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Medical Software Engineer Jobs in Boston, MA (NOW HIRING)

Collabera

Software Engineer

Avon, MA

... days, Medical, Dental and Vision insurance, 401K retirement savings plan, Life Insurance ... Role Summary/Purpose: Experienced Software Engineer Responsible for programming a component ...

Insight Global

Software Engineer

Boston, MA · Remote

$65 - $85/hr

We are seeking Software Fullstack Engineers (2 senior, 6 midlevel) who are proven software builder ... for medical, dental, and vision insurance. Eligibility to enroll in the 401(k) retirement plan ...

Analogic

Senior Software Engineer

Canton, MA · On-site

$120K - $156K/yr

What You'll Do As a Senior Software Engineer, you'll play a key role in designing and developing ... Comprehensive benefits including medical, dental, vision, life insurance and disability plans.

MORSE Corp

Cloud Software Engineer

Cambridge, MA · On-site

$90K - $210K/yr

As a Cloud Software Engineer at MORSE, you will work on cutting-edge technology and directly ... off, medical, dental, vision and life insurance. Employees also receive 10 paid holidays per year.

Analogic

Senior Software Engineer

Canton, MA · On-site

$120K - $156K/yr

What You'll Do As a Senior Software Engineer, you'll play a key role in designing and developing ... Comprehensive benefits including medical, dental, vision, life insurance and disability plans.

Xometry

Senior Software Engineer

Waltham, MA · On-site

$132K - $174K/yr

Xometry is seeking a Senior Software Engineer to join our software engineering organization. In ... We also offer a competitive benefits package, including 401(k) match, medical, dental and vision ...

Danaher

Software Engineer Internships

Brockton, MA

Producing documentation to support medical device regulatory processes Who This Is For * Students graduating in 2026 or later with a Bachelor's degree in Computer Science, Software Engineering ...

Danaher

Software Engineer Internships

Babson Park, MA · On-site

Producing documentation to support medical device regulatory processes Who This Is For * Students graduating in 2026 or later with a Bachelor's degree in Computer Science, Software Engineering ...

Danaher

Software Engineer Internships

Brockton, MA · On-site

Producing documentation to support medical device regulatory processes Who This Is For * Students graduating in 2026 or later with a Bachelor's degree in Computer Science, Software Engineering ...

Danaher

Software Engineer Internships

Lowell, MA

Producing documentation to support medical device regulatory processes Who This Is For * Students graduating in 2026 or later with a Bachelor's degree in Computer Science, Software Engineering ...

Danaher

Software Engineer Internships

Cambridge, MA

Producing documentation to support medical device regulatory processes Who This Is For * Students graduating in 2026 or later with a Bachelor's degree in Computer Science, Software Engineering ...

Danaher

Software Engineer Internships

Lowell, MA · On-site

Producing documentation to support medical device regulatory processes Who This Is For * Students graduating in 2026 or later with a Bachelor's degree in Computer Science, Software Engineering ...

Danaher

Software Engineer Internships

Cambridge, MA · On-site

Producing documentation to support medical device regulatory processes Who This Is For * Students graduating in 2026 or later with a Bachelor's degree in Computer Science, Software Engineering ...

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Showing results 41-60

All JobsMedical Software Engineer JobsMedical Software Engineer Jobs in Boston, MA

Medical Software Engineer information

See Boston, MA salary details

$69.2K

$160.7K

$223.9K

How much do medical software engineer jobs pay per year?

As of Aug 8, 2026, the average yearly pay for medical software engineer in Boston, MA is $160,704.00, according to ZipRecruiter salary data. Most workers in this role earn between $130,700.00 and $188,500.00 per year, depending on experience, location, and employer.

What does a medical software engineer do?

A medical software engineer designs, develops, and tests software applications used in healthcare settings, such as electronic health records, medical imaging systems, and diagnostic tools. They often work with programming languages like Java or C++, adhere to healthcare regulations, and collaborate with medical professionals to ensure software safety and effectiveness.

What are some common challenges faced by medical software engineers when developing healthcare applications?

Medical Software Engineers often encounter challenges such as ensuring compliance with healthcare regulations (like HIPAA and FDA guidelines), integrating software with various electronic health record (EHR) systems, and maintaining data security and patient privacy. Additionally, they must work closely with clinicians and non-technical stakeholders to translate complex medical requirements into reliable, user-friendly software solutions. Balancing innovation with the need for rigorous testing and validation is also essential due to the critical nature of healthcare technology.

How to break into medical software engineering?

Medical software engineering is a specialized field that requires a strong foundation in software development, often with knowledge of healthcare standards like HL7 or DICOM. Gaining relevant experience through internships, obtaining certifications such as Certified Professional in Healthcare Quality (CPHQ), and understanding regulatory requirements like HIPAA can improve job prospects. Proficiency in programming languages such as Java, C++, or Python and familiarity with electronic health record systems are also valuable.

What is the difference between Medical Software Engineer vs Medical Device Software Engineer?

AspectMedical Software EngineerMedical Device Software Engineer
Required CredentialsBachelor's or higher in CS, Software Engineering, or related; certifications like CSTE or CSQE beneficialSimilar credentials; often requires knowledge of medical device regulations (e.g., FDA, ISO 13485)
Work EnvironmentHealthcare IT companies, software firms, hospitalsMedical device manufacturers, regulatory environments, clinical settings
Employer & Industry UsageHealthcare software solutions, electronic health records, telemedicineDesign, develop, and test software for medical devices like pacemakers, imaging equipment

The main difference is that Medical Software Engineers focus on healthcare software applications, while Medical Device Software Engineers specialize in software for medical devices. Both roles require similar technical skills and certifications but differ in their focus on device regulation and clinical application.

What are the key skills and qualifications needed to thrive as a medical software engineer, and why are they important?

To thrive as a Medical Software Engineer, you need a strong background in software development, familiarity with healthcare standards (like HL7 or DICOM), and typically a degree in computer science, biomedical engineering, or a related field. Experience with programming languages (such as Python, Java, or C++), medical device software regulations (like FDA or ISO 13485), and health information systems is commonly required. Attention to detail, problem-solving skills, and effective communication are essential soft skills for collaborating with clinical teams and ensuring compliance. These competencies are crucial for developing safe, reliable, and compliant medical software that improves patient outcomes and meets regulatory requirements.

What is a medical software engineer?

A medical software engineer is a professional who designs, develops, and maintains software applications used in healthcare settings. Their work supports medical devices, hospital information systems, patient management platforms, and diagnostic tools. They collaborate closely with healthcare professionals to ensure the software meets regulatory standards and improves patient care. Medical software engineers must have expertise in both software development and an understanding of healthcare workflows and compliance requirements.
What are popular job titles related to Medical Software Engineer jobs in Boston, MA? For Medical Software Engineer jobs in Boston, MA, the most frequently searched job titles are:
What job categories do people searching Medical Software Engineer jobs in Boston, MA look for? The top searched job categories for Medical Software Engineer jobs in Boston, MA are:
Medical Software Engineer jobs near you
Infographic showing various Medical Software Engineer job openings in Boston, MA as of August 2026, with employment types broken down into 1% As Needed, 78% Full Time, 15% Part Time, and 6% Contract. Highlights an 91% Physical, 1% Hybrid, and 8% Remote job distribution, with an average salary of $160,704 per year, or $77.3 per hour.

Senior Software Engineer

Superluminal Medicines, Inc.

Boston, MA • On-site

$133K - $175K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 23 days ago

Job description

About Superluminal Medicines:
Superluminal Medicines is a generative biology and chemistry company revolutionizing the speed and accuracy of how small molecule medicines are created. The Company's platform aims to create candidate-ready compounds with unprecedented speed using a combination of deep biology, computational and medicinal chemistry, machine learning, and proprietary big data infrastructure. We are expanding the team of talented scientists who seek to build the future of small molecule drug discovery with creativity and innovation.
About the Role:
We are seeking a Senior Software Engineer to design and build the software systems that power how experimental data moves through Superluminal Medicines.
You will own critical systems at the intersection of software engineering, scientific data, and research operations, including compound registration, experimental data ingestion, scientific system integrations, and the infrastructure that connects wet lab workflows to our broader data platform.
This is a high-ownership engineering role. You will be expected to design production systems, make architectural decisions, write high-quality software, and work directly with scientists to solve complex technical problems. The ideal candidate is a strong software engineer who is excited by difficult integration challenges, evolving requirements, and the opportunity to build foundational systems in a modern drug discovery organization.
Key Responsibilities:
  • Design, build, and operate production software systems supporting scientific data and wet lab workflows.
  • Own the architecture and implementation of systems for compound registration, experimental data ingestion, validation, transformation, and publishing.
  • Build reliable integrations across internal applications, APIs, cloud services, databases, and third-party scientific platforms.
  • Develop backend services, data pipelines, and internal applications used directly by scientists and research teams.
  • Design systems that are observable, testable, resilient, and maintainable as scientific workflows and data volumes scale.
  • Work directly with scientists to understand operational problems, identify root causes, and translate ambiguous workflows into clear technical solutions.
  • Improve data quality and system reliability through validation frameworks, automated testing, monitoring, and well-defined interfaces.
  • Establish strong engineering practices around code quality, CI/CD, deployment, documentation, and operational ownership.
Minimum Qualifications:
  • Bachelor's degree in Software Engineering, Computer Science, Information Technology, or a related field; or equivalent professional experience.
  • 5+ years of professional software engineering experience building and operating production systems.
  • 3+ years of Python experience designing maintainable and well-tested software.
  • Experience building systems that integrate data across APIs, databases, files, asynchronous processes, and third-party platforms.
  • Experience with containers and modern deployment patterns using Docker and Kubernetes.

Experience designing scalable software architecture and making technical design decisions
  • Experience designing and consuming REST APIs.
  • Experience developing production systems on Google Cloud Platform and cloud-native architecture.
  • Experience leading SQL queries, designing relational data models, and developing production data pipelines or workflows.
  • Experience developing and operating production software using automated testing, CI/CD pipelines, application monitoring, logging, and incident troubleshooting practices.
Preferred Qualifications:
  • 8+ years of professional software engineering experience building and operating production systems.
  • Experience in biotechnology, pharmaceuticals, life sciences, or another technically complex scientific environment.
  • Experience with LIMS, ELNs, compound registration systems, laboratory informatics, inventory platforms, or scientific instruments.
  • Familiarity with drug discovery data, including compounds, assays, experimental results, and scientific metadata.
  • Experience with BigQuery, dbt, Dagster, or similar modern data platforms and orchestration tools.
  • Experience building internal tools or user-facing applications for technical users.
  • Familiarity with scientific Python, cheminformatics, or bioinformatics workflows.
  • Experience with infrastructure-as-code and cloud security best practices.
  • Experience modernizing manual, fragmented, or vendor-dependent operational workflows.

Benefits:
Superluminal offers a comprehensive benefits package that fully covers employees' annual deductibles and monthly premiums for medical, dental, and vision insurance. The package also includes a 401(k) match program, a Massachusetts transportation subsidy, equity, unlimited paid time off, and both disability and life insurance.
Equal Opportunity Statement:
Superluminal Medicines is an Equal Opportunity Employer committed to a culturally diverse workforce. All qualified applicants will receive consideration for employment without regard to race; color; creed; religion; national origin; age; ancestry; nationality; marital, domestic partnership or civil union status; sex, gender, gender identity or expression; affectional or sexual orientation; disability; veteran or military status or liability for military status.

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