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Entry Level Protein Engineering Jobs (NOW HIRING)

Lab Technician

San Francisco, CA · On-site

$22.50 - $29.75/hr

... protein engineering expertise to unlock proprietary insights that are leveraged to generate ... If you are self-motivated, adaptable, and willing to constantly learn, this entry-level position is ...

Lab Technician

San Francisco, CA · On-site

$22.50 - $29.75/hr

... protein engineering expertise to unlock proprietary insights that are leveraged to generate ... If you are self-motivated, adaptable, and willing to constantly learn, this entry-level position is ...

Be Seen First

This entry-level position supports the purification and processing of biologic drug substances ... Collaborate with Manufacturing, Quality Assurance, Quality Control, and Engineering teams to ...

New

... protein and strain engineering. ATUM explores novel applications for synthetic genes and the ... This entry-level position is within our production group. The work includes following standard ...

PCR / qPCR * Protein purification and analysis * Cell culture and cell-based assays * Aseptic ... About Actalent Actalent is a global leader in engineering and sciences services and talent ...

Post Doc Res Assoc

Salt Lake City, UT · On-site

$65K - $73K/yr

... P1 - Entry Level Pro FLSA Code Administrative Patient Sensitive Job Code? No Standard Hours per ... Mitochondrial protein import, organelle proteostasis, or quality control. * Functional genomics:

... P1 - Entry Level Pro FLSA Code Administrative Patient Sensitive Job Code? No Standard Hours per ... Mitochondrial protein import, organelle proteostasis, or quality control. * Functional genomics:

... P1 - Entry Level Pro FLSA Code Administrative Patient Sensitive Job Code? No Standard Hours per ... Mitochondrial protein import, organelle proteostasis, or quality control. * Functional genomics:

Post Doc Res Assoc

Campus, IL · On-site

$65K - $73K/yr

... P1 - Entry Level Pro FLSA Code Administrative Patient Sensitive Job Code? No Standard Hours per ... Mitochondrial protein import, organelle proteostasis, or quality control. * Functional genomics:

Post Doc Res Assoc

Salt Lake City, UT · On-site

$65K - $73K/yr

... P1 - Entry Level Pro FLSA Code Administrative Patient Sensitive Job Code? No Standard Hours per ... Mitochondrial protein import, organelle proteostasis, or quality control. * Functional genomics:

Fermentation Scientist

Plymouth, MN · On-site

$50K - $80K/yr

In this role, you will perform entry level research on a multidisciplinary team to develop, plan ... Master's degree or other post-secondary degree in biochemical engineering, chemical engineering ...

Fermentation Scientist

Plymouth, MN · On-site

$50K - $80K/yr

In this role, you will perform entry level research on a multidisciplinary team to develop, plan ... Master's degree or other post-secondary degree in biochemical engineering, chemical engineering ...

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Entry Level Protein Engineering information

See salary details

$30K

$69.4K

$118K

How much do entry level protein engineering jobs pay per year?

As of Jul 15, 2026, the average yearly pay for entry level protein engineering in the United States is $69,362.00, according to ZipRecruiter salary data. Most workers in this role earn between $51,500.00 and $78,500.00 per year, depending on experience, location, and employer.

What is the difference between Entry Level Protein Engineering vs Entry Level Biochemical Technician?

AspectEntry Level Protein EngineeringEntry Level Biochemical Technician
Required CredentialsBachelor's in Biochemistry, Molecular Biology, or related fieldBachelor's in Biochemistry, Biology, or related field
Work EnvironmentResearch labs, biotech companies, pharmaceutical firmsLaboratories, research institutions, manufacturing facilities
Industry UsageBiotech, pharmaceuticals, research & developmentHealthcare, research, quality control

Both roles typically require a bachelor's degree in a related science field and involve laboratory work. Entry Level Protein Engineering focuses on designing and modifying proteins, often involving computational tools and molecular techniques. Entry Level Biochemical Technicians perform routine lab tests and support research activities. While both roles are foundational in biotech and research industries, protein engineering is more specialized in protein design, whereas biochemical technicians handle broader lab support tasks.

What are some typical projects or tasks that an entry-level protein engineer might work on within a biotech company?

As an entry-level protein engineer, you can expect to work on a variety of projects, such as designing and expressing protein variants, conducting mutagenesis experiments, and analyzing protein structure-function relationships. You may assist with routine laboratory tasks like preparing samples, running assays (such as SDS-PAGE or ELISA), and documenting experimental results. Collaboration is common; you'll often work closely with senior scientists, molecular biologists, and bioinformaticians to optimize proteins for specific applications or to troubleshoot experimental hurdles. This hands-on experience provides a solid foundation for future specialization and career advancement within the field.

What are the key skills and qualifications needed to thrive as an Entry Level Protein Engineer, and why are they important?

To thrive as an Entry Level Protein Engineer, you need a solid understanding of molecular biology, biochemistry, and protein structure, typically supported by a bachelor's or master's degree in a related field. Experience with laboratory techniques such as PCR, site-directed mutagenesis, and protein purification, as well as familiarity with software for protein modeling and analysis, is highly valued. Strong analytical thinking, attention to detail, and teamwork are crucial soft skills in this role. These skills and qualities are vital for accurately designing, modifying, and analyzing proteins to support research or product development goals.

What are entry level protein engineering jobs?

Entry level protein engineering jobs are positions designed for recent graduates or individuals with limited professional experience in the field of protein science. These roles typically involve assisting with laboratory experiments, analyzing protein structures, expressing and purifying proteins, and supporting senior scientists in research and development projects. Entry level protein engineers often work in biotechnology, pharmaceutical, or academic settings and may help develop new enzymes, therapeutics, or biomaterials. A background in biochemistry, molecular biology, or a related field is usually required, along with familiarity with laboratory techniques. These positions provide a foundation for growth and specialization within the broader field of protein engineering.
More about Entry Level Protein Engineering jobs
What are the most commonly searched types of Protein Engineering jobs? The most popular types of Protein Engineering jobs are:
What job categories do people searching Entry Level Protein Engineering jobs look for? The top searched job categories for Entry Level Protein Engineering jobs are:
Infographic showing various Entry Level Protein Engineering job openings in the United States as of July 2026, with employment types broken down into 33% Full Time, 33% Part Time, and 34% Contract. Highlights an 100% In-person job distribution, with an average salary of $69,362 per year, or $33.3 per hour.
Scientist - Protein Production

Scientist - Protein Production

Helix Biostructures

Indianapolis, IN • On-site

Full-time

Medical, Dental, Vision, Retirement

Posted 8 days ago


Job description

Salary:

Scientist Protein Production

Helix BioStructures, LLC (HBS) is a contract research organization (CRO) based in Indianapolis, Indiana, providing early drug discovery services to the biopharmaceutical industry. HBS maintains a full suite of services that encompass chemical & structural analysis, protein production, computational modeling, and design. HBSs core and most popular services are structural biology imaging techniques: X-ray Crystallography and Cryo-EM. HBS was founded in 2018 and has grown considerably. We are looking to add a Scientist focused on protein production to join our Indianapolis-based team.


Main Responsibilities


This scientist will support our protein production pipeline by expressing and purifying recombinant proteins in bacterial, insect, and mammalian systems; performing biophysical characterization to assess sample quality and stability; developing and optimizing expression and purification protocols; interfacing with our clients; and writing technical project reports. The scientist will also contribute to improving expression and purification methods to accelerate research processes.

Highly desirable hands-on experiences include:

(a) Experience in recombinant protein expression and purification across bacterial, insect, and mammalian cell lines.

(b) Use of biophysical and analytical techniques (e.g., SDS-PAGE, SEC, Western Blot, TSA, DLS, Mass Spectrometry, and others) to assess protein quality, purity, and stability.

This scientist will employ a range of experimental methods (biochemical, biophysical, and/or computational) to support our clients structure-based drug discovery, antibody discovery, and/or protein engineering. Accordingly, proficiency in recombinant protein expression and purification and a passion for generating high-quality, well-characterized protein reagents are essential. Any structural biology experience (X-ray crystallography or Cryo-EM) is a plus, but is not required for this role. The successful candidate will be a strong technical contributor who can execute reliably at the bench and collaborate with colleagues on multiple projects in parallel. This role is open to candidates ranging from entry-level to experienced scientists; the level of hire, scope, and degree of independence will be determined by the candidates experience and qualifications, with the opportunity to help drive discovery projects from inception through early development.

Additional Responsibilities

  • Express and purify proteins to target quality and yield within industrial timeframes.
  • Document experimental data and communicate research priorities, progress, and results with clients/project teams.
  • Provide technical and scientific input to project teams, with the scope of guidance to other members of the Protein Sciences group, scaling with seniority and experience.
  • The candidate will be responsible for timely updates on project statuses, reporting to their supervisor informally and to Helixs customers by formal report writing and oral presentations.

Required Qualifications

This position is open to candidates ranging from entry-level to experienced scientists. The qualifications below represent the minimum requirements for the role; the final level of hire will be determined based on the candidates experience and qualifications.


  • D. in biochemistry, biophysics, molecular biology, protein engineering, or a related field; OR a Masters degree with 25 years of relevant industrial experience; OR a Bachelors degree with 510 years of relevant industrial experience.
  • Demonstrated competency in recombinant protein expression and purification using bacterial, insect, and mammalian cell lines; hands-on experience across all three systems is strongly preferred.
  • Ability to generate and characterize milligram to gram quantities of high-quality protein reagents for downstream studies.
  • Experience with standard analytical and biophysical techniques (e.g., SDS-PAGE, SEC, Western Blot, TSA, DLS, Mass Spectrometry, and others) for assessing protein quality, purity, and stability during purification.
  • Strong written and oral communication skills.


Additional qualifications


  • Hands-on experience in engineering protein constructs and optimizing the production of protein targets for structural and functional studies.
  • Experience in structural biology is a plus but not required, including protein X-ray crystallography (sample assessment, crystallization, optimization, data collection, and structure determination/refinement) and familiarity with software such as Phenix, CCP4, Coot, and PyMOL.
  • Experience with protein engineering and/or design approaches.
  • Analysis, design, and/or computational approaches to investigate ligand-protein complexes.
  • Experience with Cryo-EM is a plus, especially grid vitrification and screening.
  • Excellent communication, interpersonal, and organizational skills.
  • Willingness to tackle challenging technical problems.

Location



This position is based in Indianapolis, Indiana, and does NOT offer a hybrid option. Interaction with external service vendors is also expected. Candidates must be authorized to work in the United States; Helix BioStructures does NOT provide visa sponsorship for this position.


Physical Requirements

Able to lift 30 lb objects with dimensions 30 inches in height and 18 inches in width.

Able to visualize microscopic objects under microscopes.

Non-standard work schedule, travel, and lab safety


Able to adhere to safe work practices and perform lab work with appropriate personal protective equipment, such as but not limited to safety goggles, facial mask, gloves, lab coat/ protective gowning, and closed-toe shoes. Able to work at flexible hours occasionally when performing time-sensitive experiments.

Other job details

  • Eligible for Relocation Package
  • Competitive Salary + annual bonus
  • Retirement (matching 401K)
  • Health/Dental/Vision Insurance
  • Company Apple Computer

Helix BioStructures, LLC is an equal opportunity employer, and we embrace the increasingly diverse world around us. Helix BioStructures, LLC prohibits unlawful discrimination based on race, color, religion, gender, sexual orientation, gender identity or expression, national origin or ancestry, age, disability, marital status, and veteran status.