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How much do high performance computing engineer jobs pay per hour?

As of May 30, 2026, the average hourly pay for high performance computing engineer in the United States is $60.11, according to ZipRecruiter salary data. Most workers in this role earn between $49.28 and $68.03 per hour, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a High Performance Computing Engineer, and why are they important?

To thrive as a High Performance Computing (HPC) Engineer, you need a strong background in computer science, parallel programming, and distributed systems, typically supported by a relevant degree. Familiarity with HPC clusters, Linux/Unix environments, programming languages like C/C++ or Python, and tools such as MPI, OpenMP, and job schedulers is essential. Analytical thinking, problem-solving, and effective teamwork are crucial soft skills for optimizing system performance and collaborating with researchers or end-users. These abilities ensure efficient computational solutions, maximize resource utilization, and drive innovation in data-intensive scientific or engineering projects.

What are some common challenges High Performance Computing Engineers face when optimizing system performance?

High Performance Computing Engineers often encounter challenges such as balancing resource allocation, managing workload distribution, and minimizing system bottlenecks. They must ensure that hardware and software components interact efficiently, which can require deep knowledge of parallel computing, networking, and storage systems. Additionally, staying up-to-date with rapidly evolving technologies and troubleshooting complex performance issues are integral parts of the role. Collaborating closely with researchers and IT teams is essential to tailor solutions that meet specific computational needs.

What is a High Performance Computing Engineer?

A High Performance Computing (HPC) Engineer is a specialist who designs, builds, and maintains advanced computing systems that deliver exceptional processing power for complex computational tasks. These professionals optimize hardware and software environments to support scientific research, large-scale simulations, and data-intensive applications. They work with supercomputers, clusters, and cloud HPC resources, ensuring high efficiency, scalability, and reliability. HPC Engineers also support researchers and organizations in maximizing the performance of their computing infrastructure.

What is the difference between High Performance Computing Engineer vs Data Scientist?

AspectHigh Performance Computing EngineerData Scientist
Required CredentialsBachelor's or master's in computer science, engineering, or related fields; knowledge of parallel computingBachelor's or master's in data science, statistics, or related fields; programming skills in Python, R
Work EnvironmentResearch labs, tech companies, supercomputing centersBusiness, tech firms, research institutions
Industry UsageSupercomputing, scientific research, simulationsData analysis, machine learning, predictive modeling

High Performance Computing Engineers focus on developing and optimizing large-scale computing systems for scientific and technical applications, while Data Scientists analyze data to extract insights. Both roles require programming skills and work in tech-driven environments, but their core objectives differ: system performance versus data analysis.

More about High Performance Computing Engineer jobs
What are the most commonly searched types of High Performance Computing Engineer jobs? The most popular types of High Performance Computing Engineer jobs are:
What states have the most High Performance Computing Engineer jobs? States with the most job openings for High Performance Computing Engineer jobs include:
What job categories do people searching High Performance Computing Engineer jobs look for? The top searched job categories for High Performance Computing Engineer jobs are:
High Performance Computing Engineer jobs near you
Infographic showing various High Performance Computing Engineer job openings in the United States as of May 2026, with employment types broken down into 3% As Needed, 82% Full Time, 3% Part Time, 11% Contract, and 1% Nights. Highlights an 67% Physical, and 33% Remote job distribution, with an average salary of $125,019 per year, or $60.1 per hour.

High Performance Computing (HPC) Engineer

GenBio AI

Palo Alto, CA

Full-time

Posted 23 days ago

Job description

Headquartered in Silicon Valley, we are a newly established start-up, where a collective of visionary scientists, engineers, and entrepreneurs are dedicated to transforming the landscape of biology and medicine through the power of Generative AI. Our team comprises leading minds and innovators in AI and Biological Science, pushing the boundaries of what is possible. We are dreamers who reimagine a new paradigm for biology and medicine.
 
We are committed to decoding biology holistically and enabling the next generation of life-transforming solutions. As the first mover in pan-modal Large Biological Models (LBM), we are pioneering a new era of biomedicine, with our LBM training leading to ground-breaking advancements and a transformative approach to healthcare. Our exceptionally strong R&D team and leadership in LLM and generative AI position us at the forefront of this revolutionary field. With headquarters in Silicon Valley, California, and a branch office in Paris, we are poised to make a global impact. Join us as we embark on this journey to redefine the future of biology and medicine through the transformative power of Generative AI.
Job Description
  • GPU Cluster Management: Design, deploy, and maintain high-performance GPU clusters, ensuring their stability, reliability, and scalability. Monitor and manage cluster resources to maximize utilization and efficiency.
  • Distributed/Parallel Training: Implement distributed computing techniques to enable parallel training of large deep learning models across multiple GPUs and nodes. Optimize data distribution and synchronization to achieve faster convergence and reduced training times.
  • Performance Optimization: Fine-tune GPU clusters and deep learning frameworks to achieve optimal performance for specific workloads. Identify and resolve performance bottlenecks through profiling and system analysis.
  • Deep Learning Framework Integration: Collaborate with data scientists and machine learning engineers to integrate distributed training capabilities into GenBio AI’s model development and deployment frameworks. 
  • Scalability and Resource Management: Ensure that the GPU clusters can scale effectively to handle increasing computational demands. Develop resource management strategies to prioritize and allocate computing resources based on project requirements. 
  • Troubleshooting and Support: Troubleshoot and resolve issues related to GPU clusters, distributed training, and performance anomalies. Provide technical support to users and resolve technical challenges efficiently.
  • Documentation: Create and maintain documentation related to GPU cluster configuration, distributed training workflows, and best practices to ensure knowledge sharing and seamless onboarding of new team members.
Job Requirements:
  • Master’s or Ph.D. degree in computer science, or a related field with a focus on High-Performance Computing, Distributed Systems, or Deep Learning.
  • 2+ years proven experience in managing GPU clusters, including installation, configuration, and optimization.
  • Strong expertise in distributed deep learning and parallel training techniques.
  • Proficiency in popular deep learning frameworks like PyTorch, Megatron-LM, DeepSpeed, etc.
  • Programming skills in Python and experience with GPU-accelerated libraries (e.g., CUDA, cuDNN).
  • Knowledge of performance profiling and optimization tools for HPC and deep learning.
  • Familiarity with resource management and scheduling systems (e.g., SLURM, Kubernetes)
  • Strong background in distributed systems, cloud computing (AWS, GCP), and containerization (Docker, Kubernetes)
Join us as we embark on this journey to redefine the future of biology and medicine.
We are an equal opportunity employer. We celebrate diversity and are committed to creating an inclusive environment for all employees. GenBio AI participates in the U.S. Department of Homeland Security’s E-Verify program to confirm the employment eligibility of all newly hired employees. For more information on E-Verify, please visit www.e-verify.gov.

We may use artificial intelligence (AI) tools to support parts of the hiring process, such as reviewing applications, analyzing resumes, or assessing responses. These tools assist our recruitment team but do not replace human judgment. Final hiring decisions are ultimately made by humans. If you would like more information about how your data is processed, please contact us.