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System Engineer Ii Jobs in Boston, MA (NOW HIRING)

Waters Corporation

Systems Engineer II

Milford, MA · On-site

From early product ideation through system integration and launch, you will influence every stage of development-combining systems thinking, technical leadership, and practical engineering execution.

Ultra Maritime

Systems Engineer II

Braintree, MA · On-site

Ability to document and specify system and subsystem level requirements. * Experience working with ... Provide systems engineering leadership to a small group of systems or mixed discipline engineers.

Astrion

Senior System Engineer

Hanscom Air Force Base, MA · On-site

$125K - $140K/yr

Overview SENIOR SYSTEMS ENGINEER LOCATION: Hanscom AFB, MA SALARY RANGE: $125,000-$140,000 annually ... 2. Architecture Definition to design the capability's architecture while ensuring integration ...

Sick AG

Software Engineer II

Canton, MA · On-site

$103K - $141K/yr

The Software Engineer II plays a key role in designing, developing, testing, and supporting ... Employ advanced techniques-such as deep learning-to enhance system accuracy, robustness, and ...

Gentuity LLC

Senior System Engineer

Sudbury, MA · On-site

$120K - $160K/yr

Drive compliance testing strategy and execution for IEC 60601-1 electrical safety and IEC 60601-1-2 ... Lead communication with remote teams as Systems Engineering lead * Work effectively in cross ...

Gentuity

Senior System Engineer

Sudbury, MA · On-site

$109K - $149K/yr

Drive compliance testing strategy and execution for IEC 60601-1 electrical safety and IEC 60601-1-2 ... Lead communication with remote teams as Systems Engineering lead * Work effectively in cross ...

Gentuity

Senior System Engineer

Sudbury, MA · On-site

$109K - $149K/yr

Drive compliance testing strategy and execution for IEC 60601-1 electrical safety and IEC 60601-1-2 ... Lead communication with remote teams as Systems Engineering lead * Work effectively in cross ...

Textron

Systems Engineer II/III

Wilmington, MA

This role is in Textron System's Weapon Systems business area. Visit TextronSystems.com & Lycoming ... S. in engineering or related discipline with 2 years of related experience (Level II). * B.S. in ...

Textron

Systems Engineer II/III

Wilmington, MA · On-site

This role is in Textron System's Weapon Systems business area. Visit TextronSystems.com & Lycoming ... S. in engineering or related discipline with 2 years of related experience (Level II). * B.S. in ...

Textron

Systems Engineer II/III

Wilmington, MA · On-site

This role is in Textron System's Weapon Systems business area. Visit TextronSystems.com & Lycoming ... S. in engineering or related discipline with 2+ years of related experience (Level II). * B.S. in ...

HPR

Software Engineer II

Needham, MA · Hybrid

$81K - $197K/yr

As a Software Engineer II you will: * Utilize your expertise in low-level programming as we advance ... systems to process large amounts of high-throughput, low-latency network data * Be a key ...

Textron

Systems Engineer II/III

Wilmington, MA · On-site

This role is in Textron System's Weapon Systems business area. Visit TextronSystems.com & Lycoming ... Bachelor's degree in mechanical or aerospace engineering or related discipline with 2 years of ...

Textron

Systems Engineer II/III

Wilmington, MA · On-site

This role is in Textron System's Weapon Systems business area. Visit TextronSystems.com & Lycoming ... Bachelor's degree in mechanical or aerospace engineering or related discipline with 2 years of ...

Textron

Systems Engineer II/III

Wilmington, MA · On-site

This role is in Textron System's Weapon Systems business area. Visit TextronSystems.com & Lycoming ... Bachelor's degree in mechanical or aerospace engineering or related discipline with 2+ years of ...

Raytheon Technologies

Software Safety Engineer II

Tewksbury, MA · On-site

$105K - $143K/yr

... Safety Engineer II to join the Land & Air Defense Systems (LADS) System Safety team in Tewksbury ... This role on the LADS System Safety team involves contributing to these key areas by ensuring the ...

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Showing results 21-40

All JobsSystem Engineer Ii JobsSystem Engineer Ii Jobs in Boston, MA

System Engineer Ii information

See Boston, MA salary details

$58.1K

$138.2K

$181.4K

How much do system engineer ii jobs pay per year?

As of Sep 1, 2026, the average yearly pay for system engineer ii in Boston, MA is $138,206.00, according to ZipRecruiter salary data. Most workers in this role earn between $106,500.00 and $170,600.00 per year, depending on experience, location, and employer.

What does a system engineer II do?

A System Engineer II is responsible for designing, implementing, and maintaining computer systems and networks within an organization. They work on complex technical projects, troubleshoot issues, and ensure that systems run efficiently and securely. Typically, this role requires a few years of experience and involves collaborating with other IT professionals to support the organization’s technology infrastructure. System Engineer IIs may also help with system upgrades, documentation, and user support.

What are the key skills and qualifications needed to thrive as a system engineer II, and why are they important?

To thrive as a System Engineer II, you typically need a solid background in systems administration, troubleshooting, and network fundamentals, often supported by a bachelor's degree in computer science or a related field. Familiarity with operating systems (Windows/Linux), virtualization platforms, cloud services, and certifications such as CompTIA, Microsoft, or AWS are highly valued. Strong problem-solving, communication, and teamwork skills help individuals excel in managing complex IT environments and collaborating with cross-functional teams. These competencies are crucial for ensuring system reliability, efficient incident resolution, and supporting organizational technology goals.

What are some common challenges system engineer II professionals face when managing complex IT infrastructures?

System Engineer II professionals often encounter challenges such as integrating diverse systems, keeping up with evolving technologies, and ensuring consistent system reliability. They are frequently tasked with troubleshooting unexpected issues, maintaining cybersecurity standards, and optimizing resource allocation within the infrastructure. Collaboration with cross-functional teams is essential, as they must coordinate with network, software, and security teams to deliver seamless and secure IT services.

What is the difference between System Engineer Ii vs Network Engineer?

AspectSystem Engineer IiNetwork Engineer
Required CertificationsCompTIA Network+, Cisco CCNA, Microsoft certificationsCompTIA Network+, Cisco CCNA, Juniper JNCIA
Work EnvironmentIT departments, data centers, enterprise environmentsNetwork operations centers, enterprise networks, service providers
Employer & Industry UsageTech companies, large corporations, government agenciesTelecommunications, ISPs, large enterprises
Common Search & Comparison IntentUnderstanding roles, career progression, required skillsNetwork infrastructure, troubleshooting, network design

The System Engineer II and Network Engineer roles share certifications like Cisco CCNA and work in similar enterprise environments. However, System Engineer II focuses on overall system infrastructure, servers, and software, while Network Engineers specialize in designing, implementing, and maintaining network systems. Both roles are essential in IT operations but differ in their technical focus and daily responsibilities.

What are popular job titles related to System Engineer Ii jobs in Boston, MA?

For System Engineer Ii jobs in Boston, MA, the most frequently searched job titles are:

What job categories do people searching System Engineer Ii jobs in Boston, MA look for?

The top searched job categories for System Engineer Ii jobs in Boston, MA are:

System Engineer Ii jobs near you
Infographic showing various System Engineer Ii job openings in Boston, MA as of August 2026, with employment types broken down into 1% As Needed, 83% Full Time, 13% Part Time, and 3% Contract. Highlights an 91% Physical, 2% Hybrid, and 7% Remote job distribution, with an average salary of $138,206 per year, or $66.4 per hour.

Systems Engineer II

Waters Corporation

Milford, MA • On-site

Other

Re-posted 4 hours ago

Job description

Overview
Systems Mechanical Engineer Next Generation Liquid Chromatography (NGLC) Systems Group
Join a team at the forefront of innovation in analytical science and help define the future of liquid chromatography.
As a Systems Engineer within the Next Generation Liquid Chromatography (NGLC) Systems Group, you will play a pivotal role in the creation of industry-leading chromatography solutions that advance scientific discovery, pharmaceutical development, and quality assurance worldwide. Working at the intersection of customer needs, business strategy, and technology innovation, you will help transform bold product concepts into commercially successful products that set new standards for performance, usability, connectivity, and customer value.
This highly collaborative and hands-on role requires a versatile engineer who thrives in multidisciplinary environments. You will work closely with Product Management, Marketing, Software, Electrical, Mechanical, Quality, Regulatory, Service, Manufacturing, and Commercial teams to define product capabilities, develop system requirements, guide technical decision-making, and verify that innovative solutions deliver exceptional customer outcomes.
From early product ideation through system integration and launch, you will influence every stage of development-combining systems thinking, technical leadership, and practical engineering execution. Whether defining next-generation workflows, developing system architectures, executing hands-on testing, or solving complex integration challenges, you will play a key role in bringing breakthrough technologies to market.
This is a unique opportunity to shape the future of liquid chromatography while working alongside some of the industry's leading scientists, engineers, and product innovators.
Responsibilities
  • Collaborate with Product Management, Marketing, and Engineering teams to define next-generation liquid chromatography products and customer solutions.
  • Translate customer, business, and market needs into clear, testable, and traceable system requirements.
  • Develop and maintain system requirements, product requirements, interface definitions, and traceability documentation throughout the product development lifecycle.
  • Partner with software, electrical, mechanical, scientific, and manufacturing teams to develop innovative system-level solutions.
  • Support system architecture development and technical decision-making by evaluating design alternatives, tradeoffs, and risks.
  • Lead cross-functional discussions to align requirements, resolve technical challenges, and drive project execution.
  • Develop system verification and validation strategies, test plans, and acceptance criteria.
  • Perform hands-on testing, integration, troubleshooting, and performance characterization of prototype and production systems.
  • Investigate system-level issues, perform root cause analysis, and drive corrective actions to resolution.
  • Support risk management activities by identifying technical risks and developing mitigation strategies.
  • Promote systems engineering best practices including requirements management, systems integration, design verification, and traceability.
  • Provide technical leadership within project teams and mentor junior engineers in systems engineering methodologies.
  • Support successful commercialization of industry-leading chromatography solutions from concept through product launch.

Qualifications
  • Bachelor's degree in Systems Engineering, Mechanical Engineering, Electrical Engineering, Biomedical Engineering, Chemical Engineering, Computer Science, Software Engineering, Physical Sciences, Chemistry, or a related technical discipline.
  • 3+ years of experience in systems engineering, product development, analytical instrumentation, or multidisciplinary engineering environments.
  • Demonstrated experience developing complex hardware and software products from concept through commercialization.
  • Experience translating customer needs and business objectives into system requirements and product capabilities.
  • Experience working across multiple engineering disciplines, including software, electrical, mechanical, and scientific teams.
  • Strong understanding of systems engineering principles, including requirements development, requirements decomposition, traceability, integration, verification, validation, and risk management.
  • Experience planning and executing system-level testing and troubleshooting activities.
  • Excellent problem-solving and root-cause analysis skills.
  • Strong written, verbal, and interpersonal communication skills with the ability to effectively collaborate across organizational boundaries.
  • Demonstrated ability to lead technical initiatives and influence outcomes without direct authority.
Preferred Qualifications
  • Master's degree in Engineering, Computer Science, Physical Sciences, Chemistry, Biomedical Engineering, or a related technical field.
  • Direct experience designing, developing, integrating, servicing, supporting, or operating HPLC, UHPLC, liquid chromatography, mass spectrometry, or other analytical instrumentation platforms strongly preferred.
  • Strong understanding of chromatography workflows, laboratory operations, and customer applications in pharmaceutical, biopharmaceutical, chemical, food, environmental, or clinical markets.
  • Experience developing complex electromechanical products involving fluidics, sensors, automation, software, firmware, and data systems.
  • Experience with system architecture, technology development, and new product introduction activities.
  • Familiarity with cybersecurity, connectivity, cloud-enabled products, laboratory informatics, and data management platforms.
  • Experience with Design Controls, Risk Management, Verification & Validation, and regulated product development processes.
  • Experience using requirements management and systems engineering tools such as Jama, DOORS, Polarion, Azure DevOps, or equivalent.
  • Experience mentoring engineers and leading cross-functional technical activities.
  • Knowledge of liquid chromatography system design considerations such as solvent delivery, sample management, detector technologies, thermal management, and laboratory workflow integration is a plus+

Company Description
Waters Corporation (NYSE:WAT) is a global leader in life sciences and diagnostics, dedicated to accelerating the benefits of pioneering science through analytical technologies, informatics, and service. With a focus on regulated, high-volume testing environments, our innovative portfolio harnesses deep scientific expertise across chemistry, physics, and biology. We collaborate with customers around the world to advance the release of effective, high-quality medicines, ensure the safety of food and water, and drive better patient outcomes by detecting diseases earlier, managing routine infections, and combating antibiotic resistance. Through a shared culture of relentless innovation, our passionate team of ~16,000 colleagues turn scientific challenges into breakthroughs that improve lives worldwide.
Diversity and inclusion are fundamental to our core values at Waters Corporation. It benefits our employees, our products, our customers and our community. Waters complies with all applicable federal, state, and local laws. Qualified applicants are considered without regard to sex, race, color, ancestry, national origin, citizenship status, religion, age, marital status (including civil unions), military service, veteran status, pregnancy (including childbirth and related medical conditions), genetic information, sexual orientation, gender identity, legally recognized disability, domestic violence victim status, or any other characteristic protected by law. Waters is proud to be an equal opportunity workplace and is an affirmative action employer. All hiring decisions are based solely on qualifications, merit, and business needs at the time.
Key Words
#SystemsEngineering
#ProductDevelopment
#SystemArchitecture
#RequirementsEngineering
#System Integration
#Verification
#Validation
Cross-Functional Leadership
Technical Leadership
#HPLC
#UHPLC
#LiquidChromatography
Analytical Instrumentation
Laboratory Automation
Fluidics
New Product Development

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