1

Medical Software Engineer Jobs in New York (NOW HIRING)

Software Engineer

New York, NY ยท On-site +1

$156K - $235K/yr

Develop and direct software system testing and validation procedures, programming, and ... medical, dental, and vision benefits; and wellness stipends. NY27 #LI-DNI

Software Engineer

New York, NY ยท On-site

$260K - $300K/yr

We're the makers of Devin, the first AI software engineer. Our team is extremely talent-dense ... Medical, Dental, Vision: Fully paid for you and your dependents * 401(k): Company match included

Software Engineer

New York, NY ยท On-site

$130K - $160K/yr

Experience developing software for cloud environments * Product-engineering mindset: able to ... medical, dental, and vision) * 401(k) with employer funded match * Unlimited Vacation * Commuter ...

Software Engineer

New York, NY ยท Hybrid

$180K - $200K/yr

... re looking for Software Engineers interested in building high performance, next generation ... a full range of medical, financial, and other benefits, dependent on the position offered.

Software Engineer

New York, NY ยท On-site

$150K - $200K/yr

SOFTWARE ENGINEER Current is a leading consumer fintech platform transforming financial access for ... Medical, Dental and Vision premiums covered at 100% for you and your dependents * Flexible time off ...

Software Engineer

New York, NY ยท On-site

$150K - $200K/yr

SOFTWARE ENGINEER Current is a leading consumer fintech platform transforming financial access for ... Medical, Dental and Vision premiums covered at 100% for you and your dependents * Flexible time off ...

Software Engineer

New York, NY ยท On-site

$175K - $290K/yr

Role Overview As a Software Engineer at Auctor, you will own and lead engineering projects across ... Full medical, dental, and vision coverage * Monthly wellness stipend * Unlimited PTO - take the ...

Benefits include medical insurance, retirement plan, PTO, etc. Salary: 80K+ DOE. Keywords: Fairfield NJ Jobs, C++ Software Engineer, C++, Windows, Linux, SQL Server, STL, Object Oriented Programming ...

Software Engineer

Manhattan, NY ยท On-site +1

$110K - $165K/yr

Software Engineer - AI Tooling & Quality Engineering Platforms Team : Global Quality Engineering ... The benefits available for this position include medical, dental, vision, 401(k) plan, life ...

Software Engineer

New York, NY ยท On-site +1

$100K - $150K/yr

Our client offers a competitive package with a base salary, bonus, and full benefits--medical ... Seeking a Senior Backend Software Engineer with experience in design, development, and support of ...

Our client offers a competitive package with a base salary, bonus, and full benefits--medical ... Seeking a Senior Backend Software Engineer with experience in design, development, and support of ...

The Lead Software Engineer ("LSE") is a hands-on leader of a full-stack software engineering team ... BENEFITS * offers competitive compensation and benefits, including medical, dental, vision, 401(k) ...

Software Engineer

Manhattan, NY ยท On-site

$110K - $165K/yr

Software Engineer - AI Tooling & Quality Engineering Platforms Team : Global Quality Engineering ... The benefits available for this position include medical, dental, vision, 401(k) plan, life ...

Software Engineer

New York, NY ยท On-site

$150K - $350K/yr

About the role Moab is hiring engineers to build software alongside Patrick Anderson and his team ... Medical, dental, and vision insurance coverage

Principal Software Engineer

Bronx, NY ยท On-site +1

$140K - $188K/yr

Whether you're a medical provider, administrator, or operations professional, there's a career here for you. Join us in making a real difference in the health of our community. Job Summary Position ...

Principal Software Engineer

Bronx, NY ยท On-site +1

$140K - $188K/yr

Whether you're a medical provider, administrator, or operations professional, there's a career here for you. Join us in making a real difference in the health of our community. Job Summary Position ...

next page

Showing results 1-20

Medical Software Engineer information

See New York salary details

$69.5K

$161.4K

$224.8K

How much do medical software engineer jobs pay per year?

As of Aug 18, 2026, the average yearly pay for medical software engineer in New York is $161,396.00, according to ZipRecruiter salary data. Most workers in this role earn between $131,300.00 and $189,300.00 per year, depending on experience, location, and employer.

What is a medical software engineer?

A medical software engineer is a professional who designs, develops, and maintains software applications used in healthcare settings. Their work supports medical devices, hospital information systems, patient management platforms, and diagnostic tools. They collaborate closely with healthcare professionals to ensure the software meets regulatory standards and improves patient care. Medical software engineers must have expertise in both software development and an understanding of healthcare workflows and compliance requirements.

What are some common challenges faced by medical software engineers when developing healthcare applications?

Medical Software Engineers often encounter challenges such as ensuring compliance with healthcare regulations (like HIPAA and FDA guidelines), integrating software with various electronic health record (EHR) systems, and maintaining data security and patient privacy. Additionally, they must work closely with clinicians and non-technical stakeholders to translate complex medical requirements into reliable, user-friendly software solutions. Balancing innovation with the need for rigorous testing and validation is also essential due to the critical nature of healthcare technology.

What are the key skills and qualifications needed to thrive as a medical software engineer, and why are they important?

To thrive as a Medical Software Engineer, you need a strong background in software development, familiarity with healthcare standards (like HL7 or DICOM), and typically a degree in computer science, biomedical engineering, or a related field. Experience with programming languages (such as Python, Java, or C++), medical device software regulations (like FDA or ISO 13485), and health information systems is commonly required. Attention to detail, problem-solving skills, and effective communication are essential soft skills for collaborating with clinical teams and ensuring compliance. These competencies are crucial for developing safe, reliable, and compliant medical software that improves patient outcomes and meets regulatory requirements.

What is the difference between Medical Software Engineer vs Medical Device Software Engineer?

AspectMedical Software EngineerMedical Device Software Engineer
Required CredentialsBachelor's or higher in CS, Software Engineering, or related; certifications like CSTE or CSQE beneficialSimilar credentials; often requires knowledge of medical device regulations (e.g., FDA, ISO 13485)
Work EnvironmentHealthcare IT companies, software firms, hospitalsMedical device manufacturers, regulatory environments, clinical settings
Employer & Industry UsageHealthcare software solutions, electronic health records, telemedicineDesign, develop, and test software for medical devices like pacemakers, imaging equipment

The main difference is that Medical Software Engineers focus on healthcare software applications, while Medical Device Software Engineers specialize in software for medical devices. Both roles require similar technical skills and certifications but differ in their focus on device regulation and clinical application.

How to break into medical software engineering?

Medical software engineering is a specialized field that requires a strong foundation in software development, knowledge of healthcare regulations, and familiarity with medical data standards like HL7 or DICOM. Gaining experience through relevant internships, obtaining certifications such as Certified Professional in Healthcare Quality (CPHQ), and developing skills in programming languages like Java, C++, or Python can improve job prospects. Understanding clinical workflows and working with electronic health record (EHR) systems are also valuable for entering this field.

What cities in New York are hiring for Medical Software Engineer jobs?

Cities in New York with the most Medical Software Engineer job openings:

Infographic showing various Medical Software Engineer job openings in New York as of August 2026, with employment types broken down into 1% As Needed, 77% Full Time, 16% Part Time, and 6% Contract. Highlights an 90% Physical, 1% Hybrid, and 9% Remote job distribution, with an average salary of $161,396 per year, or $77.6 per hour.

Sr. Software Engineer (Operational Systems Team)

Cleerly

New York, NY โ€ข On-site, Remote

$134K - $176K/yr

Full-time

Re-posted 29 days ago


Job description

About Cleerly

We're Cleerly – a healthcare company that's revolutionizing how heart disease is diagnosed, treated, and tracked. We were founded in 2017 by one of the world's leading cardiologists and are a growing team of world-class engineering, operations, medical affairs, marketing, and sales leaders. We raised $223M in Series C funding in 2022 which has enabled rapid growth and continued support of our mission. In December 2024 we received an additional $106M in a Series C extension funding. Most of our teams work remotely and have access to our offices in Denver, Colorado, New, York, New York, Dallas, Texas, and Lisbon, Portugal with some roles requiring you to be on-site in a location.

Cleerly has created a new standard of care for heart disease through value-based, AI-driven precision diagnostic solutions with the goal of helping prevent heart attacks. Our technology goes beyond traditional measures of heart disease by enabling comprehensive quantification and characterization of atherosclerosis, or plaque buildup, in each of the heart arteries. Cleerly's solutions are supported by more than a decade of performing some of the world's largest clinical trials to identify important findings beyond symptoms that increase a person's risk of heart attacks.

At Cleerly, we collaborate digitally and use a wide variety of systems. Our people use Google Workspace (GMail, Drive, Docs, Sheets, Slides), Slack, Confluence/Jira, and Zoom Video, prior experience in these areas is a plus. Role or department specific technology needs may vary and will be listed as requirements in the job description.

While we are mostly a remote company, travel is required for some team meetings and cross function projects typically once per month or once per quarter, for some roles like sales or external facing roles travel could be up to 90% of the time.
Cleerly is committed to providing safe and effective medical software that meets customer needs and our intended use. The adherence to all applicable regulatory and statutory requirements establishes a clear framework for setting measurable quality objectives. Our commitment to continually improving our products and processes proactively manages risks, ensuring ongoing compliance throughout the entire software lifecycle. Understanding this role's relevance and importance is critical to achieving Cleerly's quality objectives.

About the Team

The Operational System team owns the Core Lab Case Management platform, which is the central nervous system of our laboratory operations. We build the workflows that orchestrate the lifecycle of each case, ensuring that complex case data moves seamlessly through the lab and is categorized and prioritized correctly. By optimizing how cases are processed, we ensure our operations remain scalable and our COGS grows efficiently, not linearly, alongside our business.

About the Opportunity

We're seeking a Senior Software Engineer to drive key technical initiatives across our platform. In this high-impact role, you'll own complex systems end-to-end, influence architecture decisions, and mentor other engineers, playing a pivotal part in shaping our engineering culture and scaling enterprise capabilities.

Responsibilities

  • Develop scalable backend services (Node.js, TypeScript) and performant user-facing applications (React, Next.js).
  • Design extensible system architectures and make pragmatic trade-offs that balance performance, security, and maintainability.
  • Own full lifecycle delivery of complex features, from architectural planning and API design to UI implementation and post-release observability.
  • Ensure high availability and observability of our services; improve alerting, logging, and incident response across the stack.
  • Set and uphold strong engineering standards via code reviews, technical mentorship, and design documentation.
  • Partner with product, design, and stakeholders to align engineering with business goals and user needs.
  • Lead technical design reviews and system decomposition efforts across teams.
  • Proactively identify risks and gaps in operational or architectural resilience, and drive durable improvements.
  • Collaborate closely across engineering to reduce knowledge silos and ensure continuity in critical systems through cross-training and documentation.
  • Participate in on-call rotations and lead post-incident reviews, driving long-term reliability improvements across systems.

Requirements

  • Bachelor's or Master's degree in Computer Science, Software Engineering, or related field (or equivalent experience).
  • 8–12 years of software engineering experience, with deep expertise in backend systems (Node.js, PostgreSQL) and experience with modern front-end frameworks (React, TypeScript).
  • Proven track record of architecting and delivering scalable systems in production environments.
  • Experience mentoring engineers and raising the technical bar through reviews and design feedback.
  • Strong systems thinking with the ability to evaluate tradeoffs in scalability, reliability, and maintainability.
  • Experience designing for observability and operational excellence (e.g., logs, alerts, dashboards, runbooks).
  • Comfortable operating in ambiguity and driving clarity across product, engineering, and business stakeholders.

Preferred:

  • Familiarity with regulated domains (e.g., healthcare, fintech) and high-availability infrastructure.
  • Experience with containerized cloud environments (Docker, AWS ECS/EKS), CI/CD automation, and infrastructure as code.
  • Exposure to event-driven architecture or microservices with asynchronous workflows.

If you're excited to solve meaningful problems at scale, influence architecture across systems, and mentor the next generation of engineers, we'd love to hear from you.

The base salary range for this role varies by location and is aligned to market benchmarks.

  • Candidates located in higher-cost labor markets, including California, Washington, New York, New Jersey, Connecticut, Massachusetts, and Washington, DC represent the middle to high end of the range, while candidates located in all other U.S. locations represent the low to middle end of the range.
  • Final compensation is determined based on location, experience, skills, and internal equity.

This role is eligible for a 15% target annual bonus, resulting in the following base salary and Total Target Compensation (TTC) ranges:

  • Base Salary: $153,000 - $179,000
  • TTC: $176,000 - $206,000

*Total Target Compensation (TTC): Total Cash Compensation (including base pay, variable pay, commission, bonuses, etc.) Additionally, stock options, paid benefits, and employee perks are part of your total rewards.

Working at Cleerly takes HEART. Discover our Core Values:

  • H: Humility- be a servant leader
  • E: Excellence- deliver world-changing results
  • A: Accountability- do what you say; expect the same from others
  • R: Remarkable- inspire & innovate with impact
  • T: Teamwork- together we win

Don't meet 100 percent of the qualifications? Apply anyway and help us diversify our candidate pool and workforce. We value experience, whether gained formally or informally on the job or through other experiences. Job duties, activities and responsibilities are subject to change by our company.

OUR COMPANY IS AN EQUAL OPPORTUNITY EMPLOYER. We do not discriminate on the basis of race, color, national origin, ancestry, citizenship status, protected veteran status, religion, physical or mental disability, marital status, sex, sexual orientation, gender identity or expression, age, or any other basis protected by law, ordinance, or regulation.

For more information see our Privacy Policy (https://cleerlyhealth.com/privacy-policy). All official emails will come from @cleerlyhealth.com email accounts.

#Cleerly