1

Variant Analyst Jobs in California (NOW HIRING)

RMA Program Manager

Santa Clara, CA · On-site

$98K - $154K/yr

Experience with process intelligence platforms (e.g., process mining tools) for workflow discovery and variant analysis. * Familiarity with AI-assisted case management and Agent-Assist tooling ...

RMA Program Manager

Santa Clara, CA · On-site

$98K - $154K/yr

Experience with process intelligence platforms (e.g., process mining tools) for workflow discovery and variant analysis. * Familiarity with AI-assisted case management and Agent-Assist tooling ...

next page

Showing results 1-20

Variant Analyst information

See California salary details

$30.6K

$72.3K

$128.3K

How much do variant analyst jobs pay per year?

As of Jul 14, 2026, the average yearly pay for variant analyst in California is $72,302.00, according to ZipRecruiter salary data. Most workers in this role earn between $51,800.00 and $85,900.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive in the Variant Analyst position, and why are they important?

To thrive as a Variant Analyst, you need a solid background in genetics or molecular biology, experience in data analysis, and a relevant bachelor's or advanced degree. Familiarity with bioinformatics tools such as Variant Call Format (VCF) analysis software, genomic databases, and proficiency in scripting languages like Python or R is highly valued, as is certification in clinical genetics or genomics. Strong attention to detail, analytical thinking, and effective communication skills distinguish top candidates in this field. These skills and qualities ensure accurate variant interpretation, effective cross-functional collaboration, and meaningful contributions to diagnostics or research.

What are the typical daily responsibilities of a Variant Analyst?

A Variant Analyst typically spends their day analyzing genetic sequencing data to identify, classify, and interpret genetic variants of clinical or research significance. They utilize specialized bioinformatics software to process raw data, review scientific literature for evidence supporting variant classification, and document their findings in detailed reports. Collaboration is common, as analysts often work closely with laboratory geneticists, clinicians, and other members of a multidisciplinary team to ensure accurate and relevant results. Staying updated with the latest guidelines and advances in genomics is also an important part of the role.

What is a Variant Analyst job?

A Variant Analyst is a professional who analyzes genetic variations in DNA sequences to identify mutations associated with diseases or traits. They interpret sequencing data, use bioinformatics tools, and contribute to clinical or research-based genetic analyses. Their work helps in diagnosing genetic disorders, guiding treatment decisions, and advancing precision medicine.

What are the most commonly searched types of Variant Analyst jobs in California? The most popular types of Variant Analyst jobs in California are:
What are popular job titles related to Variant Analyst jobs in California? For Variant Analyst jobs in California, the most frequently searched job titles are:
What job categories do people searching Variant Analyst jobs in California look for? The top searched job categories for Variant Analyst jobs in California are:
What cities in California are hiring for Variant Analyst jobs? Cities in California with the most Variant Analyst job openings:
Bioinformatics Engineer, Variant

Bioinformatics Engineer, Variant

LatchBio

San Francisco, CA • On-site, Remote

Full-time

Re-posted 11 days ago


Job description

As molecular data generation and frontier model intelligence grows, new approaches to data analysis are needed across the biotech industry. Latch is building intelligent, high performance agents for biological data analysis, empowering over 5,000 scientists across 150+ R&D labs to handle data from instrument-to-insights.
We're seeking a BioEngineer for Genomics to join our genomics bench, working at the frontier of what artificial intelligence can achieve in biology.
About the Role
You will contribute to our technical approach to teaching agents how to understand and handle complex genomic data, working across end-to-end data analysis workflows from instrument outputs to real scientific decisions.
You will work as part of a team of software engineers and biologists building datasets to teach these agents to reason better across:
  • Sequencing QC → alignment & assembly
  • Variant calling & filtering
  • Clinical variant interpretation
  • Population genetics → algorithmic reasoning

Requirements
  • 5+ years hands-on experience with genomics or genetics data
  • Experience in drug mechanism of action studies using population genomics
  • Proficiency in Python and/or R

Compensation & Logistics
  • OTE 120k - 180k, performance based, based on individual's expertise
  • Free meals (lunch and dinner)
  • Waterfront office in China Basin, San Francisco
  • Full-time, in-person (can be remote)

LatchBio logo

About LatchBio

Sourced by ZipRecruiter

Industry

Biotechnology research and development

Company size

11 - 50 Employees

Headquarters location

San Francisco, CA, US

Year founded

2021

Social media