience taking LLM-based systems to production, including RAG architecture, retrieval and embedding design, prompt and model versioning, and tool or function calling. Not just prototyping with an SDK. We are looking for someone who has operated these systems under real traffic, real latency budgets, and real failure modes.
    • Expert-level coding skills in TypeScript and Python building robust APIs and backend services, with the judgment to critically evaluate AI-generated code for correctness, security, and architectural fit.
    • Production-level experience with a model registry and serving stack, ideally Databricks MLflow, including model registration, versioning, asset bundles, and serving workflows.
    • Experience treating AI evaluation as a release gate rather than post-hoc reporting, including eval harnesses, regression gates, and drift or quality monitoring for non-deterministic systems.
    • Proficiency in API-first design, including REST and OpenAPI specifications, designing APIs that are scalable, secure, versioned, and extensible.
    • Solid working knowledge of AWS and containerized workloads (e.g., Docker), and familiarity with infrastructure-as-code such as CloudFormation or CDK, with the ability to contribute to CI/CD pipelines and deployment automation.
    • Experience defining observability and SLI/SLO/SLA practice for production systems, including monitoring, alerting, and distributed tracing.
    • Ability to articulate ideas clearly to customers and cross-functional teams, influence technical direction on teams you do not manage, and mentor other engineers.
Nice to Have
    • Familiarity with emerging LLM frameworks for advanced prompt orchestration and programmatic LLM pipelines.
    • Experience running agentic or multi-step orchestration in production, and with MCP as an integration surface for tooling and non-human identities.
    • Understanding of LLM cost monitoring, latency optimization, and usage analytics in production environments, including per-tenant cost attribution for tokens, GPU, and inference.
    • Experience with multimodal model inputs, including image and instrument data, and the throughput and cost implications of serving them at scale.
    • Experience with fine-tuning, distillation, or model optimization such as quantization, batching, or KV-cache strategy, to improve latency and cost.
    • Experience delivering ML or AI systems in a regulated or validated environment (GxP, 21 CFR Part 11, SOC 2), including computer system validation and audit readiness.
    • Background in scientific, life sciences, or laboratory data domains.

Benefits

  • 100% employer-paid benefits for all eligible employees and immediate family members
  • Unlimited paid time off (PTO)
  • 401K
  • Flexible working arrangements - Remote work
  • Company paid Life Insurance, LTD/STD
  • A culture of continuous improvement where you can grow your career and get coaching
  • The salary range for this position is $200K-$270K USD. The salary range posted reflects our target baseline for this role. Final compensation is determined by a thorough evaluation of factors including the candidate's specific experience, localized market data, and internal team equity.

We are not currently providing visa sponsorship for this position.