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Genome Software Engineer Jobs (NOW HIRING)

Scientific Data Engineer

Bodega Bay, CA ยท On-site

$135K - $163K/yr

... Genome Institute. * Maintain and manage open source software products, including managing ... Strong programming experience in Python. Working proficiency in C++ or Javascript is a plus.

Bioinformatics Engineer, QDI

Redwood City, CA ยท On-site

$130K - $150K/yr

We have developed industry-leading software tools for analysis and reporting of biological data. We ... Familiarity with bioinformatics tools in genome biomedical research (e.g., genomic databases ...

We have developed industry-leading software tools for analysis and reporting of biological data. We ... Familiarity with bioinformatics tools in genome biomedical research (e.g., genomic databases ...

Collaborate with epidemiologists, laboratorians, statisticians, and software developers to ... Whole Genome Sequencing of Viral Pathogens * Provide expert bioinformatics support for Whole Genome ...

Collaborate with epidemiologists, laboratorians, statisticians, and software developers to ... Whole Genome Sequencing of Viral Pathogens * Provide expert bioinformatics support for Whole Genome ...

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Genome Software Engineer information

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$63.5K

$147.5K

$205.5K

How much do genome software engineer jobs pay per year?

As of Sep 10, 2026, the average yearly pay for genome software engineer in the United States is $147,524.00, according to ZipRecruiter salary data. Most workers in this role earn between $120,000.00 and $173,000.00 per year, depending on experience, location, and employer.

What is a genome software engineer?

A Genome Software Engineer is a professional who develops, maintains, and optimizes software tools and systems used for analyzing genomic data. They work at the intersection of computer science and genomics, creating software solutions that help researchers process and interpret large-scale DNA sequencing data. These engineers often collaborate with biologists, bioinformaticians, and data scientists to support genetic research, clinical applications, and biotechnology development.

What are the key skills and qualifications needed to thrive as a genome software engineer?

To thrive as a Genome Software Engineer, you need a strong background in computer science, bioinformatics, and genomics, typically supported by a relevant degree and experience in software development. Familiarity with programming languages (such as Python, C++, or R), genomic data analysis tools (like GATK or SAMtools), and cloud computing platforms is essential. Excellent problem-solving, teamwork, and communication skills help you collaborate effectively with multidisciplinary teams and address complex biological challenges. These competencies ensure the development of robust, efficient software solutions that advance genomic research and healthcare applications.

What are some common challenges genome software engineers face when working with large-scale genomic datasets?

Genome Software Engineers often work with extremely large and complex datasets generated from sequencing projects. A common challenge is ensuring efficient data storage, retrieval, and processing while maintaining data integrity and privacy. Optimizing algorithms for speed and scalability, especially when handling terabytes or petabytes of genomic data, is critical. Additionally, collaboration with biologists and other domain specialists is essential for interpreting requirements and ensuring that software tools meet the specific needs of genomic research.

What are popular job titles related to Genome Software Engineer jobs?

For Genome Software Engineer jobs, the most frequently searched job titles are:

Sr. Software Engineer (Health AI and Machine Learning)

Palo Alto, CA โ€ข On-site

$144K - $190K/yr

Other

Posted 22 days ago


Job description

23andMe is looking for a Senior Software Engineer to help build the AI systems that turn one of the world's largest genetic datasets into personalized health insights. You'll design and operate agentic AI pipelines that retrieve relevant genetic context, orchestrate LLMs, and deliver results that customers use to make real health decisions. The quality bar is high โ€” and that's exactly the point. Our Engineering team is based in the San Francisco Bay Area, CA, and this position will follow our hybrid work model.

Who We Are

We are a group of individuals passionate about genetic discovery.

23andMe Research Institute is a nonprofit medical research organization that enables people everywhere to access their genetic information, learn about themselves, and participate in the world's largest crowdsourced research initiative. The Institute aims to be the world's most significant contributor to scientific advancement, uniting people with the common goal of improving health and deepening our understanding of DNA โ€” the code of life.

What Youโ€™ll Do
  • Build agentic AI systems that generate personalized health and ancestry insights for customers, orchestrating LLMs with relevant genetic and clinical context
  • Design and implement RAG pipelines that retrieve relevant context from vector stores to ground model outputs in a customer's specific genetic data
  • Build robust evaluation frameworks to measure model quality, catch regressions, and ensure AI-generated results meet the bar for a health product
  • Build and rely on CI/CD methods and automatic testing to ensure reliable code, continuously delivered
  • Debug production incidents and get services back online โ€“ you'll own what you ship
  • Integrate AI into daily workflows to automate tasks and improve efficiency
What Youโ€™ll Bring
  • B.S. in Computer Science or equivalent; 4+ years of industry experience
  • Hands-on experience building agentic AI systems and LLM-powered pipelines in production
  • Experience with RAG architectures and vector stores
  • Strong instincts around LLM evaluation: you understand why "it looks good" isn't enough for a health product
  • Proficiency with Python and related scientific libraries (pandas, pytorch)
  • Infrastructure as code experience, ideally in Terraform on AWS, containerized in Docker
  • Hands-on experience working with CI/CD deployment pipelines and testing frameworks
  • A team player attitude with comfortability operating cross-functionally across the organization
What We Offer

A small, high-trust team with real ownership, autonomy, and direct impact on one of the most scientifically rich datasets in the world. You'll work at the intersection of software engineering and cutting-edge genetic research without needing to be a scientist yourself. Our R&D and bioinformatics teams own the science; your job is to make it production-ready and scalable, supported by some of the sharpest minds in genomics who are excited to bring you up to speed.

We're an AI-friendly team that actively uses tools like Claude Code to help engineers do their best work. You'll ship multiple times per week and build systems that matter to millions of people.

About Us

23andMe, headquartered in California, is a leading consumer genetics and research company. The companyโ€™s mission is to help people access, understand, and benefit from the human genome.

23andMe has pioneered direct access to genetic information as the only company with multiple FDA authorizations for genetic health risk reports. The company has created the worldโ€™s largest crowdsourced platform for genetic research, with 80 percent of its customers electing to participate.

23andMe research participants consent to research conducted by 23andMe which is overseen by an independent third-party Institutional Review Board (IRB) regulated under the 'Common Rule' (45 CFR part 46). More information is available at www.23andme.com/research.

At 23andMe, we value a diverse, inclusive workforce and we provide equal employment opportunity for all applicants and employees. All qualified applicants for employment will be considered without regard to an individualโ€™s race, color, sex, gender identity, gender expression, religion, age, national origin or ancestry, citizenship, physical or mental disability, medical condition, family care status, marital status, domestic partner status, sexual orientation, genetic information, military or veteran status, or any other basis protected by federal, state or local laws. If you are unable to submit your application because of incompatible assistive technology or a disability, please contact us at accommodations-ext@23andme.com. 23andMe will reasonably accommodate qualified individuals with disabilities to the extent required by applicable law.

Pay Transparency

23andMe takes a market-based approach to pay, and amounts will vary depending on your geographic location. The salary range reflected here is for a candidate based in the San Francisco Bay Area. The successful candidateโ€™s starting pay will be determined based on job-related skills, experience, qualifications, work location, and market conditions. These ranges may be modified in the future.

San Francisco Bay Area Base Pay Range $165,000-$200,000

What will you be empowered to do?

At 23andMe, we value a diverse, inclusive workforce and we provide equal employment opportunity for all applicants and employees. All qualified applicants for employment will be considered without regard to an individualโ€™s race, color, sex, gender identity, gender expression, religion, age, national origin or ancestry, citizenship, physical or mental disability, medical condition, family care status, marital status, domestic partner status, sexual orientation, genetic information, military or veteran status, or any other basis protected by federal, state or local laws. If you are unable to submit your application because of incompatible assistive technology or a disability, please contact us at accomodations-ext@23andme.com. 23andMe will reasonably accommodate qualified individuals with disabilities to the extent required by applicable law.

Please note: 23andMe does not accept agency resumes and we are not responsible for any fees related to unsolicited resumes.

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