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Microbial Genomics Jobs (NOW HIRING)

Vivo HealthStaff

Bioinformatics Scientist

Winter Park, FL · On-site

$150K - $180K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics. * Technical Tools: Significant, hands-on experience with Nextflow and Docker ...

Vivo HealthStaff

Bioinformatics Scientist

Ann Arbor, MI

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics. * Technical Tools: Significant, hands-on experience with Nextflow and Docker ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA · On-site

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics.Technical Tools: Significant, hands-on experience with Nextflow and Docker is ...

NCIRE

Staff Research Associate III

San Francisco, CA · On-site

We seek highly talented and motivated candidates with strong backgrounds in microbiology, immunology, microbial genomics, computational biology, and/or murine models of inflammatory disease.

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA · On-site

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics.Technical Tools: Significant, hands-on experience with Nextflow and Docker is ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics. * Technical Tools: Significant, hands-on experience with Nextflow and Docker ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA · On-site

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics. * Technical Tools: Significant, hands-on experience with Nextflow and Docker ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics. * Technical Tools: Significant, hands-on experience with Nextflow and Docker ...

Vivo HealthStaff

Bioinformatics Scientist

Ann Arbor, MI · On-site

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics. * Technical Tools: Significant, hands-on experience with Nextflow and Docker ...

Vivo HealthStaff

Bioinformatics Scientist

Boston, MA · On-site

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics. * Technical Tools: Significant, hands-on experience with Nextflow and Docker ...

Vivo HealthStaff

Bioinformatics Scientist

Winter Park, FL · On-site

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics. * Technical Tools: Significant, hands-on experience with Nextflow and Docker ...

Vivo HealthStaff

Bioinformatics Scientist

Winter Park, FL · On-site

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics.Technical Tools: Significant, hands-on experience with Nextflow and Docker is ...

Vivo HealthStaff

Bioinformatics Scientist

Ann Arbor, MI · On-site

$170K - $190K/yr

Strong background in microbial ecology or related fields, with a distinct preference for expertise in microbial genomics.Technical Tools: Significant, hands-on experience with Nextflow and Docker is ...

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Microbial Genomics information

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How much do microbial genomics jobs pay per hour?

As of Aug 7, 2026, the average hourly pay for microbial genomics in the United States is $19.38, according to ZipRecruiter salary data. Most workers in this role earn between $16.83 and $21.63 per hour, depending on experience, location, and employer.

What is a microbial genomics?

A Microbial Genomics job involves studying the genetic material of microorganisms, such as bacteria, viruses, and fungi, to understand their functions, evolution, and interactions. Professionals in this field analyze genomic data using bioinformatics tools to identify genes linked to traits like antibiotic resistance or pathogenicity. They may work in healthcare, agriculture, biotechnology, or environmental science to develop new treatments, improve microbial applications, or track disease outbreaks.

What does a microbial genomics do?

In a Microbial Genomics role, your daily tasks typically involve processing and analyzing genomic data from microbial samples, performing bioinformatic analyses, and interpreting results to support research objectives. You may design experiments, troubleshoot laboratory protocols, and collaborate closely with microbiologists, data scientists, and other researchers. Regular activities also include documenting findings, preparing reports or manuscripts, and presenting results to team members or external stakeholders. The work environment is often fast-paced and collaborative, providing opportunities to contribute to innovative projects that span clinical, environmental, or industrial microbiology applications.

What are the key skills and qualifications needed to thrive in microbial genomics?

To thrive in Microbial Genomics, a solid background in molecular biology, genetics, and bioinformatics is essential, usually supported by an advanced degree in a relevant life science field. Familiarity with next-generation sequencing (NGS) technologies, genome annotation tools, and data analysis platforms like Python, R, or QIIME is typically required. Strong analytical thinking, collaboration skills, and clear scientific communication help candidates excel in multidisciplinary research environments. Mastery of these skills is crucial for generating accurate genomic insights and contributing to impactful discoveries in healthcare, environmental, or industrial settings.

More about Microbial Genomics jobs
What cities are hiring for Microbial Genomics jobs? Cities with the most Microbial Genomics job openings:
What are the most commonly searched types of Microbial Genomics jobs? The most popular types of Microbial Genomics jobs are:
What states have the most Microbial Genomics jobs? States with the most job openings for Microbial Genomics jobs include:
What job categories do people searching Microbial Genomics jobs look for? The top searched job categories for Microbial Genomics jobs are:
Microbial Genomics jobs near you
Infographic showing various Microbial Genomics job openings in the United States as of August 2026, with employment types broken down into 100% Full Time. Highlights an 75% In-person, 8% Hybrid, and 17% Remote job distribution, with an average salary of $40,307 per year, or $19.4 per hour.

Staff Research Associate III

Northern California Institute for Research and Education

San Francisco, CA • On-site

Full-time

Re-posted 24 days ago

Job description

Position Definition:
The Nayak Lab has an opening for a post-doctoral researcher who is interested in advancing our knowledge of the gut microbiome and its impact on rheumatic diseases, such as rheumatoid arthritis. We use multiple state-of-the-art technologies, including bacterial genomics, metabolomics, anaerobic microbiology, bacterial genetics, gnotobiotic animal models, and studies of patient cohorts to elucidate the mechanisms by which gut microbiota impact patient response to treatment of rheumatic disease. A major driving force of the lab is the advancement of precision medicine for patients with rheumatic disease.
We seek highly talented and motivated candidates with strong backgrounds in microbiology, immunology, microbial genomics, computational biology, and/or murine models of inflammatory disease. Candidates will be expected to work independently and be active contributors to the collaborative multidisciplinary team of microbiologists, immunologists, and computational biologists who form the Nayak Lab. Candidates will be expected to push projects forward with creativity and rigor. The candidate will aid in an ongoing research projects investigating the host-microbe-drug interactions and perform highly specialized as well as routine procedures to conduct well-designed, controlled experiments. The successful candidate will report directly to Dr. Renuka Nayak, MD, PhD but will work closely with collaborators within and outside of the group.
Essential Functions:
  • Responsible for the design, execution, and interpretation of well-designed experiments.
  • Responsible for handling pathogenic microbes and using aseptic techniques, analyzing high-throughput data, performing analytical chemistry experimentation, and working with mouse models of disease.
  • Implement, troubleshoot, optimize, and develop new assays, making innovative contributions to laboratory procedures
  • Assist in maintaining and monitoring all equipment and procedures for quality control
  • Review pertinent medical literature
  • Responsible for data analysis (visualization and statistical analyses in R) and generation manuscript for publication in peer reviewed journals.
  • Responsible for preparation of scientific abstracts and scientific presentations.
  • Responsible for interactions with collaborators, as well as supervision of technicians or students as needed.
  • Maintain a detailed written record of work performed
  • Assist with the composition of grant applications
  • Adhere to data security requirements
  • Perform other duties as assigned (including with managing day-to-day lab operations, performing general lab duties, and being a positive lab citizen)

Required Qualifications:
  • PhD in Microbiology, Genomics, Immunology, Pharmacology or other related field
  • Track record of first-author original research publications
  • Rigorous basic and translational research experience/training during graduate/research training.
  • Significant experience in standard laboratory techniques (such as microbiology and handling pathogenic strains, nucleic acid extraction, PCR, flow cytometry, analytical chemistry, mouse studies, etc.) is required.
  • Working knowledge of safety standards in laboratories.
  • Willingness and ability to learn new methods and skills for changing research priorities.
  • Ability to prioritize tasks, coordinate work tasks with others, and meet multiple deadlines.
  • The candidate should be highly motivated, dedicated, and a team player.
  • Ability to analyze data and perform statistical analyses.
  • Ability to make sound decisions consistent with the essential job functions.
  • Excellent oral and written communication skills.
  • Excellent organizational skills, careful attention to detail, and ability to follow experimental protocols.
  • Excellent time management and attention management skills.
  • Ability to think creatively and to troubleshoot problems as they arise.
  • Ability to work productively with minimal supervision,
  • Excellent interpersonal communication skills (verbal and written).
  • Ability to work as a member of a research team.

Preferred Qualifications:
  • Prior experience in high throughput sequencing and analysis or computational analysis of large datasets
  • Prior experience in mass spectrometry or other analytical chemistry approaches
  • Prior experience in flow cytometry or other immune profiling methods
  • Prior experience in the design and assembly of DNA constructs
  • Prior experience in bacterial genome manipulation
  • Prior experience working with mice

Working Conditions/Environment:
The work environment for this position will include an indoor office and a medical research environment. It may include some minor annoyances such as noise, temperature variations, etc. The incumbent may sustain posture in standing or seated position and may utilize a computer terminal for prolonged periods of time. This is a 100% on-site, full-time position.
VA Onboarding Requirements:
NCIRE is an affiliate organization of the San Francisco VA Health Care System (SFVAHCS), which requires all candidates to complete SFVA onboarding in addition to NCIRE's onboarding process. The SFVA is a federal agency that requires a federal background check, occupational health clearance, vaccines and immunizations, and drug testing for certain positions. Drug testing may include screening for marijuana which remains an illegal substance according to federal law. The failure to pass required drug testing will disqualify candidates from employment.
The base wage range for this position is $68,640.00 - $79639.96 per year. The wage actually offered to a successful candidate will take into account various relevant and non-discriminatory business factors including, without limitation, the candidate's geographic location, job-related experience, knowledge, and skills, and education, as well as internal equity considerations. A successful candidate may also be eligible to earn additional compensation including bonuses.
NCIRE is an Equal Opportunity Employer. This position requires access to United States Government research under the Veterans Administration. Per Veterans Administration regulations surrounding access to US research, qualified US Citizens will be selected over other individuals eligible to work in the United States. If you are eligible to work in the United States, you may still be considered for this position but only if no qualified US citizens apply.
Equal Opportunity Employer/Protected Veterans/Individuals with Disabilities
This employer is required to notify all applicants of their rights pursuant to federal employment laws. For further information, please review the Know Your Rights notice from the Department of Labor.

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