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Single Cell Transcriptomics Phd Machine Learning Jobs

Bioinformatician II

Durham, NC · On-site

$94K - $150K/yr

Experience with single-cell and/or spatial transcriptomics analysis * Familiarity with multi-omics ... Experience applying machine learning or statistical modeling to biological datasets * Experience ...

Bioinformatician II

Durham, NC · On-site

$94K - $150K/yr

Experience with single-cell and/or spatial transcriptomics analysis * Familiarity with multi-omics ... Experience applying machine learning or statistical modeling to biological datasets * Experience ...

Postdoctoral Fellow, Single-Cell Genomics

Chicago, IL · On-site

$50K - $68K/yr

PhD in genomics, bioengineering, quantitative biology, systems immunology, computational biology ... transcriptomics, multiplexed imaging, flow/mass cytometry, or proteomics). * [Nice to have ...

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How much do single cell transcriptomics phd machine learning jobs pay per hour?

As of Jun 6, 2026, the average hourly pay for single cell transcriptomics phd machine learning in the United States is $21.64, according to ZipRecruiter salary data. Most workers in this role earn between $16.83 and $27.16 per hour, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a Single Cell Transcriptomics PhD Machine Learning specialist, and why are they important?

To excel in this role, you need advanced knowledge in computational biology, single-cell transcriptomics, and machine learning, typically supported by a PhD in bioinformatics, computational biology, or a related field. Proficiency with programming languages such as Python or R, experience using tools like Seurat or Scanpy, and familiarity with high-performance computing environments are essential. Strong analytical thinking, problem-solving abilities, and effective communication skills distinguish top performers in this field. These competencies are vital for extracting meaningful biological insights from complex datasets and collaborating across interdisciplinary research teams.

What are some common challenges faced when applying machine learning techniques to single cell transcriptomics data?

One of the primary challenges in this role is dealing with the high dimensionality and sparsity of single cell transcriptomics data, which can complicate model training and interpretation. Additionally, integrating data from multiple experiments or platforms often introduces batch effects that need to be corrected for accurate analysis. Collaborating closely with both wet-lab biologists and computational team members is essential to ensure that the developed machine learning models are biologically meaningful and robust. Staying current with rapidly evolving tools and methodologies is also important for success in this interdisciplinary field.

What is the difference between Single Cell Transcriptomics Phd Machine Learning vs Single Cell Data Analyst?

AspectSingle Cell Transcriptomics Phd Machine LearningSingle Cell Data Analyst
Required CredentialsPhD in Bioinformatics, Computational Biology, or related field; expertise in machine learningBachelor's or Master's in Data Science, Biology, or related field; experience with data analysis
Work EnvironmentResearch labs, biotech companies, academic institutionsHealthcare, biotech, research organizations
Industry UsageDeveloping algorithms for single-cell data interpretationAnalyzing and visualizing single-cell datasets for insights

The Single Cell Transcriptomics Phd Machine Learning role focuses on developing advanced algorithms using machine learning techniques to interpret single-cell data, often requiring a PhD. In contrast, a Single Cell Data Analyst primarily handles data analysis and visualization tasks, typically with a bachelor's or master's degree. Both roles operate in research and biotech environments but differ in technical depth and responsibilities.

What is a Single Cell Transcriptomics PhD with a focus on Machine Learning?

A Single Cell Transcriptomics PhD with a focus on Machine Learning is a doctoral program or research position that combines advanced studies in single cell transcriptomics—the analysis of gene expression at the single-cell level—with the development and application of machine learning techniques. Researchers in this field work to unravel the complexity of cell populations by analyzing large-scale data generated from single-cell sequencing experiments. They use machine learning algorithms to identify patterns, classify cell types, and infer cellular functions or developmental trajectories. This interdisciplinary field is crucial for understanding biological processes, disease mechanisms, and for developing personalized medicine strategies.
Infographic showing various Single Cell Transcriptomics Phd Machine Learning job openings in the United States as of May 2026, with employment types broken down into 75% Part Time, and 25% Temporary. Highlights an 93% Physical, 1% Hybrid, and 6% Remote job distribution, with an average salary of $45,021 per year, or $21.6 per hour.
Postdoctoral Fellow-MSH-13400-339

Postdoctoral Fellow-MSH-13400-339

Mount Sinai Health System

Manhattan, NY • On-site

$53K - $73K/yr

Full-time

Posted 19 days ago


Mount Sinai rating

7.8

Company rating: 7.8 out of 10

Based on 280 frontline employees who took The Breakroom Quiz

131st of 867 rated healthcare providers


Job description

Postdoctoral Fellow 

Seaver Autism Center for Research and Treatment

Department of Psychiatry

Icahn School of Medicine at Mount Sinai

Position Overview: 

The team of Xuran Wang, PhD, at the Seaver Autism Center for Research and Treatment in the Department of Psychiatry at the Icahn School of Medicine at Mount Sinai in New York, is seeking a motivated, creative, and dynamic postdoctoral fellow with expertise in biostatistics/bioinformatics to study the single-cell transcriptomics and multi-omics data with a focus on method development for neuropsychiatric diseases, such as autism spectrum disorder (ASD). 

Research Focus: 

Dr. Wang's research bridges statistical genomics, computational biology, and neuroscience. The lab is committed to developing and applying advanced statistical, computational, and machine-learning methods to decode genomic, transcriptomic, and phenotypic data. Current projects include methodological advancements for single-cell CRISPR data and spatial transcriptomics.

For more about our scientific interests and publications, please visit Dr. Wang's Research page: https://xuranw.github.io/.

Appointment Details:

  • Term: 1-year initial appointment starting January 1, 2025, with a strong preference for renewal up to an additional 1-2 years, contingent upon performance and availability of funding.
  • Location: Icahn School of Medicine at Mount Sinai, 1399 Park Avenue, Manhattan, New York. 

Preferred Qualifications:

  • Experience in genetics, genomics, and psychiatric disorder data analysis. 

Research Opportunities:

  • Conduct cutting-edge research with a strong translational impact on neurodevelopmental disorders.
  • Learn and conduct research with novel statistical and computational algorithms.
  • Engage with the vibrant and exciting research community of the Seaver Center and the Icahn School of Medicine at Mount Sinai.

Application Process:

Please send a cover letter detailing your research interests, CV, and contact information for three references to Dr. Wang at xuran.wang@mssm.edu

Qualifications:

  • PhD in Statistics, Biostatistics, Bioinformatics, Computational Biology, Applied Mathematics, or equivalent quantitative field. 
  • Demonstrated programming expertise (R, Python, etc.).
  • Strong record of publications in peer-reviewed journals.
  • Excellent Communication skills.
  • Ability to collaborate in an interdisciplinary setting.

Strength through Unity and Inclusion

The Mount Sinai Health System is committed to fostering an environment where everyone can contribute to excellence. We share a common dedication to delivering outstanding patient care. When you join us, you become part of Mount Sinai's unparalleled legacy of achievement, education, and innovation as we work together to transform healthcare. We encourage all team members to actively participate in creating a culture that ensures fair access to opportunities, promotes inclusive practices, and supports the success of every individual.

At Mount Sinai, our leaders are committed to fostering a workplace where all employees feel valued, respected, and empowered to grow. We strive to create an environment where collaboration, fairness, and continuous learning drive positive change, improving the well-being of our staff, patients, and organization. Our leaders are expected to challenge outdated practices, promote a culture of respect, and work toward meaningful improvements that enhance patient care and workplace experiences. We are dedicated to building a supportive and welcoming environment where everyone has the opportunity to thrive and advance professionally. Explore this opportunity and be part of the next chapter in our history.

About the Mount Sinai Health System:

Mount Sinai Health System is one of the largest academic medical systems in the New York metro area, with more than 48,000 employees working across eight hospitals, more than 400 outpatient practices, more than 300 labs, a school of nursing, and a leading school of medicine and graduate education. Mount Sinai advances health for all people, everywhere, by taking on the most complex health care challenges of our time - discovering and applying new scientific learning and knowledge; developing safer, more effective treatments; educating the next generation of medical leaders and innovators; and supporting local communities by delivering high-quality care to all who need it. Through the integration of its hospitals, labs, and schools, Mount Sinai offers comprehensive health care solutions from birth through geriatrics, leveraging innovative approaches such as artificial intelligence and informatics while keeping patients' medical and emotional needs at the center of all treatment. The Health System includes more than 9,000 primary and specialty care physicians; 13 joint-venture outpatient surgery centers throughout the five boroughs of New York City, Westchester, Long Island, and Florida; and more than 30 affiliated community health centers. We are consistently ranked by U.S. News & World Report's Best Hospitals, receiving high "Honor Roll" status, and are highly ranked: No. 1 in Geriatrics, top 5 in Cardiology/Heart Surgery, and top 20 in Diabetes/Endocrinology, Gastroenterology/GI Surgery, Neurology/Neurosurgery, Orthopedics, Pulmonology/Lung Surgery, Rehabilitation, and Urology. New York Eye and Ear Infirmary of Mount Sinai is ranked No. 12 in Ophthalmology. U.S. News & World Report's "Best Children's Hospitals" ranks Mount Sinai Kravis Children's Hospital among the country's best in several pediatric specialties. The Icahn School of Medicine at Mount Sinai is ranked No. 11 nationwide in National Institutes of Health funding and in the 99th percentile in research dollars per investigator according to the Association of American Medical Colleges. Newsweek's "The World's Best Smart Hospitals" ranks The Mount Sinai Hospital as No. 1 in New York and in the top five globally, and Mount Sinai Morningside in the top 20 globally.

Equal Opportunity Employer

The Mount Sinai Health System is an equal opportunity employer, complying with all applicable federal civil rights laws. We do not discriminate, exclude, or treat individuals differently based on race, color, national origin, age, religion, disability, sex, sexual orientation, gender, veteran status, or any other characteristic protected by law. We are deeply committed to fostering an environment where all faculty, staff, students, trainees, patients, visitors, and the communities we serve feel respected and supported. Our goal is to create a healthcare and learning institution that actively works to remove barriers, address challenges, and promote fairness in all aspects of our organization.

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Qualifications:

  • PhD in Statistics, Biostatistics, Bioinformatics, Computational Biology, Applied Mathematics, or equivalent quantitative field. 
  • Demonstrated programming expertise (R, Python, etc.).
  • Strong record of publications in peer-reviewed journals.
  • Excellent Communication skills.
  • Ability to collaborate in an interdisciplinary setting.

Compensation Statement

The Mount Sinai Health System (MSHS) provides salary ranges that comply with the New York City Law on Salary Transparency in Job Advertisements. The salary range for this role is $72,500.00 - $80,000.00 Annually. Actual salaries depend on a variety of factors, including experience, education, and operational need. The salary range or contractual rate listed does not include bonuses/incentive, differential pay or other forms of compensation or benefits.

Preferred Qualifications:

  • Experience in genetics, genomics, and psychiatric disorder data analysis. 

Research Opportunities:

  • Conduct cutting-edge research with a strong translational impact on neurodevelopmental disorders.
  • Learn and conduct research with novel statistical and computational algorithms.
  • Engage with the vibrant and exciting research community of the Seaver Center and the Icahn School of Medicine at Mount Sinai.

Application Process:

Please send a cover letter detailing your research interests, CV, and contact information for three references to Dr. Wang at xuran.wang@mssm.edu  

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