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Gromacs Jobs (NOW HIRING)

AMBER, GROMACS, OpenMM, PLUMED, Schrödinger, OpenEye) * Strong background in cheminformatics: molecular fingerprints, QSAR/QSPR, property prediction, scaffold analysis, cheminformatics libraries (e ...

Extensive experience in using and troubleshooting software tools for QC calculations (e.g., ORCA, xTB, CREST, etc.), MD simulations (e.g., GROMACS, OpenMM, etc.), Drug Design Development Packages (e ...

Extensive experience in using and troubleshooting software tools for QC calculations (e.g., ORCA, xTB, CREST, etc.), MD simulations (e.g., GROMACS, OpenMM, etc.), Drug Design Development Packages (e ...

Extensive experience in using and troubleshooting software tools for QC calculations (e.g., ORCA, xTB, CREST, etc.), MD simulations (e.g., GROMACS, OpenMM, etc.), Drug Design Development Packages (e ...

MOE, PyMOL, OpenMM / GROMACS / AMBER). * Familiarity with core drug discovery and medicinal chemistry principles - translating diverse assay readouts into design hypotheses - and a clear ...

Extensive experience in using and troubleshooting software tools for QC calculations (e.g., ORCA, xTB, CREST, etc.), MD simulations (e.g., GROMACS, OpenMM, etc.), Drug Design Development Packages (e ...

Extensive experience in using and troubleshooting software tools for QC calculations (e.g., ORCA, xTB, CREST, etc.), MD simulations (e.g., GROMACS, OpenMM, etc.), Drug Design Development Packages (e ...

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Gromacs information

What are the key skills and qualifications needed to thrive as a Gromacs Computational Chemist, and why are they important?

To excel as a Gromacs Computational Chemist, a strong background in molecular dynamics, chemistry, or biophysics, typically with an advanced degree, is essential. Proficiency with the Gromacs software suite, scripting languages (such as Python or Bash), and familiarity with Linux-based systems are commonly required. Attention to detail, analytical thinking, and effective communication are crucial soft skills for interpreting simulation results and collaborating with research teams. These competencies ensure accurate molecular simulations, meaningful data interpretation, and successful scientific outcomes.

What are some typical challenges faced by professionals using GROMACS in molecular dynamics simulations?

Professionals using GROMACS often encounter challenges such as optimizing simulation parameters for accuracy and performance, managing large datasets, and troubleshooting errors related to software compatibility or input files. Additionally, ensuring reproducibility and interpreting complex simulation results can require collaboration with other computational chemists or domain experts. Regularly updating skills and staying current with new GROMACS features is also important for efficiency and best practices.

What is the difference between Gromacs vs Molecular Dynamics Software Engineer?

AspectGromacsMolecular Dynamics Software Engineer
CredentialsKnowledge of molecular dynamics, computational chemistry, and LinuxDegree in chemistry, physics, or related field; experience with molecular simulation tools
Work EnvironmentResearch labs, academic institutions, or software development teamsResearch institutions, biotech companies, or pharmaceutical firms
Industry UsagePrimarily used for molecular dynamics simulations in biochemistry and biophysicsDevelops or applies molecular dynamics software for scientific research and drug discovery

Gromacs is a specialized open-source software for molecular dynamics simulations, focusing on performance and accuracy. A Molecular Dynamics Software Engineer designs, develops, or maintains such software, often requiring broader programming skills and software engineering expertise. While Gromacs users run simulations, Molecular Dynamics Software Engineers create and improve the tools used for these simulations.

What is Gromacs?

Gromacs is an open-source software package primarily designed for molecular dynamics simulations of proteins, lipids, and nucleic acids. It is widely used in computational chemistry and biophysics to model the movements of atoms and molecules over time. Gromacs is known for its high performance, flexibility, and ability to run efficiently on a range of hardware, from laptops to supercomputers. Researchers use Gromacs to study molecular interactions, protein folding, and drug design, among other applications.
More about Gromacs jobs
What cities are hiring for Gromacs jobs? Cities with the most Gromacs job openings:
What states have the most Gromacs jobs? States with the most job openings for Gromacs jobs include:
Infographic showing various Gromacs job openings in the United States as of May 2026, with employment types broken down into 100% Full Time. Highlights an 92% Physical, and 8% Remote job distribution.

Postdoc - Drug Discovery Development and Application Scientist

Rutgers University

Piscataway, NJ • On-site

$63K/yr

Full-time

Medical, Dental, Life, Retirement, PTO

Posted 5 days ago


Rutgers University rating

7.7

Company rating: 7.7 out of 10

Based on 66 frontline employees who took The Breakroom Quiz

214th of 534 rated colleges and universities


Job description

Position Details
Position Information
Recruitment/Posting Title
Postdoc - Drug Discovery Development and Application Scientist
Department
Quantitative Biomedicine Inst
Salary Details
$63,968 Minimum
Offer Information
The final salary offer may be determined by several factors, including, but not limited to, the candidate's qualifications, experience, and expertise, and availability of department or grant funds to support the position. We also take into consideration market benchmarks, if and when appropriate, and internal equity to ensure fair compensation relative to the university's broader compensation structure. We are committed to offering competitive and flexible compensation packages to attract and retain top talent.
Benefits
Rutgers offers a comprehensive benefits package to eligible employees, based on position, which includes:
  • Medical, prescription drug, and dental coverage
  • Paid vacation, holidays, and various leave programs
  • Competitive retirement benefits, including defined contribution plans and voluntary tax-deferred savings options
  • Employee and dependent educational benefits
  • Life insurance coverage
  • Employee discounts programs

For detailed information on benefits and eligibility, please visit: http://uhr.rutgers.edu/benefits/benefits-overview.
Posting Summary
The Laboratory for Biomolecular Simulation Research (http://lbsr.rutgers.edu) and Institute for Quantitative Biomedicine (https://iqb.rutgers.edu/) at Rutgers, the State University of New Jersey, is in search of a postdoctoral-level drug discovery application scientist. Our current endeavor involves an exciting NIH-funded project aimed at developing a state-of-the-art next-generation simulation package. We are actively seeking a skilled and enthusiastic researcher to join our team. As part of this opportunity, you will be able to:
• Contribute cutting-edge research in biomolecular simulations, gaining valuable practical experience and expanding your expertise in this field.
• Establish connections within the dynamic simulation community, fostering strong networks with other academic and industrial researchers, especially those involved in molecular simulation-based computer-aided drug discovery.
This position is ideally suited for individuals with career aspirations as application scientists within the drug-discovery field.
Position Status
Full Time
Posting Number
26FA0457
Posting Open Date
05/05/2026
Posting Close Date
Qualifications
Minimum Education and Experience
Applicants must hold a PhD in computational chemistry or closely related fields, have a deep working knowledge of theoretical/computational chemistry, and a solid publication track record.
Certifications/Licenses
Required Knowledge, Skills, and Abilities
  • Working knowledge of protein-ligand interactions, in silico drug design/optimization, MD simulation theories, and applications.
  • Familiarity with at least one of the following simulation packages: AMBER, GROMACS, OpenMM, CHARMM, and the ability to independently perform MD and free energy simulations
  • Familiarity with or a willingness to learn CI/CD, documentation, and other aspects of GitLab.

Preferred Qualifications
Equipment Utilized
AMBER, OpenMM, and GROMACS simulation packages, relevant molecular simulation analysis tools, Python programming language, and GitLab environment.
Physical Demands and Work Environment
  • Predominantly operates in an office environment using a computer workstation and laptop computer, participates in both physical and virtual team meetings, and periodically attends workshops and conferences that entail domestic or international travel.
  • Remote work, with regularly scheduled in-person reporting to the PI, is possible through mutual agreement.

Overview
The successful applicant is expected to perform the following:
  • Explore drug-discovery problems with the PI's new SAMTI approach (10.1021/acs.jpcb.5c05358).
  • Collaborate with academic and industrial users to perform simulations for drug-discovery projects and to create and maintain software requirement documents for our next-generation simulation package.
  • Actively monitor the AMBER user forum email list regularly and provide timely responses and support to users on the forum, according to the Principal Investigator's (PI) guidance.
  • Conduct beta tests and meticulously document test records/reports for newly implemented features in the AMBER and upcoming simulation packages.
  • Maintain a centralized information-sharing website for all the above tasks.

Statement
Posting Details
Special Instructions to Applicants
Quick Link to Posting
https://jobs.rutgers.edu/postings/274351
Campus
Rutgers University-New Brunswick
Home Location Campus
Busch (RU-New Brunswick)
City
Piscataway
State
NJ
Location Details
Pre-employment Screenings
All offers of employment are contingent upon successful completion of all pre-employment screenings.
Immunization Requirements
Under Policy 100.3.1 Immunization Policy for Covered Individuals, if employment will commence during Flu Season, Rutgers University may require certain prospective employees to provide proof that they are vaccinated against Seasonal Influenza for the current Flu Season, unless the University has granted the individual a medical or religious exemption. Additional infection control and safety policies may apply. Prospective employees should speak with their hiring manager to determine which policies apply to the role or position for which they are applying. Failure to provide proof of vaccination for any required vaccines or obtain a medical or religious exemption from the University will result in rescission of a candidate's offer of employment or disciplinary action up to and including termination.
Equal Employment Opportunity Statement
It is university policy to provide equal employment opportunity to all its employees and applicants for employment regardless of their race, creed, color, national origin, age, ancestry, nationality, marital or domestic partnership or civil union status, sex, pregnancy, gender identity or expression, disability status, liability for military service, protected veteran status, affectional or sexual orientation, atypical cellular or blood trait, genetic information (including the refusal to submit to genetic testing), or any other category protected by law. As an institution, we encourage all qualified applicants to apply. For additional information please see the Non-Discrimination Statement at the following web address: http://uhr.rutgers.edu/non-discrimination-statement

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