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Pharmaceutical Software Developer Jobs in Boston, MA

Beghou Consulting

Data Engineer

Boston, MA

$124K - $149K/yr

Implement software engineering best practices, including CI/CD, version control, automated testing ... Experience in the life sciences, healthcare, or pharmaceutical industry. The wage range for this ...

Moderna Therapeutics

Senior AI Engineer

Cambridge, MA · On-site

$145.90 - $234.20/hr

Build and review critical software components, APIs, orchestration patterns, model‑serving ... Improve platform reliability, performance, cost efficiency, data quality, and developer experience ...

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All JobsPharmaceutical Software Developer JobsPharmaceutical Software Developer Jobs in Boston, MA

Pharmaceutical Software Developer information

See Boston, MA salary details

$52.1K

$121.5K

$180.3K

How much do pharmaceutical software developer jobs pay per year?

As of Aug 11, 2026, the average yearly pay for pharmaceutical software developer in Boston, MA is $121,509.00, according to ZipRecruiter salary data. Most workers in this role earn between $97,800.00 and $141,200.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a pharmaceutical software developer, and why are they important?

To thrive as a Pharmaceutical Software Developer, you need strong programming skills, knowledge of pharmaceutical regulations, and a relevant degree in computer science, software engineering, or a related field. Familiarity with industry-specific tools such as LIMS (Laboratory Information Management Systems), GxP compliance software, and experience with scripting languages like Python or Java are typically required. Attention to detail, problem-solving abilities, and effective communication are crucial soft skills for collaborating with cross-functional teams and ensuring software accuracy. These skills and qualities are vital for developing compliant, reliable software that supports critical pharmaceutical processes and meets regulatory standards.

What is the difference between Pharmaceutical Software Developer vs Medical Software Engineer?

AspectPharmaceutical Software DeveloperMedical Software Engineer
Required CredentialsBachelor's in Computer Science, Life Sciences, or related field; knowledge of pharmaceutical regulationsBachelor's in Computer Science, Biomedical Engineering, or related; familiarity with healthcare standards
Work EnvironmentPharmaceutical companies, biotech firms, regulated labsHospitals, healthcare tech companies, medical device firms
Employer & Industry UsagePharmaceutical industry, biotech, drug developmentHealthcare industry, medical device, clinical software
Common Search & ComparisonYesYes

Pharmaceutical Software Developers focus on creating software for drug development, clinical trials, and pharmaceutical processes, often working within regulated environments. Medical Software Engineers develop applications for patient care, medical devices, and healthcare management. While both roles require programming skills and knowledge of healthcare standards, their primary industries and applications differ.

What does a pharmaceutical software developer do?

A Pharmaceutical Software Developer designs, develops, and maintains software applications that support the pharmaceutical industry. This can include systems for drug discovery, clinical trials management, regulatory compliance, and pharmaceutical manufacturing. These professionals work closely with scientists, pharmacists, and regulatory teams to ensure the software meets industry standards and helps streamline workflows. Their work is critical in ensuring the accuracy, security, and compliance of data within pharmaceutical companies.

How does a pharmaceutical software developer typically collaborate with cross-functional teams in the drug development process?

Pharmaceutical Software Developers work closely with scientists, regulatory experts, and quality assurance teams to build and maintain software that supports research, clinical trials, and compliance. Collaboration often involves regular meetings to gather requirements, troubleshoot data integration issues, and ensure that software aligns with strict industry regulations such as FDA guidelines. Developers play a key role in translating scientific needs into robust digital solutions, making strong communication and teamwork skills essential. This collaborative environment also provides opportunities to learn from diverse disciplines and contribute directly to the success of new drug development.
What are popular job titles related to Pharmaceutical Software Developer jobs in Boston, MA? For Pharmaceutical Software Developer jobs in Boston, MA, the most frequently searched job titles are:
What job categories do people searching Pharmaceutical Software Developer jobs in Boston, MA look for? The top searched job categories for Pharmaceutical Software Developer jobs in Boston, MA are:
Pharmaceutical Software Developer jobs near you
Infographic showing various Pharmaceutical Software Developer job openings in Boston, MA as of August 2026, with employment types broken down into 1% Internship, 85% Full Time, 9% Part Time, and 5% Contract. Highlights an 88% Physical, 4% Hybrid, and 8% Remote job distribution, with an average salary of $121,509 per year, or $58.4 per hour.

Senior Software Engineer, Slicer

Johnson Controls

Burlington, MA • On-site

$100K - $135K/yr

Full-time

Re-posted 16 days ago

Johnson Controls rating

8.0

Company rating: 8.0 out of 10

Based on 407 frontline employees who took The Breakroom Quiz

136th of 538 rated manufacturers

Job description

About Johnson Controls

Johnson Controls,a global leader in thermal management, mission-critical building systems, energy efficiency, and decarbonization, helps customers use energy more productively, reduce carbon emissions, and operate with the precision and resilience required in rapidly expanding industries such as datacenters, healthcare, pharmaceuticals, advanced manufacturing, and higher education.

For more than 140 years, Johnson Controls has delivered performance where itreally matters. Backed by advanced technology, lifecycle services and an industry-leading field organization, weelevatecustomer performance,turn goals into real-world results andhelpmove society forward.

Visitjohnsoncontrols.comfor more information and follow @Johnsoncontrols on socialplatforms.

What you'll do

Thermal constraints limit AI infrastructure, semiconductor equipment, power electronics, and defense systems. JCI removes those constraints. Enabled by the Stack Forging process, JCI produces high-performance thermal components and cooling loop solutions - purpose-built for direct integration into AI, HPC, and mission-critical systems. JCI has built the industry's leading thermal management platform for the applications that demand it most.

As a Senior Software Engineer, Slicer, you'll work with an interdisciplinary team to design and implement software for JCI's Stack Forging process throughout its lifecycle. You will work to define, design, develop, implement, and maintain JCI's Stack Forging software suite. Your end-users are in the building, and there are many opportunities for rich collaboration.

This position is based onsite at our facility in Burlington, MA. Candidates must be commuting distance to the facility, or able to relocate. Various relocation packages are available.

How you will do it

  • Co-design a software suite that runs end-to-end workflows for JCI's novel Stack Forging manufacturing process.

  • Develop 3D algorithms to improve part accuracy and simplify support removal

  • Take products and features from requirements definition to proof-of-concept prototypes to production code

  • Develop 2D motion and path planning algorithms to improve the throughput of JCI's Stack Forging manufacturing equipment

  • Collaborate in the team's agile development process

  • Provide feedback and improve the team's code quality

  • Work with external designers and developers as needed

What you will need
Required

  • Able to balance long-term strategic thinking with short-term focus on details

  • 2+ years of experience with computational geometry or an adjacent field (i.e. CAD, Simulation, Graphics, CAM, etc.)

  • Experience in C++: object oriented design and development, design patterns, and other software development methodologies

  • Bachelor's degree in Computer Science, Computer Engineering, Mathematics, or Physics

  • 5+ years of industry experience building, testing, and shipping high-quality production code

  • Experience developing in an agile production code environment

Preferred

  • Comfort in a fast-paced environment with a bias towards action

  • Comfortable developing for both back-end and front-end applications, and preferably worked with embedded Linux environments

  • Experience in architecting software systems, considering customer workflow, and process dataflow

  • Have broad applications experience and have shipped production code

  • Worked in a relevant field such as additive manufacturing, industrial inspection, 3D CAD tools, motion planning, or control

Export Control Requirement:This position may require access to information, technology, technical data, software, or other items subject to U.S. export control laws and regulations. Any offer of employment for this position may be contingent upon the candidate's ability to obtain and maintain any required export authorization or eligibility to access controlled items.

HIRING SALARY RANGE: $100,000 - $135,000 (Salary to be determined by the education, experience,knowledge, skills, and abilities of the applicant, internal equity, and alignment with marketdata.) This role offers a competitive Bonus plan that will take into account individual, group,and corporate performance. This position includes a competitive benefits package. Theposted salary range reflects the target compensation for this role. However, we recognizethat exceptional candidates may bring unique skills and experiences that exceed the typicalprofile. If you believe your background warrants consideration beyond the stated range, weencourage you to apply. To support an efficient and fair hiring process, we may usetechnology assisted tools, including artificial intelligence (AI), to help identify and evaluatecandidates. All hiring decisions are ultimately made by human reviewers. For details, pleasevisit the About Us tab on the Johnson Controls Careers site athttps://jobs.johnsoncontrols.com/about-usJCI is an Equal Opportunity Employer and does not discriminate on the basis of any protected categories.

Johnson Controls International plc. is an equal employment opportunity and affirmative action employer and all qualified applicants will receive consideration for employment without regard to race, color, religion, sex, national origin, age, protected veteran status, genetic information, sexual orientation, gender identity, status as a qualified individual with a disability or any other characteristic protected by law. To view more information about your equal opportunity and non-discrimination rights as a candidate, visit EEO is the Law. If you are an individual with a disability and you require an accommodation during the application process, please visit here.

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About Johnson Controls

Sourced by ZipRecruiter

Johnson Controls is a world leader in smart buildings, creating safe, healthy and sustainable spaces. For nearly 140 years, we’ve made buildings better and now we’re transforming them again with our award-winning digital technologies and services. We’re using artificial intelligence and data driven solutions to give you deeper insight into your building’s health, sustainability and performance. It’s changing the way we design, operate and maintain indoor environments and driving to a new era of autonomous buildings. We deliver the blueprint of the future for industries such as healthcare, schools, data centers, airports, stadiums, hotels, manufacturing and beyond through OpenBlue, our comprehensive suite of connected solutions. Johnson Controls offers the world’s largest portfolio of building technology, software and services. Supported by a team of more than 100,000 dedicated employees working across 150 countries, we’re helping customers achieve their sustainability goals and power their mission.

Industry

Machinery manufacturing, water transportation, public safety statistics centers and offices and manufacturing

Company size

10,000+ Employees

Headquarters location

Milwaukee, WI, US

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