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Linux System Engineer Jobs in South Carolina (NOW HIRING)

Atlas Technologies Inc

Senior Systems Engineer

Charleston, SC · On-site

$99K - $136K/yr

The Senior Systems Engineer is responsible for the engineering, hardening, baseline enforcement ... Operating System Certificate (e.g., Linux+, Windows Server, CCNA, etc) * Experience supporting Navy ...

Atlas Tech

Systems Administrator

North Charleston, SC · On-site

Linux Systems Engineering (Red Hat-focused) * Design and build complex Red Hat based systems, not just administer them. * Engineer solutions for isolated, fully air-gapped environments with no ...

zentek infosoft

Senior Security Engineer

Columbia, SC

$105K - $145K/yr

Expert in Linux System Administration Expert in a broad range of security tools, Firewalls, NIDS, HIDS, SIEM, Endpoint protection. Experience as a consultant, security engineer, similar ...

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Linux System Engineer information

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$47

$64

How much do linux system engineer jobs pay per hour?

As of Aug 20, 2026, the average hourly pay for linux system engineer in South Carolina is $47.66, according to ZipRecruiter salary data. Most workers in this role earn between $42.40 and $53.56 per hour, depending on experience, location, and employer.

What is a Linux system engineer?

Linux System Engineers are IT professionals who specialize in designing, implementing, maintaining, and troubleshooting Linux-based computer systems and servers. They manage system configurations, install and update software, monitor system performance, and ensure security and reliability. These engineers often automate tasks using scripting languages like Bash or Python and may also configure networks, storage, and cloud environments. Their expertise is critical for organizations that rely on Linux infrastructure for web hosting, application deployment, or enterprise operations.

What does a Linux system engineer do?

As a Linux system engineer, your job duties include designing, implementing, troubleshooting, and monitoring programs created through the Linux system. You handle performance issues, ensure that the company has the proper network infrastructure, and develop new programs and tools for the company. You collaborate with team members to build applications that help others get the most out of the available infrastructure. A Linux system engineer also installs applications and uses software tools and IP network technologies to resolve issues and monitor program performance.

What are the key skills and qualifications needed to thrive as a Linux system engineer, and why are they important?

To thrive as a Linux System Engineer, you need in-depth knowledge of Linux operating systems, scripting languages (such as Bash or Python), and experience with system administration or a related degree. Familiarity with configuration management tools (like Ansible or Puppet), virtualization platforms, cloud services, and relevant certifications (such as RHCE or CompTIA Linux+) is highly beneficial. Problem-solving, attention to detail, and effective communication are crucial soft skills for managing complex systems and collaborating with technical teams. These abilities ensure reliability, security, and efficient operation of critical IT infrastructure.

What are some typical challenges Linux system engineers face when managing large-scale server infrastructures?

Linux System Engineers often encounter challenges related to maintaining system uptime, ensuring security, and managing configuration consistency across a large number of servers. Troubleshooting complex issues can require in-depth knowledge of Linux internals and scripting to automate repetitive tasks. Additionally, collaborating with development and operations teams to ensure smooth deployment of updates and new services is crucial, as is staying updated with rapid changes in open-source technologies.

What is the difference between Linux System Engineer vs Linux Administrator?

AspectLinux System EngineerLinux Administrator
CertificationsLinux Professional Institute (LPIC), CompTIA Linux+LPIC, CompTIA Linux+
Work EnvironmentDesigns, develops, and implements Linux systems, often in complex or large-scale environmentsMaintains, monitors, and supports existing Linux systems in daily operations
ResponsibilitiesSystem architecture, scripting, troubleshooting, and optimizationSystem setup, user management, backups, and routine maintenance
Industry UsageIT, cloud services, data centers, enterprise solutionsIT support, network management, server administration

While both roles require Linux certifications and involve working with Linux systems, Linux System Engineers focus on designing and developing Linux infrastructure, whereas Linux Administrators handle daily maintenance and support tasks. The roles often overlap but differ mainly in scope and complexity.

More about Linux System Engineer jobs

What are the most commonly searched types of Linux System Engineer jobs in South Carolina?

The most popular types of Linux System Engineer jobs in South Carolina are:

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For Linux System Engineer jobs in South Carolina, the most frequently searched job titles are:

What job categories do people searching Linux System Engineer jobs in South Carolina look for?

The top searched job categories for Linux System Engineer jobs in South Carolina are:

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For Linux System Engineer jobs in SC, the most frequently searched job titles are:

Linux System Engineer jobs near you
Infographic showing various Linux System Engineer job openings in South Carolina as of August 2026, with employment types broken down into 1% As Needed, 81% Full Time, 14% Part Time, and 4% Contract. Highlights an 92% Physical, 2% Hybrid, and 6% Remote job distribution, with an average salary of $99,133 per year, or $47.7 per hour.

Senior Systems Engineer

Atlas Technologies Inc

North Charleston, SC • On-site

$99K - $136K/yr

Other

This job post has expired 1 day ago. Applications are no longer accepted.

Job description

Looking for a career where hard work is valued, and your ideas and feedback are part of the way we operate daily? Want to bring your skills to a company that encourages teamwork and champions continued education and process improvement?
Atlas Tech, a veteran-owned IT company serving multiple DoD customers in support of America's warfighters, is looking for a Senior Systems Engineer in North Charleston, SC. This is an onsite position.
The Senior Systems Engineer is responsible for the engineering, hardening, baseline enforcement, and lifecycle management of enterprise Windows, Linux, virtualization, and endpoint management platforms while serving as a technical authority for vulnerability assessment, remediation, and RMF compliance. This is a hands-on, senior-level engineering role requiring extensive experience supporting enterprise IT and C4I systems in secure DoD environments. The candidate must be capable of independently troubleshooting complex system issues, leading vulnerability remediation efforts, and ensuring compliance with DoD, Navy, and DISA cybersecurity requirements.
The ideal candidate for this position will have proven experience in a technology-driven program or project supporting the US Navy. If you have systems engineering skills, a strong work ethic and commitment to quality, we would like to talk to you about joining our growing team.
You Will:
  • Engineer, administer, and secure enterprise Windows and RHEL systems
  • Maintain and enforce baseline configurations
  • Administer and optimize VMware vSphere / ESXi / vCenter environments
  • Support VDI infrastructure
  • Endpoint & Configuration Management
  • Manage Active Directory and Group Policy Objects (GPOs)
  • Develop and maintain automation using: PowerShell, Bash / Linux scripting, Ansible
  • Serve as subject matter expert for ACAS scanning and analysis
  • Lead system-level vulnerability remediation efforts to closure
  • Implement and manage endpoint security solutions: Trellix / HBSS / ESS
  • Support RMF activities, including control validation, POA&M development, and continuous monitoring
  • Ensure compliance with DISA STIGs, DoD policies, and Navy cybersecurity requirements
  • Provide limited support for Brocade switches (firmware, baselines)
  • Troubleshoot systems in lab and production environments
  • Participate in technical reviews, change management, and engineering boards
  • Produce and review technical documentation including implementation plans, test results, and technical reports
  • Coordinate and knowledge-share within a multi-disciplinary engineering team

You Have:
  • ship
  • Possession of a Department of Defense (DoD) Secret Level Security Clearance with a current SSBI/T5 investigation, TS/SCI desired
  • DoD 8140\8570 Certifications to be qualified as an Information Assurance Technician (IAT) Level II (e.g. CompTIA Security+ certification)
  • 10+ years of experience with C4I systems with specific focus on systems engineering and cybersecurity support
  • Bachelor's Degree in Engineering, Computer Science, or related field
  • Operating System Certificate (e.g., Linux+, Windows Server, CCNA, etc)
  • Experience supporting Navy C4I environments
  • VMware, Microsoft, or Linux enterprise certifications
  • Experience supporting classified environments with privileged access
  • Automate infrastructure provisioning using Infrastructure as Code (IaC) tools such as Terraform or Ansible.
  • Strong understanding of DevSecOps principles.
  • Proficiency in scripting and programming languages (e.g., Python, Bash, PowerShell).
  • Experience with CI/CD tools and automation platforms.
  • Familiarity with containerization and cloud security.
  • Excellent communication and collaboration skills.
  • Familiarity with Navy cloud and automation platforms.
  • Git repository management
  • Knowledge of FRCB deployment requirements

Want to hear more? Read on to see what our Team Members say about their experience:
"Atlas Tech has the culture, trust, and fairness that you expect of the best of communities. I feel lucky to be part of their amazing journey of growth as a standout organization." - Syed
"You are not just a number here at Atlas. I have been with Atlas for over 13 years now I can say that Atlas displays a genuine interest in its employees. This is evidenced in its commitment to mentoring every employee and providing educational paths for each employee's personal and professional growth within the company." - Ian
Atlas Tech is an equal opportunity employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, age, sexual orientation, gender identity, national origin, disability, genetic information, or protected veteran status. We are committed to fostering an inclusive workplace where diverse perspectives are valued and respected.
Accessibility & Accommodations
Atlas Tech strives to make our website, , accessible to all users. If you need assistance completing the application process or require a reasonable accommodation due to a disability, please contact us at
This contact information is designated for accommodation requests only and cannot be used to inquire about the status of an application. Atlas Tech is committed to providing reasonable accommodations in accordance with the Americans with Disabilities Act (ADA).
Atlas Tech offers a competitive salary, generous benefits package, and an opportunity to make a positive impact in your own community.

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