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Junior Systems Engineer Secret Clearance Jobs (NOW HIRING)

Leidos

Junior Systems Engineer

Huntsville, AL · On-site

$69K - $125K/yr

Leidos' Defense Systems Land Systems is seeking a Junior Systems Engineer to join a team of systems ... Possess a secret clearance, or have the ability to obtain a secret clearance. Preferred ...

Leidos

Junior Systems Engineer

Huntsville, AL

$69K - $125K/yr

Leidos' Defense Systems Land Systems is seeking a Junior Systems Engineer to join a team of systems ... Possess a secret clearance, or have the ability to obtain a secret clearance. Preferred ...

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Junior Systems Engineer Secret Clearance information

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$147.5K

How much do junior systems engineer secret clearance jobs pay per year?

As of Aug 19, 2026, the average yearly pay for junior systems engineer secret clearance in the United States is $85,409.00, according to ZipRecruiter salary data. Most workers in this role earn between $62,500.00 and $87,500.00 per year, depending on experience, location, and employer.

What does a junior systems engineer with secret clearance do?

A Junior Systems Engineer with Secret Clearance supports the design, implementation, and maintenance of computer systems and networks for organizations, often within government or defense sectors. They assist senior engineers with troubleshooting, system updates, and ensuring security protocols are followed. The Secret Clearance allows them to access sensitive information necessary for their work. This role is ideal for individuals starting their careers in IT or engineering who want to contribute to secure, mission-critical projects.

What are the key skills and qualifications needed to thrive as a junior systems engineer with secret clearance?

To excel as a Junior Systems Engineer with Secret Clearance, you typically need a bachelor’s degree in a technical field, foundational knowledge of IT systems, and eligibility for U.S. government security clearance. Familiarity with tools such as Windows/Linux operating systems, basic networking protocols, and configuration management software is commonly required. Strong problem-solving, attention to detail, and effective communication skills help you collaborate across teams and address technical challenges. These qualifications ensure you can securely support complex systems vital to government operations while maintaining compliance and efficiency.

What are the typical responsibilities of a junior systems engineer with secret clearance, and how does the clearance level impact daily tasks?

As a Junior Systems Engineer with Secret Clearance, you will assist in configuring, maintaining, and troubleshooting IT systems, often within government or defense environments. The Secret Clearance allows you to access sensitive information and systems, so you must adhere to strict security protocols and documentation standards. Your daily tasks may include supporting senior engineers, monitoring system performance, and participating in security audits. Collaboration with cross-functional teams is common, and you'll often need to communicate technical findings clearly to both technical and non-technical stakeholders.

What is the difference between Junior Systems Engineer Secret Clearance vs Systems Engineer Secret Clearance?

AspectJunior Systems Engineer Secret ClearanceSystems Engineer Secret Clearance
CredentialsTypically requires a relevant degree and security clearanceRequires a higher level of experience but similar credentials
Work EnvironmentEntry-level roles in government or defense projectsMore advanced roles with increased responsibilities
Employer & IndustryGovernment agencies, defense contractorsGovernment, defense, aerospace companies
Search & Comparison IntentUnderstanding entry-level vs experienced roles in security clearanceClarifying career progression in systems engineering with clearance

The main difference between a Junior Systems Engineer Secret Clearance and a Systems Engineer Secret Clearance lies in experience and responsibility level. Junior roles are entry-level, focusing on learning and supporting projects, while Systems Engineers have more experience and handle complex tasks. Both require security clearance and similar credentials, but the seniority and scope of work differ.

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Junior Systems Engineer Secret Clearance jobs near you
Infographic showing various Junior Systems Engineer Secret Clearance job openings in the United States as of August 2026, with employment types broken down into 1% As Needed, 85% Full Time, 9% Part Time, 4% Contract, and 1% Nights. Highlights an 88% Physical, 3% Hybrid, and 9% Remote job distribution, with an average salary of $85,409 per year, or $41.1 per hour.

DevOps Engineer - Secret Clearance

Zachary Piper Solutions

Raleigh, NC • On-site

$140 - $170/hr

Other

Medical, Dental, Vision, Retirement, PTO

Posted yesterday

New

Job description

Zachary Piper Solutions is seeking a DevOps Engineer – Secret Clearance for a leading technology organization in the Raleigh Durham, North Carolina area. The DevOps Engineer – Secret Clearance role is an onsite role in the office and supports mission‑critical systems in a secure environment. An ideal candidate for the DevOps Engineer – Secret Clearance role is an experienced DevOps professional with strong expertise in infrastructure as code, container orchestration, and automation using modern DevOps tooling.

Responsibilities of the DevOps Engineer - Secret Clearance:
  • Design, build, and maintain CI/CD pipelines to support secure application development and deployment.
  • Develop and manage infrastructure as code using Terraform and Terragrunt across multiple environments.
  • Deploy, manage, and optimize Kubernetes clusters in secure, compliant environments.
  • Build automation and tooling using Python to improve deployment, monitoring, and operational efficiency.
  • Collaborate with software engineering, cybersecurity, and operations teams to ensure system reliability and scalability.
  • Monitor system performance, troubleshoot issues, and implement continuous improvements aligned with mission requirements.
Qualifications of the DevOps Engineer - Secret Clearance:
  • 5+ years of experience in DevOps, cloud engineering, or systems engineering roles.
  • Active Secret clearance is required.
  • Strong hands‑on experience with Terraform and Terragrunt for infrastructure provisioning.
  • Experience managing containerized applications using Kubernetes and Docker.
  • Proficiency in Python for scripting, automation, and tooling development.
  • Experience with cloud platforms such as AWS, Azure, or GCP, preferably within government or regulated environments.
Compensation for the DevOps Engineer - Secret Clearance includes:
  • Salary range: $140,000 - $170,000
  • Comprehensive benefits package including medical, dental, vision, 401(k), PTO, Sick Leave as required by law

This job opens for applications on 05/13/2026. Applications for this job will be accepted for at least 30 days from the posting date.

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