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Fhir Data Engineer Jobs (NOW HIRING)

Collaborate with data engineering to maintain high-quality, well-governed clinical and FHIR data ... inputs; define feature engineering and chunking strategies that optimize retrieval precision.

Data Engineer

Miami, FL · On-site

$120K - $180K/yr

We are seeking a Data Engineer to join our dynamic team. The ideal candidate is an enthusiastic ... Experience in healthcare or imaging (e.g., DICOM, HL7/FHIR). * Familiarity with DevOps tools ...

Data Engineer

Aliso Viejo, CA · On-site

$50 - $55/hr

Knowledge of healthcare data standards such as HL7, FHIR, ICD, and CPT. * Experience with Snowflake ... Data Engineering. * Data Pipeline Development. * ETL/ELT Design and Development. * Data Warehousing ...

AWS Data Engineer

CO · On-site +1

$114K - $137K/yr

Job Brief As an AWS Data Engineer, your role will be to design, develop, and maintain scalable data ... FHIR) • Secure data handling (KMS, Macie) • Cloud-native analytics • Multi-account, multi ...

AWS Data Engineer

CO · On-site +1

$114K - $137K/yr

Job Brief As an AWS Data Engineer, your role will be to design, develop, and maintain scalable data ... FHIR) • Secure data handling (KMS, Macie) • Cloud-native analytics • Multi-account, multi ...

Lead Data Engineer

$117K - $140K/yr

Support interoperability workflows using HL7 and FHIR standards. * Perform EHI export-related tasks ... experience in data engineering, ETL, data migration, or a related technical discipline.

AI Data Engineer

New York, NY · Remote

$117K - $140K/yr

Position Summary The Data Engineer will play a crucial role in developing and fine-tuning data ... Experience with healthcare data and a good understanding of healthcare data standards (e.g., FHIR ...

Data Engineer

$117K - $140K/yr

Job Summary As a Data Engineer supporting the National Training and Support Program (NTSP) Quality ... Knowledge of VA or federal healthcare data standards (e.g., HL7, FHIR, CDW, Corporate Data ...

Data Engineer

$117K - $140K/yr

Job Summary As a Data Engineer supporting the National Training and Support Program (NTSP) Quality ... e.g., HL7, FHIR, CDW, Corporate Data Warehouse) and experience harmonizing clinical or ...

AI Data Engineer

Boston, MA · On-site +1

$124K - $149K/yr

Position Summary The Data Engineer will play a crucial role in developing and fine-tuning data ... Experience with healthcare data and a good understanding of healthcare data standards (e.g., FHIR ...

AI Data Engineer

Boston, MA · On-site +1

$124K - $149K/yr

Position Summary The Data Engineer will play a crucial role in developing and fine-tuning data ... Experience with healthcare data and a good understanding of healthcare data standards (e.g., FHIR ...

AI Data Engineer

New York, NY · On-site +1

$125K - $150K/yr

Position Summary The Data Engineer will play a crucial role in developing and fine-tuning data ... Experience with healthcare data and a good understanding of healthcare data standards (e.g., FHIR ...

AI Data Engineer

Boston, MA · Remote

$117K - $140K/yr

Position Summary The Data Engineer will play a crucial role in developing and fine-tuning data ... Experience with healthcare data and a good understanding of healthcare data standards (e.g., FHIR ...

Staff Data Engineer

$175K - $220K/yr

Staff Data Engineer This job is open to fully remote work ... Company Overview b.well is solving healthcare's fragmentation problem with our FHIR-based health ...

Senior Data Engineer

Memphis, TN · On-site

$103K - $139K/yr

Experience working with FHIR, HL7, and other healthcare data standards . * Familiarity with DevOps and CI/CD pipelines for data workflows. * Strong problem-solving skills and ability to work in an ...

Showing results 41-60

Fhir Data Engineer information

See salary details

$46K

$165K

$243.5K

How much do fhir data engineer jobs pay per year?

As of Sep 10, 2026, the average yearly pay for fhir data engineer in the United States is $165,018.00, according to ZipRecruiter salary data. Most workers in this role earn between $133,500.00 and $170,000.00 per year, depending on experience, location, and employer.

What is a FHIR data engineer?

A FHIR Data Engineer is a specialized data professional who designs, builds, and maintains systems that handle healthcare data using the FHIR (Fast Healthcare Interoperability Resources) standard. They work with healthcare organizations to ensure that data is stored, exchanged, and interpreted according to FHIR specifications, enabling interoperability between different healthcare IT systems. Their responsibilities often include data integration, API development, data mapping, and ensuring compliance with industry regulations. FHIR Data Engineers play a crucial role in improving healthcare data accessibility and supporting modern healthcare applications.

What are the key skills and qualifications needed to thrive as a FHIR data engineer?

To thrive as a FHIR Data Engineer, you need expertise in health data standards (particularly HL7 FHIR), strong programming skills (such as Python, Java, or C#), and a background in data integration or software engineering. Familiarity with tools like FHIR servers, RESTful APIs, cloud platforms (e.g., AWS, Azure), and relevant certifications (such as HL7 FHIR Proficiency) is typically required. Attention to detail, problem-solving ability, and strong communication skills are essential for navigating complex healthcare data and collaborating with cross-functional teams. These skills ensure accurate data exchange, compliance with healthcare regulations, and the successful implementation of interoperable health IT solutions.

What are some common challenges FHIR data engineers face when integrating healthcare data from multiple sources?

FHIR Data Engineers often encounter challenges related to data interoperability and standardization when working with healthcare data from disparate systems. They must address issues such as varying data formats, inconsistent terminologies, and incomplete or missing fields while mapping legacy data to FHIR standards. Effective collaboration with clinical informatics and IT teams is crucial to overcome these hurdles, ensure data quality, and maintain compliance with healthcare regulations. Adapting to evolving FHIR specifications and staying updated with industry best practices are also important aspects of the role.

What is the difference between Fhir Data Engineer vs Fhir Developer?

AspectFhir Data EngineerFhir Developer
CredentialsTypically requires data management, database, and healthcare IT certificationsOften holds software development or healthcare IT certifications
Work EnvironmentFocuses on data pipelines, integration, and infrastructure in healthcare settingsConcentrates on application development, FHIR resource implementation, and user interfaces
Employer & IndustryHealthcare providers, health IT companies, EHR vendorsHealthcare organizations, health IT firms, software vendors
Search & Comparison IntentUnderstanding data integration roles in healthcareFocusing on application development and FHIR resource customization

While both roles work within the healthcare IT ecosystem, Fhir Data Engineers primarily handle data pipelines, integration, and infrastructure, whereas Fhir Developers focus on creating and customizing FHIR resources and applications. The roles often overlap but serve different aspects of healthcare data management and software development.

What are popular job titles related to Fhir Data Engineer jobs?

For Fhir Data Engineer jobs, the most frequently searched job titles are:

Infographic showing various Fhir Data Engineer job openings in the United States as of September 2026, with employment types broken down into 1% Internship, 1% As Needed, 83% Full Time, 12% Part Time, and 3% Contract. Highlights an 85% Physical, 3% Hybrid, and 12% Remote job distribution, with an average salary of $165,018 per year, or $79.3 per hour.

Principal AI Engineer

Norristown, PA • On-site, Remote

MRO Corporation
Health Care and Social Assistance • 1 - 5K employees

Full-time

Medical, Dental, Vision, Life, Retirement

Re-posted 13 days ago


MRO Corp rating

8.1

Company rating: 8.1 out of 10

Based on 29 frontline employees who took The Breakroom Quiz

113th of 501 rated business services


Job description

Overview

As a Principal AI Engineer at MRO, you will own the technical vision and implementation of AI capabilities that power our healthcare software products. You will design and build production AI systems - RAG pipelines, LLM integrations, human-in-the-loop workflows, and model quality frameworks - while setting the engineering standards other teams build against. 

This is a hands-on technical leadership role. You will work closely with architecture, product, data engineering, and engineering teams to translate complex healthcare workflows into scalable, accurate, and compliant AI solutions. You bring deep AI/ML engineering experience, know how HIPAA applies to the systems you build, and have owned AI product quality end-to-end - not just contributed to it. 

Responsibilities

Prodigy Product AI Vision & Technical Ownership 

  • Own the end-to-end technical vision for MRO Prodigy's AI layer - a production system that uses RAG, generative AI, and structured data reasoning to automate answers to Healthcare Registry questionnaires. 
  • Define the AI roadmap for Prodigy, balancing near-term customer commitments against foundational capability investments that scale the product to enterprise maturity. 
  • Evaluate and make build/buy/integrate decisions for AI capabilities - foundation model selection, embedding strategies, retrieval architectures, and orchestration frameworks - and own the consequences of those decisions. 
  • Serve as the technical authority on all AI design decisions for Prodigy; produce architecture decision records, set standards, and ensure the architecture is defensible, auditable, and extensible. 

AI/ML Solution Architecture & Implementation 

 

  • Architect and evolve Prodigy's multi-modal retrieval pipeline, combining unstructured clinical document ingestion with structured EHR/FHIR data to surface accurate, citation-backed answers to registry questionnaire items. 
  • Design and refine the answer generation layer - prompt engineering, context construction, grounding strategies, and output formatting - ensuring generated answers are clinically accurate and audit-ready. 
  • Own the question routing and data source classification logic that maps registry questions to the right retrieval path, structured data field, or generation strategy. 
  • Build and maintain the answer validation and confidence scoring framework, defining the statistics and quality thresholds that govern when answers are auto-accepted versus routed for human review. 

Human-in-the-Loop & Model Improvement 

  • Stay hands-on and close to the work: run direct ideation and feedback loops with Prodigy's end users (abstractors, registry, and quality teams) and with production analytics and monitoring systems - turning real usage signals into prioritized improvements that demonstrably move value, not just model metrics. 
  • Evolve the feedback loop architecture that captures human corrections and routes them into continuous model improvement - ensuring Prodigy gets measurably better with every customer interaction. 
  • Define the evals framework for Prodigy: how accuracy is measured, how regression is detected, and what signals trigger retraining or prompt revision. 
  • Establish guardrails for hallucination detection and factual grounding specific to clinical registry use cases, where answer accuracy has direct downstream compliance implications. 

Cloud & Data Architecture 

  • Architect AI infrastructure across GCP (Vertex AI, BigQuery, Dataflow) and AWS (Bedrock), ensuring the pipeline is scalable, cost-efficient, and operationally observable. 
  • Collaborate with data engineering to maintain high-quality, well-governed clinical and FHIR data inputs; define feature engineering and chunking strategies that optimize retrieval precision. 
  • Define MLOps standards for Prodigy: model versioning, deployment gates, rollback procedures, drift monitoring, and audit trail requirements consistent with HIPAA compliance. 

Technical Leadership & Enablement 

  • Act as the AI technical mentor for the Prodigy squad and adjacent engineering teams - guiding developers on RAG patterns, LLM integration, responsible AI practices, and clinical data handling. 
  • Collaborate with Security and Compliance to ensure Prodigy's AI layer meets HIPAA requirements, including PHI handling in prompts, data residency, and model audit logging. 
  • Foster AI literacy across the broader engineering organization, helping teams understand when and how to apply AI safely in a regulated healthcare context. 
  • Partner with Product Management to translate registry workflow complexity and customer feedback into technically sound AI capability improvements. 
Qualifications

Education & Background 

  • Bachelor's in Computer Science, AI/ML, or related field; Master's or PhD preferred - or equivalent depth proven through shipped AI systems. 
  • Strong ML / data science / statistics theory foundation with the ability to read research, assess applicability, and execute. 

LLM Engineering & RAG 

  • Hands-on LLM integration: prompt engineering, grounding, citation, hallucination mitigation, and output validation at clinical accuracy standards. 
  • Experience with LangChain, LlamaIndex, or equivalent orchestration frameworks. 
  • Built confidence scoring and auto-acceptance thresholds that govern when answers route to human review. 
  • Designed human-in-the-loop feedback systems that capture corrections and feed them back into model improvement. 
  • Production experience building RAG pipelines - document ingestion, chunking, embedding model selection, vector store management, and retrieval evaluation. 

AI/ML Engineering & MLOps 

  • Full ML lifecycle ownership in production: versioning, deployment gates, drift monitoring, rollback, and audit trails. 
  • Strong Python and software engineering fundamentals - CI/CD, testing, code review. 
  • Hands-on with vector databases (pgvector, Pinecone, Weaviate, or equivalent) and hybrid search. 
  • Built evals frameworks that measure accuracy, precision, recall, and F1 to inform product decisioning

Cloud & Data Architecture 

  • Solid AWS and GCP experience: Bedrock, SageMaker, Vertex AI, BigQuery, Dataflow. 
  • Azure familiarity a plus. 
  • Experience building pipelines over mixed unstructured and structured data sources. 
  • FHIR/HL7 and clinical document format familiarity strongly preferred. 

 

Healthcare & Compliance 

  • Clinical NLP or healthcare AI experience - medical terminology, document structure, and regulated accuracy standards are not new territory. 
  • Prefer direct experience with clinical documentation and abstraction workflows 
  • Knows how HIPAA applies to AI systems specifically: PHI in prompts and embeddings, data residency, audit logging, de-identification. 
  • Familiar with AI governance in practice: bias detection, explainability, responsible AI in compliance-sensitive contexts. 

 

Technical Leadership 

  • Has owned AI technical vision before - not just contributed to it. 
  • Can write an ADR, set an engineering standard, and make it stick across teams. 
  • Communicates tradeoffs clearly to both engineers and non-technical stakeholders. 
  • Track record of mentoring engineers and raising AI maturity on a team. 

Total CompensationBase pay is one element of the total compensation package. Eligible employees may also receive an annual cash bonus and have access to a comprehensive benefits offering, including medical, dental, vision, life insurance, and a 401(k) plan.

Salary Range It is not typical for an individual to be hired at or near the top of the range. Individual pay may be influenced by factors such as skills, qualifications, experience, licensure, certifications, geographic location, and internal equity.

 

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Pay RangeUSD $180,000.00 - USD $200,000.00 /Yr.Employment Type: FULL_TIME

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